EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000013701 (Gene tree)
Gene ID: 102794464
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: tristetraprolin-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3426 bases
Position: chrJH422360.1:1142959-1146384
Accession: 102794464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017753	zf-CCCH	PF00642.24	3.3e-21	1	2
ENSNBRP00000017753	zf-CCCH	PF00642.24	3.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018231	-	2923	XM_006802057	ENSNBRP00000017753	406 (aa)	XP_006802120	UPI0003EC341F

Gene Model

Click here to download ENSNBRG00000013701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013701	zgc:162730	100	74.194	ENSAPOG00000014920	zgc:162730	100	76.581	Acanthochromis_polyacanthus
ENSNBRG00000013701	zgc:162730	60	72.840	ENSACIG00000017366	zgc:162730	97	72.016	Amphilophus_citrinellus
ENSNBRG00000013701	zgc:162730	66	38.489	ENSACIG00000017364	zgc:114130	55	42.500	Amphilophus_citrinellus
ENSNBRG00000013701	zgc:162730	100	74.424	ENSAOCG00000002001	zgc:162730	100	77.518	Amphiprion_ocellaris
ENSNBRG00000013701	zgc:162730	89	80.759	ENSAPEG00000015490	zgc:162730	97	79.747	Amphiprion_percula
ENSNBRG00000013701	zgc:162730	100	70.439	ENSATEG00000008790	zgc:162730	100	72.028	Anabas_testudineus
ENSNBRG00000013701	zgc:162730	100	99.507	ENSACLG00000022112	zgc:162730	100	99.507	Astatotilapia_calliptera
ENSNBRG00000013701	zgc:162730	100	46.973	ENSAMXG00000035945	zgc:162730	99	45.783	Astyanax_mexicanus
ENSNBRG00000013701	zgc:162730	94	73.214	ENSCSEG00000018283	zgc:162730	95	68.724	Cynoglossus_semilaevis
ENSNBRG00000013701	zgc:162730	100	69.104	ENSCVAG00000018571	zgc:162730	100	69.811	Cyprinodon_variegatus
ENSNBRG00000013701	zgc:162730	100	43.276	ENSDARG00000103720	zgc:162730	75	53.546	Danio_rerio
ENSNBRG00000013701	zgc:162730	68	37.543	ENSELUG00000013151	zgc:114130	56	37.295	Esox_lucius
ENSNBRG00000013701	zgc:162730	100	51.074	ENSELUG00000013158	zgc:162730	100	50.358	Esox_lucius
ENSNBRG00000013701	zgc:162730	100	68.706	ENSFHEG00000013710	zgc:162730	100	69.176	Fundulus_heteroclitus
ENSNBRG00000013701	zgc:162730	67	37.943	ENSGMOG00000016803	sb:cb81	72	45.714	Gadus_morhua
ENSNBRG00000013701	zgc:162730	82	66.469	ENSGMOG00000017242	zgc:162730	100	62.090	Gadus_morhua
ENSNBRG00000013701	zgc:162730	100	71.868	ENSGAFG00000009953	zgc:162730	100	72.104	Gambusia_affinis
ENSNBRG00000013701	zgc:162730	82	72.861	ENSGACG00000008351	zgc:162730	100	68.732	Gasterosteus_aculeatus
ENSNBRG00000013701	zgc:162730	100	99.261	ENSHBUG00000015057	zgc:162730	100	99.261	Haplochromis_burtoni
ENSNBRG00000013701	zgc:162730	55	42.857	ENSHCOG00000015800	zgc:114130	71	39.490	Hippocampus_comes
ENSNBRG00000013701	zgc:162730	89	71.850	ENSHCOG00000015801	zgc:162730	100	66.513	Hippocampus_comes
ENSNBRG00000013701	zgc:162730	68	50.000	ENSHCOG00000012747	zfp36l1b	59	50.000	Hippocampus_comes
ENSNBRG00000013701	zgc:162730	100	46.635	ENSIPUG00000018248	zgc:162730	100	46.651	Ictalurus_punctatus
ENSNBRG00000013701	zgc:162730	100	70.960	ENSKMAG00000019277	zgc:162730	100	70.726	Kryptolebias_marmoratus
ENSNBRG00000013701	zgc:162730	100	72.430	ENSLBEG00000018380	zgc:162730	100	71.963	Labrus_bergylta
ENSNBRG00000013701	zgc:162730	100	37.529	ENSLACG00000015980	-	51	45.918	Latimeria_chalumnae
