EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013796 (Gene tree)
Gene ID: 102787611
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain-containing protein 18-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1698 bases
Position: chrJH422278.1:8790464-8792161
Accession: 102787611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017880	zf-C2H2	PF00096.26	1.9e-12	1	3
ENSNBRP00000017880	zf-C2H2	PF00096.26	1.9e-12	2	3
ENSNBRP00000017880	zf-C2H2	PF00096.26	1.9e-12	3	3
ENSNBRP00000017880	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018366	-	1698	XM_006783648	ENSNBRP00000017880	565 (aa)	XP_006783711	UPI0003EC2718

Gene Model

Click here to download ENSNBRG00000013796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013796	zbtb18	95	41.026	ENSNBRG00000011170	zbtb16a	55	41.026
ENSNBRG00000013796	zbtb18	61	34.646	ENSNBRG00000014299	znf131	78	34.646
ENSNBRG00000013796	zbtb18	54	43.939	ENSNBRG00000019459	zbtb49	51	43.939
ENSNBRG00000013796	zbtb18	51	38.710	ENSNBRG00000021247	-	63	38.710
ENSNBRG00000013796	zbtb18	92	30.508	ENSNBRG00000018718	zbtb47b	59	35.433

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013796	zbtb18	100	97.007	ENSAPOG00000005168	zbtb18	98	97.007	Acanthochromis_polyacanthus
ENSNBRG00000013796	zbtb18	100	87.434	ENSACIG00000008655	zbtb18	98	87.434	Amphilophus_citrinellus
ENSNBRG00000013796	zbtb18	100	97.359	ENSAOCG00000014105	zbtb18	98	97.359	Amphiprion_ocellaris
ENSNBRG00000013796	zbtb18	100	96.848	ENSAPEG00000003817	zbtb18	77	96.848	Amphiprion_percula
ENSNBRG00000013796	zbtb18	100	96.106	ENSATEG00000010192	zbtb18	98	96.106	Anabas_testudineus
ENSNBRG00000013796	zbtb18	100	99.292	ENSACLG00000022978	zbtb18	97	99.292	Astatotilapia_calliptera
ENSNBRG00000013796	zbtb18	100	73.276	ENSAMXG00000042119	zbtb18	98	72.414	Astyanax_mexicanus
ENSNBRG00000013796	zbtb18	100	92.920	ENSCSEG00000003083	zbtb18	98	92.920	Cynoglossus_semilaevis
ENSNBRG00000013796	zbtb18	100	94.336	ENSCVAG00000016785	zbtb18	98	94.336	Cyprinodon_variegatus
ENSNBRG00000013796	zbtb18	100	71.902	ENSDARG00000028228	zbtb18	100	73.822	Danio_rerio
ENSNBRG00000013796	zbtb18	100	75.789	ENSELUG00000013471	zbtb18	98	75.088	Esox_lucius
ENSNBRG00000013796	zbtb18	100	94.346	ENSFHEG00000020005	zbtb18	98	94.346	Fundulus_heteroclitus
ENSNBRG00000013796	zbtb18	56	95.238	ENSGMOG00000018718	zbtb18	58	91.795	Gadus_morhua
ENSNBRG00000013796	zbtb18	100	91.873	ENSGAFG00000000619	zbtb18	98	91.873	Gambusia_affinis
ENSNBRG00000013796	zbtb18	100	91.681	ENSGACG00000010518	zbtb18	96	91.858	Gasterosteus_aculeatus
ENSNBRG00000013796	zbtb18	100	99.292	ENSHBUG00000013654	zbtb18	98	99.292	Haplochromis_burtoni
ENSNBRG00000013796	zbtb18	62	82.105	ENSHCOG00000002345	zbtb18	94	82.105	Hippocampus_comes
ENSNBRG00000013796	zbtb18	100	66.551	ENSIPUG00000008912	zbtb18	98	66.081	Ictalurus_punctatus
ENSNBRG00000013796	zbtb18	100	96.283	ENSKMAG00000002780	zbtb18	98	96.283	Kryptolebias_marmoratus
