EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013865 (Gene tree)
Gene ID: 102792253
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3B subunit 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4580 bases
Position: chrJH422285.1:6568102-6572681
Accession: 102792253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017976	RRM_1	PF00076.22	2.9e-39	1	2
ENSNBRP00000017976	RRM_1	PF00076.22	2.9e-39	2	2
ENSNBRP00000017982	RRM_1	PF00076.22	7.3e-28	1	2
ENSNBRP00000017982	RRM_1	PF00076.22	7.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018471	-	2017	-	ENSNBRP00000017982	414 (aa)	-	-
ENSNBRT00000018465	-	1381	XM_006787901	ENSNBRP00000017976	401 (aa)	XP_006787964	UPI0003EBBF95

Gene Model

Click here to download ENSNBRG00000013865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013865	sf3b4	52	38.372	ENSNBRG00000011319	tia1l	78	36.782

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013865	sf3b4	76	81.818	ENSG00000143368	SF3B4	99	96.296	Homo_sapiens
ENSNBRG00000013865	sf3b4	72	95.517	ENSAPOG00000017647	sf3b4	73	95.517	Acanthochromis_polyacanthus
ENSNBRG00000013865	sf3b4	76	81.818	ENSAMEG00000010073	SF3B4	57	96.250	Ailuropoda_melanoleuca
ENSNBRG00000013865	sf3b4	69	86.331	ENSACIG00000018455	sf3b4	70	98.312	Amphilophus_citrinellus
ENSNBRG00000013865	sf3b4	72	94.828	ENSAOCG00000019801	sf3b4	73	94.828	Amphiprion_ocellaris
ENSNBRG00000013865	sf3b4	72	94.828	ENSAPEG00000010365	sf3b4	73	94.828	Amphiprion_percula
ENSNBRG00000013865	sf3b4	60	98.333	ENSATEG00000012844	sf3b4	67	96.269	Anabas_testudineus
ENSNBRG00000013865	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	57	96.624	Anolis_carolinensis
ENSNBRG00000013865	sf3b4	76	81.818	ENSANAG00000031025	SF3B4	57	96.250	Aotus_nancymaae
ENSNBRG00000013865	sf3b4	100	99.252	ENSACLG00000014260	sf3b4	100	99.252	Astatotilapia_calliptera
ENSNBRG00000013865	sf3b4	60	98.333	ENSAMXG00000008282	sf3b4	60	98.333	Astyanax_mexicanus
ENSNBRG00000013865	sf3b4	53	94.393	ENSBTAG00000012793	-	53	94.393	Bos_taurus
ENSNBRG00000013865	sf3b4	76	81.818	ENSBTAG00000012495	SF3B4	57	96.250	Bos_taurus
ENSNBRG00000013865	sf3b4	82	58.663	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSNBRG00000013865	sf3b4	60	96.250	ENSCAFG00000011617	SF3B4	57	96.250	Canis_familiaris
ENSNBRG00000013865	sf3b4	60	96.250	ENSCAFG00020019775	SF3B4	57	96.250	Canis_lupus_dingo
ENSNBRG00000013865	sf3b4	76	81.818	ENSCHIG00000025663	-	57	96.250	Capra_hircus
ENSNBRG00000013865	sf3b4	73	59.868	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSNBRG00000013865	sf3b4	76	81.818	ENSTSYG00000009295	SF3B4	57	96.250	Carlito_syrichta
ENSNBRG00000013865	sf3b4	58	94.086	ENSCAPG00000006451	SF3B4	51	95.028	Cavia_aperea
ENSNBRG00000013865	sf3b4	60	96.250	ENSCPOG00000008267	SF3B4	57	96.250	Cavia_porcellus