ENSNBRG00000013701	zgc:162730	99	37.352	ENSLACG00000015732	sb:cb81	69	40.000	Latimeria_chalumnae
ENSNBRG00000013701	zgc:162730	99	37.089	ENSLOCG00000014587	sb:cb81	80	39.650	Lepisosteus_oculatus
ENSNBRG00000013701	zgc:162730	100	47.170	ENSLOCG00000014597	zgc:162730	68	55.072	Lepisosteus_oculatus
ENSNBRG00000013701	zgc:162730	100	70.930	ENSMAMG00000007516	zgc:162730	99	73.488	Mastacembelus_armatus
ENSNBRG00000013701	zgc:162730	100	87.438	ENSMZEG00005014415	zgc:162730	100	87.438	Maylandia_zebra
ENSNBRG00000013701	zgc:162730	61	74.297	ENSMMOG00000011506	zgc:162730	99	72.691	Mola_mola
ENSNBRG00000013701	zgc:162730	100	69.606	ENSMALG00000002348	zgc:162730	100	71.230	Monopterus_albus
ENSNBRG00000013701	zgc:162730	86	79.310	ENSONIG00000005003	zgc:162730	100	78.736	Oreochromis_niloticus
ENSNBRG00000013701	zgc:162730	99	60.941	ENSORLG00000027149	zgc:162730	100	60.471	Oryzias_latipes
ENSNBRG00000013701	zgc:162730	99	61.176	ENSORLG00020020289	zgc:162730	100	60.706	Oryzias_latipes_hni
ENSNBRG00000013701	zgc:162730	99	61.502	ENSORLG00015001519	zgc:162730	100	60.798	Oryzias_latipes_hsok
ENSNBRG00000013701	zgc:162730	90	36.898	ENSOMEG00000020565	sb:cb81	65	40.984	Oryzias_melastigma
ENSNBRG00000013701	zgc:162730	99	64.775	ENSOMEG00000017752	zgc:162730	100	64.775	Oryzias_melastigma
ENSNBRG00000013701	zgc:162730	85	39.385	ENSPFOG00000013806	sb:cb81	50	45.588	Poecilia_formosa
ENSNBRG00000013701	zgc:162730	100	71.158	ENSPFOG00000003665	zgc:162730	99	73.775	Poecilia_formosa
ENSNBRG00000013701	zgc:162730	100	71.158	ENSPLAG00000000946	zgc:162730	100	71.395	Poecilia_latipinna
ENSNBRG00000013701	zgc:162730	85	39.385	ENSPLAG00000020158	sb:cb81	57	44.762	Poecilia_latipinna
ENSNBRG00000013701	zgc:162730	85	39.385	ENSPMEG00000022425	sb:cb81	66	32.794	Poecilia_mexicana
ENSNBRG00000013701	zgc:162730	100	71.631	ENSPMEG00000000341	zgc:162730	100	71.868	Poecilia_mexicana
ENSNBRG00000013701	zgc:162730	100	71.631	ENSPREG00000021263	zgc:162730	100	71.868	Poecilia_reticulata
ENSNBRG00000013701	zgc:162730	100	99.507	ENSPNYG00000015553	zgc:162730	100	99.507	Pundamilia_nyererei
ENSNBRG00000013701	zgc:162730	99	37.292	ENSPNAG00000030063	sb:cb81	71	42.414	Pygocentrus_nattereri
ENSNBRG00000013701	zgc:162730	100	45.763	ENSPNAG00000023018	zgc:162730	100	45.652	Pygocentrus_nattereri
ENSNBRG00000013701	zgc:162730	100	73.256	ENSSMAG00000018612	zgc:162730	100	72.558	Scophthalmus_maximus
ENSNBRG00000013701	zgc:162730	100	73.121	ENSSDUG00000002247	zgc:162730	100	77.083	Seriola_dumerili
ENSNBRG00000013701	zgc:162730	100	72.893	ENSSLDG00000008502	zgc:162730	100	76.620	Seriola_lalandi_dorsalis
ENSNBRG00000013701	zgc:162730	84	39.782	ENSSLDG00000018035	sb:cb81	50	44.934	Seriola_lalandi_dorsalis
ENSNBRG00000013701	zgc:162730	100	74.713	ENSSPAG00000006851	zgc:162730	100	76.815	Stegastes_partitus
ENSNBRG00000013701	zgc:162730	100	69.718	ENSTRUG00000021229	zgc:162730	100	69.249	Takifugu_rubripes
ENSNBRG00000013701	zgc:162730	95	64.304	ENSTNIG00000000183	zgc:162730	97	64.304	Tetraodon_nigroviridis
ENSNBRG00000013701	zgc:162730	100	70.784	ENSXCOG00000012791	zgc:162730	100	71.021	Xiphophorus_couchianus
ENSNBRG00000013701	zgc:162730	100	71.259	ENSXMAG00000018206	zgc:162730	100	71.496	Xiphophorus_maculatus