ENSNBRG00000013796	zbtb18	100	94.867	ENSLBEG00000014796	zbtb18	98	94.867	Labrus_bergylta
ENSNBRG00000013796	zbtb18	85	60.526	ENSMFAG00000033326	ZBTB18	98	59.026	Macaca_fascicularis
ENSNBRG00000013796	zbtb18	85	60.931	ENSMMUG00000015664	ZBTB18	100	59.432	Macaca_mulatta
ENSNBRG00000013796	zbtb18	100	96.991	ENSMAMG00000021720	zbtb18	98	96.991	Mastacembelus_armatus
ENSNBRG00000013796	zbtb18	100	99.292	ENSMZEG00005027394	zbtb18	98	99.292	Maylandia_zebra
ENSNBRG00000013796	zbtb18	96	50.829	ENSMGAG00000015389	-	100	50.647	Meleagris_gallopavo
ENSNBRG00000013796	zbtb18	100	88.142	ENSMMOG00000007888	zbtb18	99	88.142	Mola_mola
ENSNBRG00000013796	zbtb18	100	95.398	ENSMALG00000000725	zbtb18	98	95.398	Monopterus_albus
ENSNBRG00000013796	zbtb18	100	99.292	ENSONIG00000000862	zbtb18	98	99.292	Oreochromis_niloticus
ENSNBRG00000013796	zbtb18	100	94.513	ENSORLG00000027425	zbtb18	97	94.513	Oryzias_latipes
ENSNBRG00000013796	zbtb18	100	94.690	ENSORLG00020011988	zbtb18	97	94.690	Oryzias_latipes_hni
ENSNBRG00000013796	zbtb18	100	94.513	ENSORLG00015017457	zbtb18	97	94.513	Oryzias_latipes_hsok
ENSNBRG00000013796	zbtb18	100	94.690	ENSOMEG00000011249	zbtb18	97	94.690	Oryzias_melastigma
ENSNBRG00000013796	zbtb18	100	70.506	ENSPKIG00000021964	zbtb18	95	70.934	Paramormyrops_kingsleyae
ENSNBRG00000013796	zbtb18	100	55.478	ENSPKIG00000008787	-	100	55.478	Paramormyrops_kingsleyae
ENSNBRG00000013796	zbtb18	100	83.363	ENSPMGG00000008020	zbtb18	100	83.363	Periophthalmus_magnuspinnatus
ENSNBRG00000013796	zbtb18	100	91.696	ENSPFOG00000022080	zbtb18	100	91.696	Poecilia_formosa
ENSNBRG00000013796	zbtb18	100	86.042	ENSPLAG00000011299	-	100	86.042	Poecilia_latipinna
ENSNBRG00000013796	zbtb18	100	86.042	ENSPLAG00000020960	zbtb18	100	86.042	Poecilia_latipinna
ENSNBRG00000013796	zbtb18	100	92.580	ENSPMEG00000007554	zbtb18	100	92.580	Poecilia_mexicana
ENSNBRG00000013796	zbtb18	100	92.756	ENSPREG00000008576	zbtb18	98	92.756	Poecilia_reticulata
ENSNBRG00000013796	zbtb18	100	99.292	ENSPNYG00000001530	zbtb18	98	99.292	Pundamilia_nyererei
ENSNBRG00000013796	zbtb18	86	70.916	ENSPNAG00000014066	zbtb18	86	69.721	Pygocentrus_nattereri
ENSNBRG00000013796	zbtb18	100	94.513	ENSSMAG00000018041	zbtb18	100	94.336	Scophthalmus_maximus
ENSNBRG00000013796	zbtb18	100	97.699	ENSSDUG00000018660	zbtb18	100	97.699	Seriola_dumerili
ENSNBRG00000013796	zbtb18	100	97.699	ENSSLDG00000022573	zbtb18	100	97.699	Seriola_lalandi_dorsalis
ENSNBRG00000013796	zbtb18	96	48.352	ENSSPUG00000010554	-	100	50.549	Sphenodon_punctatus
ENSNBRG00000013796	zbtb18	100	97.345	ENSSPAG00000002691	zbtb18	98	97.345	Stegastes_partitus
ENSNBRG00000013796	zbtb18	100	94.690	ENSTRUG00000020604	zbtb18	100	94.690	Takifugu_rubripes
ENSNBRG00000013796	zbtb18	100	86.396	ENSTNIG00000000430	zbtb18	98	86.396	Tetraodon_nigroviridis
ENSNBRG00000013796	zbtb18	100	86.749	ENSXCOG00000013308	zbtb18	100	87.633	Xiphophorus_couchianus
ENSNBRG00000013796	zbtb18	100	83.216	ENSXMAG00000018241	zbtb18	99	83.216	Xiphophorus_maculatus