ENSNBRG00000013865	sf3b4	75	70.794	ENSCCAG00000019823	-	50	87.619	Cebus_capucinus
ENSNBRG00000013865	sf3b4	60	95.417	ENSCCAG00000021751	-	54	95.417	Cebus_capucinus
ENSNBRG00000013865	sf3b4	76	81.818	ENSCATG00000033114	SF3B4	57	96.250	Cercocebus_atys
ENSNBRG00000013865	sf3b4	60	96.250	ENSCLAG00000015851	SF3B4	57	96.250	Chinchilla_lanigera
ENSNBRG00000013865	sf3b4	76	81.818	ENSCSAG00000018129	SF3B4	57	96.250	Chlorocebus_sabaeus
ENSNBRG00000013865	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	57	96.203	Chrysemys_picta_bellii
ENSNBRG00000013865	sf3b4	56	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSNBRG00000013865	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSNBRG00000013865	sf3b4	76	81.818	ENSCANG00000035579	SF3B4	57	96.250	Colobus_angolensis_palliatus
ENSNBRG00000013865	sf3b4	60	96.250	ENSCGRG00001003590	Sf3b4	57	96.250	Cricetulus_griseus_chok1gshd
ENSNBRG00000013865	sf3b4	60	96.250	ENSCGRG00000016914	Sf3b4	57	96.250	Cricetulus_griseus_crigri
ENSNBRG00000013865	sf3b4	67	94.757	ENSCVAG00000005536	sf3b4	69	92.910	Cyprinodon_variegatus
ENSNBRG00000013865	sf3b4	60	98.333	ENSDARG00000018574	sf3b4	67	95.149	Danio_rerio
ENSNBRG00000013865	sf3b4	74	77.492	ENSDNOG00000048908	-	54	92.920	Dasypus_novemcinctus
ENSNBRG00000013865	sf3b4	97	65.750	ENSDNOG00000037231	-	56	81.696	Dasypus_novemcinctus
ENSNBRG00000013865	sf3b4	76	81.818	ENSDORG00000016366	Sf3b4	57	96.250	Dipodomys_ordii
ENSNBRG00000013865	sf3b4	57	88.158	ENSETEG00000008963	SF3B4	56	86.498	Echinops_telfairi
ENSNBRG00000013865	sf3b4	76	81.818	ENSEASG00005001477	SF3B4	57	96.250	Equus_asinus_asinus
ENSNBRG00000013865	sf3b4	76	81.818	ENSECAG00000024737	SF3B4	57	96.250	Equus_caballus
ENSNBRG00000013865	sf3b4	87	86.857	ENSELUG00000012876	sf3b4	67	95.522	Esox_lucius
ENSNBRG00000013865	sf3b4	76	81.818	ENSFCAG00000010106	SF3B4	57	96.250	Felis_catus
ENSNBRG00000013865	sf3b4	60	96.250	ENSFDAG00000009286	SF3B4	57	96.250	Fukomys_damarensis
ENSNBRG00000013865	sf3b4	57	98.261	ENSGMOG00000002519	sf3b4	70	96.624	Gadus_morhua
ENSNBRG00000013865	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	57	96.203	Gallus_gallus
ENSNBRG00000013865	sf3b4	70	92.527	ENSGAFG00000010181	sf3b4	71	92.527	Gambusia_affinis
ENSNBRG00000013865	sf3b4	56	100.000	ENSGACG00000003819	sf3b4	60	97.468	Gasterosteus_aculeatus
ENSNBRG00000013865	sf3b4	53	100.000	ENSGAGG00000025055	SF3B4	50	96.203	Gopherus_agassizii
ENSNBRG00000013865	sf3b4	76	69.649	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSNBRG00000013865	sf3b4	76	81.818	ENSGGOG00000004761	SF3B4	57	96.250	Gorilla_gorilla
ENSNBRG00000013865	sf3b4	100	99.252	ENSHBUG00000002028	sf3b4	100	99.252	Haplochromis_burtoni
ENSNBRG00000013865	sf3b4	60	96.250	ENSHGLG00000012360	SF3B4	57	96.250	Heterocephalus_glaber_female
