EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000013703 (Gene tree)
Gene ID: -
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: zgc:114130
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4507 bases
Position: chrJH422360.1:1167290-1171796
Accession: ZDB-GENE-050913-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017776	zf-CCCH	PF00642.24	3.3e-19	1	2
ENSNBRP00000017776	zf-CCCH	PF00642.24	3.3e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018254	-	978	-	ENSNBRP00000017776	325 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000013703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013703	zgc:114130	98	68.857	ENSAPOG00000014912	zgc:114130	81	67.989	Acanthochromis_polyacanthus
ENSNBRG00000013703	zgc:114130	99	74.000	ENSACIG00000017364	zgc:114130	97	76.571	Amphilophus_citrinellus
ENSNBRG00000013703	zgc:114130	98	68.857	ENSAOCG00000022227	zgc:114130	81	67.989	Amphiprion_ocellaris
ENSNBRG00000013703	zgc:114130	98	69.429	ENSAPEG00000015497	zgc:114130	81	68.555	Amphiprion_percula
ENSNBRG00000013703	zgc:114130	98	68.272	ENSATEG00000008781	zgc:114130	80	66.856	Anabas_testudineus
ENSNBRG00000013703	zgc:114130	98	90.882	ENSACLG00000022113	zgc:114130	80	90.882	Astatotilapia_calliptera
ENSNBRG00000013703	zgc:114130	98	45.299	ENSAMXG00000038581	zgc:114130	81	44.193	Astyanax_mexicanus
ENSNBRG00000013703	zgc:114130	91	32.743	ENSCSEG00000018283	zgc:162730	95	32.407	Cynoglossus_semilaevis
ENSNBRG00000013703	zgc:114130	98	60.000	ENSCSEG00000018290	zgc:114130	81	58.889	Cynoglossus_semilaevis
ENSNBRG00000013703	zgc:114130	94	60.234	ENSCVAG00000018574	zgc:114130	79	60.117	Cyprinodon_variegatus
ENSNBRG00000013703	zgc:114130	96	39.939	ENSDARG00000040503	sb:cb81	61	44.141	Danio_rerio
ENSNBRG00000013703	zgc:114130	98	48.529	ENSDARG00000040725	zgc:114130	80	50.000	Danio_rerio
ENSNBRG00000013703	zgc:114130	75	40.541	ENSELUG00000013158	zgc:162730	67	39.300	Esox_lucius
ENSNBRG00000013703	zgc:114130	95	48.955	ENSELUG00000013151	zgc:114130	77	51.360	Esox_lucius
ENSNBRG00000013703	zgc:114130	96	56.534	ENSFHEG00000000656	zgc:114130	81	57.102	Fundulus_heteroclitus
ENSNBRG00000013703	zgc:114130	94	59.502	ENSGMOG00000017223	zgc:114130	99	60.188	Gadus_morhua
ENSNBRG00000013703	zgc:114130	94	68.239	ENSGAFG00000009949	zgc:114130	91	67.925	Gambusia_affinis
ENSNBRG00000013703	zgc:114130	94	71.963	ENSGACG00000008344	zgc:114130	100	72.274	Gasterosteus_aculeatus
ENSNBRG00000013703	zgc:114130	96	39.244	ENSGACG00000013400	sb:cb81	63	44.393	Gasterosteus_aculeatus
ENSNBRG00000013703	zgc:114130	98	92.059	ENSHBUG00000015051	zgc:114130	80	92.059	Haplochromis_burtoni
ENSNBRG00000013703	zgc:114130	97	63.018	ENSHCOG00000015800	zgc:114130	78	61.834	Hippocampus_comes
ENSNBRG00000013703	zgc:114130	98	45.808	ENSIPUG00000018256	zgc:114130	68	45.345	Ictalurus_punctatus
ENSNBRG00000013703	zgc:114130	98	65.915	ENSKMAG00000019287	zgc:114130	81	66.102	Kryptolebias_marmoratus
ENSNBRG00000013703	zgc:114130	54	44.000	ENSKMAG00000009884	sb:cb81	55	41.631	Kryptolebias_marmoratus
ENSNBRG00000013703	zgc:114130	98	61.891	ENSLBEG00000018387	zgc:114130	79	62.751	Labrus_bergylta
ENSNBRG00000013703	zgc:114130	76	45.489	ENSLACG00000015732	sb:cb81	65	42.264	Latimeria_chalumnae
ENSNBRG00000013703	zgc:114130	98	64.451	ENSMAMG00000007511	zgc:114130	79	65.043	Mastacembelus_armatus
ENSNBRG00000013703	zgc:114130	53	42.424	ENSMZEG00005014415	zgc:162730	64	39.130	Maylandia_zebra
ENSNBRG00000013703	zgc:114130	98	91.176	ENSMZEG00005014410	zgc:114130	80	91.176	Maylandia_zebra
ENSNBRG00000013703	zgc:114130	97	70.091	ENSMMOG00000011504	zgc:114130	93	69.486	Mola_mola
ENSNBRG00000013703	zgc:114130	53	45.856	ENSONIG00000005003	zgc:162730	64	41.232	Oreochromis_niloticus
ENSNBRG00000013703	zgc:114130	94	93.478	ENSONIG00000005004	zgc:114130	100	93.478	Oreochromis_niloticus
ENSNBRG00000013703	zgc:114130	94	66.768	ENSPFOG00000003653	zgc:114130	94	67.378	Poecilia_formosa
ENSNBRG00000013703	zgc:114130	94	63.006	ENSPLAG00000000947	zgc:114130	80	63.873	Poecilia_latipinna
ENSNBRG00000013703	zgc:114130	94	62.931	ENSPMEG00000015335	zgc:114130	80	62.931	Poecilia_mexicana
ENSNBRG00000013703	zgc:114130	94	65.318	ENSPREG00000021254	zgc:114130	80	65.318	Poecilia_reticulata
ENSNBRG00000013703	zgc:114130	98	92.330	ENSPNYG00000015546	zgc:114130	80	92.330	Pundamilia_nyererei
ENSNBRG00000013703	zgc:114130	99	40.669	ENSPNAG00000023029	zgc:114130	81	44.475	Pygocentrus_nattereri
ENSNBRG00000013703	zgc:114130	95	36.508	ENSSFOG00015003179	sb:cb81	57	38.525	Scleropages_formosus
ENSNBRG00000013703	zgc:114130	95	63.127	ENSSMAG00000018621	zgc:114130	76	61.404	Scophthalmus_maximus
ENSNBRG00000013703	zgc:114130	97	68.103	ENSSDUG00000002237	zgc:114130	81	67.529	Seriola_dumerili
ENSNBRG00000013703	zgc:114130	96	68.208	ENSSLDG00000008496	zgc:114130	81	67.435	Seriola_lalandi_dorsalis
ENSNBRG00000013703	zgc:114130	98	70.317	ENSSPAG00000006856	zgc:114130	81	69.714	Stegastes_partitus
ENSNBRG00000013703	zgc:114130	77	41.667	ENSTGUG00000011494	ZFP36L1	51	55.224	Taeniopygia_guttata
ENSNBRG00000013703	zgc:114130	95	64.793	ENSTRUG00000022473	zgc:114130	78	64.793	Takifugu_rubripes
ENSNBRG00000013703	zgc:114130	94	59.740	ENSXCOG00000012792	zgc:114130	81	59.416	Xiphophorus_couchianus
ENSNBRG00000013703	zgc:114130	94	63.768	ENSXMAG00000026836	zgc:114130	80	64.928	Xiphophorus_maculatus