EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013644 (Gene tree)
Gene ID: 102793493
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1716 bases
Position: chrJH422352.1:382733-384448
Accession: 102793493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017672	RRM_1	PF00076.22	9e-23	1	2
ENSNBRP00000017672	RRM_1	PF00076.22	9e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018150	-	1716	XM_006801316	ENSNBRP00000017672	571 (aa)	XP_006801379	UPI0003EBB9BE

Gene Model

Click here to download ENSNBRG00000013644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013644	zgc:153215	81	43.750	ENSNBRG00000015057	rbm12b	74	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013644	zgc:153215	77	48.750	ENSAPOG00000013963	rbm12b	74	48.750	Acanthochromis_polyacanthus
ENSNBRG00000013644	zgc:153215	80	76.000	ENSAPOG00000008836	zgc:153215	95	76.000	Acanthochromis_polyacanthus
ENSNBRG00000013644	zgc:153215	99	66.667	ENSACIG00000013317	zgc:153215	99	66.667	Amphilophus_citrinellus
ENSNBRG00000013644	zgc:153215	79	46.591	ENSACIG00000014943	rbm12b	97	46.591	Amphilophus_citrinellus
ENSNBRG00000013644	zgc:153215	81	42.202	ENSAOCG00000024270	rbm12b	74	42.202	Amphiprion_ocellaris
ENSNBRG00000013644	zgc:153215	81	75.000	ENSAOCG00000010819	zgc:153215	99	51.478	Amphiprion_ocellaris
ENSNBRG00000013644	zgc:153215	81	42.202	ENSAPEG00000022079	rbm12b	67	42.202	Amphiprion_percula
ENSNBRG00000013644	zgc:153215	82	44.340	ENSATEG00000004578	rbm12b	73	44.340	Anabas_testudineus
ENSNBRG00000013644	zgc:153215	100	58.532	ENSATEG00000001886	zgc:153215	99	58.532	Anabas_testudineus
ENSNBRG00000013644	zgc:153215	100	85.639	ENSACLG00000007675	zgc:153215	100	85.639	Astatotilapia_calliptera
ENSNBRG00000013644	zgc:153215	83	43.750	ENSACLG00000005575	rbm12b	72	43.750	Astatotilapia_calliptera
ENSNBRG00000013644	zgc:153215	61	36.806	ENSACLG00000005578	rbm12b	57	36.806	Astatotilapia_calliptera
ENSNBRG00000013644	zgc:153215	95	38.649	ENSAMXG00000020853	zgc:153215	99	33.643	Astyanax_mexicanus
ENSNBRG00000013644	zgc:153215	78	43.750	ENSCSEG00000004610	rbm12b	63	43.750	Cynoglossus_semilaevis
ENSNBRG00000013644	zgc:153215	76	41.972	ENSCSEG00000001575	-	99	41.972	Cynoglossus_semilaevis
ENSNBRG00000013644	zgc:153215	85	62.069	ENSCVAG00000009259	-	99	62.069	Cyprinodon_variegatus
ENSNBRG00000013644	zgc:153215	99	36.627	ENSDARG00000055889	zgc:153215	99	36.364	Danio_rerio
ENSNBRG00000013644	zgc:153215	77	43.750	ENSETEG00000013005	-	55	43.750	Echinops_telfairi
ENSNBRG00000013644	zgc:153215	100	40.065	ENSELUG00000009039	zgc:153215	97	39.428	Esox_lucius
ENSNBRG00000013644	zgc:153215	72	67.033	ENSFHEG00000014539	zgc:153215	95	67.033	Fundulus_heteroclitus
ENSNBRG00000013644	zgc:153215	79	44.565	ENSGMOG00000013467	rbm12b	74	44.565	Gadus_morhua
ENSNBRG00000013644	zgc:153215	98	45.088	ENSGAFG00000007845	zgc:153215	98	45.088	Gambusia_affinis
ENSNBRG00000013644	zgc:153215	81	38.679	ENSGACG00000008682	rbm12b	72	38.679	Gasterosteus_aculeatus
ENSNBRG00000013644	zgc:153215	83	42.708	ENSHBUG00000016227	rbm12b	72	42.708	Haplochromis_burtoni
ENSNBRG00000013644	zgc:153215	100	97.548	ENSHBUG00000016150	zgc:153215	100	97.548	Haplochromis_burtoni
ENSNBRG00000013644	zgc:153215	100	35.172	ENSIPUG00000019731	zgc:153215	99	35.172	Ictalurus_punctatus
ENSNBRG00000013644	zgc:153215	82	41.667	ENSKMAG00000013704	rbm12b	72	36.697	Kryptolebias_marmoratus
ENSNBRG00000013644	zgc:153215	99	46.690	ENSKMAG00000004958	zgc:153215	99	46.690	Kryptolebias_marmoratus
ENSNBRG00000013644	zgc:153215	82	44.048	ENSKMAG00000013715	rbm12b	74	38.532	Kryptolebias_marmoratus
ENSNBRG00000013644	zgc:153215	86	76.250	ENSLBEG00000002597	zgc:153215	99	54.021	Labrus_bergylta
ENSNBRG00000013644	zgc:153215	99	30.541	ENSLOCG00000018344	rbm12b	74	30.890	Lepisosteus_oculatus
ENSNBRG00000013644	zgc:153215	81	43.396	ENSMAMG00000011998	rbm12b	74	43.396	Mastacembelus_armatus