ENSNBRG00000013865	sf3b4	60	96.250	ENSHGLG00100008533	SF3B4	57	96.250	Heterocephalus_glaber_male
ENSNBRG00000013865	sf3b4	57	97.357	ENSHCOG00000003014	sf3b4	59	95.359	Hippocampus_comes
ENSNBRG00000013865	sf3b4	69	94.565	ENSIPUG00000012242	Sf3b4	67	95.896	Ictalurus_punctatus
ENSNBRG00000013865	sf3b4	95	58.718	ENSSTOG00000029627	-	52	73.043	Ictidomys_tridecemlineatus
ENSNBRG00000013865	sf3b4	76	81.818	ENSSTOG00000000684	-	57	96.250	Ictidomys_tridecemlineatus
ENSNBRG00000013865	sf3b4	75	59.551	ENSJJAG00000022500	Sf3b4	59	70.748	Jaculus_jaculus
ENSNBRG00000013865	sf3b4	94	89.683	ENSKMAG00000008154	sf3b4	84	91.843	Kryptolebias_marmoratus
ENSNBRG00000013865	sf3b4	58	98.707	ENSLBEG00000026818	sf3b4	59	97.890	Labrus_bergylta
ENSNBRG00000013865	sf3b4	60	94.583	ENSLACG00000004436	SF3B4	66	94.583	Latimeria_chalumnae
ENSNBRG00000013865	sf3b4	57	99.563	ENSLOCG00000009048	sf3b4	56	97.046	Lepisosteus_oculatus
ENSNBRG00000013865	sf3b4	76	80.312	ENSLAFG00000008531	SF3B4	56	96.250	Loxodonta_africana
ENSNBRG00000013865	sf3b4	89	63.158	ENSMFAG00000039067	-	60	78.125	Macaca_fascicularis
ENSNBRG00000013865	sf3b4	76	81.818	ENSMFAG00000042395	SF3B4	57	96.250	Macaca_fascicularis
ENSNBRG00000013865	sf3b4	76	81.818	ENSMMUG00000007256	SF3B4	57	96.250	Macaca_mulatta
ENSNBRG00000013865	sf3b4	89	62.604	ENSMNEG00000031526	-	60	77.679	Macaca_nemestrina
ENSNBRG00000013865	sf3b4	76	81.818	ENSMNEG00000031839	SF3B4	57	96.250	Macaca_nemestrina
ENSNBRG00000013865	sf3b4	76	81.818	ENSMLEG00000038667	SF3B4	57	96.250	Mandrillus_leucophaeus
ENSNBRG00000013865	sf3b4	60	97.917	ENSMAMG00000014692	sf3b4	60	97.917	Mastacembelus_armatus
ENSNBRG00000013865	sf3b4	100	99.252	ENSMZEG00005026741	sf3b4	100	99.252	Maylandia_zebra
ENSNBRG00000013865	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	57	96.203	Meleagris_gallopavo
ENSNBRG00000013865	sf3b4	60	96.250	ENSMAUG00000015266	Sf3b4	57	96.250	Mesocricetus_auratus
ENSNBRG00000013865	sf3b4	76	81.818	ENSMICG00000044961	SF3B4	57	96.250	Microcebus_murinus
ENSNBRG00000013865	sf3b4	92	72.351	ENSMOCG00000014155	-	57	93.939	Microtus_ochrogaster
ENSNBRG00000013865	sf3b4	76	79.937	ENSMOCG00000013658	-	57	96.250	Microtus_ochrogaster
ENSNBRG00000013865	sf3b4	76	81.818	ENSMODG00000018767	SF3B4	57	96.250	Monodelphis_domestica
ENSNBRG00000013865	sf3b4	66	95.076	ENSMALG00000006174	sf3b4	66	95.076	Monopterus_albus
ENSNBRG00000013865	sf3b4	60	96.250	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.250	Mus_caroli
ENSNBRG00000013865	sf3b4	60	96.250	ENSMUSG00000068856	Sf3b4	57	96.250	Mus_musculus
ENSNBRG00000013865	sf3b4	60	96.250	MGP_PahariEiJ_G0026809	Sf3b4	57	96.250	Mus_pahari
ENSNBRG00000013865	sf3b4	60	96.250	MGP_SPRETEiJ_G0026309	Sf3b4	57	96.250	Mus_spretus