ENSNBRG00000013644	zgc:153215	100	56.775	ENSMAMG00000012038	zgc:153215	99	56.775	Mastacembelus_armatus
ENSNBRG00000013644	zgc:153215	83	43.750	ENSMZEG00005015005	rbm12b	74	43.750	Maylandia_zebra
ENSNBRG00000013644	zgc:153215	100	97.023	ENSMZEG00005005435	zgc:153215	100	97.023	Maylandia_zebra
ENSNBRG00000013644	zgc:153215	76	45.455	ENSMZEG00005014845	rbm12b	70	45.455	Maylandia_zebra
ENSNBRG00000013644	zgc:153215	79	45.349	ENSMOCG00000005603	-	50	45.349	Microtus_ochrogaster
ENSNBRG00000013644	zgc:153215	81	42.045	ENSMMOG00000002404	rbm12b	69	42.045	Mola_mola
ENSNBRG00000013644	zgc:153215	85	56.489	ENSMMOG00000003372	zgc:153215	99	56.489	Mola_mola
ENSNBRG00000013644	zgc:153215	99	49.476	ENSMALG00000001222	zgc:153215	99	49.476	Monopterus_albus
ENSNBRG00000013644	zgc:153215	78	46.429	ENSMALG00000012059	rbm12b	73	46.429	Monopterus_albus
ENSNBRG00000013644	zgc:153215	99	88.869	ENSONIG00000006054	zgc:153215	100	88.869	Oreochromis_niloticus
ENSNBRG00000013644	zgc:153215	81	46.591	ENSONIG00000020612	rbm12b	74	46.591	Oreochromis_niloticus
ENSNBRG00000013644	zgc:153215	85	39.640	ENSOCUG00000010353	RBM12B	52	39.640	Oryctolagus_cuniculus
ENSNBRG00000013644	zgc:153215	78	47.619	ENSORLG00000008228	rbm12b	72	47.619	Oryzias_latipes
ENSNBRG00000013644	zgc:153215	78	47.619	ENSORLG00020013619	rbm12b	72	47.619	Oryzias_latipes_hni
ENSNBRG00000013644	zgc:153215	78	47.619	ENSORLG00015019999	rbm12b	72	47.619	Oryzias_latipes_hsok
ENSNBRG00000013644	zgc:153215	79	67.073	ENSOMEG00000004220	zgc:153215	92	67.391	Oryzias_melastigma
ENSNBRG00000013644	zgc:153215	77	47.619	ENSOMEG00000022523	rbm12b	71	47.619	Oryzias_melastigma
ENSNBRG00000013644	zgc:153215	99	33.857	ENSPKIG00000014851	zgc:153215	99	33.857	Paramormyrops_kingsleyae
ENSNBRG00000013644	zgc:153215	99	53.435	ENSPFOG00000017451	zgc:153215	97	53.435	Poecilia_formosa
ENSNBRG00000013644	zgc:153215	84	51.818	ENSPLAG00000000232	zgc:153215	99	51.818	Poecilia_latipinna
ENSNBRG00000013644	zgc:153215	91	53.153	ENSPMEG00000016662	zgc:153215	99	53.153	Poecilia_mexicana
ENSNBRG00000013644	zgc:153215	99	44.464	ENSPREG00000018608	zgc:153215	99	44.464	Poecilia_reticulata
ENSNBRG00000013644	zgc:153215	81	95.745	ENSPNYG00000018125	zgc:153215	97	95.745	Pundamilia_nyererei
ENSNBRG00000013644	zgc:153215	83	43.750	ENSPNYG00000016696	rbm12b	74	43.750	Pundamilia_nyererei
ENSNBRG00000013644	zgc:153215	99	35.112	ENSPNAG00000025628	zgc:153215	99	35.112	Pygocentrus_nattereri
ENSNBRG00000013644	zgc:153215	100	35.751	ENSSFOG00015009427	zgc:153215	99	35.751	Scleropages_formosus
ENSNBRG00000013644	zgc:153215	86	65.934	ENSSMAG00000019013	zgc:153215	94	65.934	Scophthalmus_maximus
ENSNBRG00000013644	zgc:153215	81	40.566	ENSSDUG00000006856	rbm12b	74	40.566	Seriola_dumerili
ENSNBRG00000013644	zgc:153215	100	55.190	ENSSDUG00000012545	zgc:153215	99	55.190	Seriola_dumerili
ENSNBRG00000013644	zgc:153215	100	61.026	ENSSLDG00000013581	zgc:153215	99	61.026	Seriola_lalandi_dorsalis
ENSNBRG00000013644	zgc:153215	81	40.566	ENSSLDG00000016156	rbm12b	74	40.566	Seriola_lalandi_dorsalis
ENSNBRG00000013644	zgc:153215	85	60.684	ENSSPAG00000023584	zgc:153215	98	60.684	Stegastes_partitus
ENSNBRG00000013644	zgc:153215	77	47.500	ENSSPAG00000006774	rbm12b	74	47.500	Stegastes_partitus
ENSNBRG00000013644	zgc:153215	77	42.857	ENSTGUG00000011860	RBM12B	81	42.857	Taeniopygia_guttata
ENSNBRG00000013644	zgc:153215	78	45.238	ENSTRUG00000013738	rbm12b	74	45.238	Takifugu_rubripes
ENSNBRG00000013644	zgc:153215	77	47.875	ENSTNIG00000018374	-	99	47.556	Tetraodon_nigroviridis
ENSNBRG00000013644	zgc:153215	78	39.535	ENSXETG00000014696	rbm12b	63	39.535	Xenopus_tropicalis
ENSNBRG00000013644	zgc:153215	82	36.709	ENSXETG00000025920	-	96	36.709	Xenopus_tropicalis
ENSNBRG00000013644	zgc:153215	99	44.599	ENSXCOG00000019654	zgc:153215	98	44.599	Xiphophorus_couchianus
ENSNBRG00000013644	zgc:153215	63	52.381	ENSXMAG00000013169	-	90	52.381	Xiphophorus_maculatus