ENSNBRG00000013865	sf3b4	76	81.818	ENSMPUG00000005563	SF3B4	57	96.250	Mustela_putorius_furo
ENSNBRG00000013865	sf3b4	76	81.818	ENSMLUG00000010789	SF3B4	57	96.250	Myotis_lucifugus
ENSNBRG00000013865	sf3b4	76	81.505	ENSNGAG00000016337	Sf3b4	57	96.250	Nannospalax_galili
ENSNBRG00000013865	sf3b4	90	68.533	ENSNLEG00000000537	-	60	86.920	Nomascus_leucogenys
ENSNBRG00000013865	sf3b4	57	93.860	ENSOPRG00000010808	SF3B4	56	91.983	Ochotona_princeps
ENSNBRG00000013865	sf3b4	91	58.090	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSNBRG00000013865	sf3b4	76	68.454	ENSODEG00000003597	-	59	80.083	Octodon_degus
ENSNBRG00000013865	sf3b4	100	98.753	ENSONIG00000002730	sf3b4	100	98.753	Oreochromis_niloticus
ENSNBRG00000013865	sf3b4	65	72.015	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSNBRG00000013865	sf3b4	76	81.818	ENSOCUG00000004614	SF3B4	57	96.250	Oryctolagus_cuniculus
ENSNBRG00000013865	sf3b4	74	91.362	ENSORLG00000003062	sf3b4	61	98.734	Oryzias_latipes
ENSNBRG00000013865	sf3b4	74	91.362	ENSORLG00020000687	sf3b4	59	98.734	Oryzias_latipes_hni
ENSNBRG00000013865	sf3b4	74	91.362	ENSORLG00015010989	sf3b4	59	98.734	Oryzias_latipes_hsok
ENSNBRG00000013865	sf3b4	58	98.707	ENSOMEG00000013694	sf3b4	60	98.312	Oryzias_melastigma
ENSNBRG00000013865	sf3b4	76	81.818	ENSOGAG00000006265	SF3B4	57	96.250	Otolemur_garnettii
ENSNBRG00000013865	sf3b4	71	72.297	ENSOARG00000007368	-	57	79.828	Ovis_aries
ENSNBRG00000013865	sf3b4	76	81.818	ENSOARG00000020718	-	57	96.250	Ovis_aries
ENSNBRG00000013865	sf3b4	76	76.038	ENSPPAG00000030024	-	59	86.250	Pan_paniscus
ENSNBRG00000013865	sf3b4	76	81.818	ENSPPAG00000040904	SF3B4	57	96.250	Pan_paniscus
ENSNBRG00000013865	sf3b4	76	81.818	ENSPPRG00000007384	SF3B4	57	96.250	Panthera_pardus
ENSNBRG00000013865	sf3b4	76	81.818	ENSPTIG00000014530	SF3B4	57	96.250	Panthera_tigris_altaica
ENSNBRG00000013865	sf3b4	76	81.818	ENSPTRG00000001243	SF3B4	57	96.250	Pan_troglodytes
ENSNBRG00000013865	sf3b4	76	76.623	ENSPTRG00000049727	-	60	86.667	Pan_troglodytes
ENSNBRG00000013865	sf3b4	76	81.818	ENSPANG00000005126	SF3B4	57	96.250	Papio_anubis
ENSNBRG00000013865	sf3b4	61	97.531	ENSPKIG00000020669	sf3b4	71	94.776	Paramormyrops_kingsleyae
ENSNBRG00000013865	sf3b4	66	78.409	ENSPSIG00000009565	SF3B4	69	96.825	Pelodiscus_sinensis
ENSNBRG00000013865	sf3b4	60	96.250	ENSPEMG00000017568	Sf3b4	57	96.250	Peromyscus_maniculatus_bairdii
ENSNBRG00000013865	sf3b4	53	95.305	ENSPMAG00000007842	-	55	90.717	Petromyzon_marinus
ENSNBRG00000013865	sf3b4	76	81.818	ENSPCIG00000008765	SF3B4	57	96.250	Phascolarctos_cinereus
ENSNBRG00000013865	sf3b4	70	93.238	ENSPFOG00000005754	sf3b4	71	93.238	Poecilia_formosa
ENSNBRG00000013865	sf3b4	70	93.238	ENSPLAG00000001401	sf3b4	78	93.238	Poecilia_latipinna
ENSNBRG00000013865	sf3b4	70	91.815	ENSPREG00000011076	sf3b4	70	93.238	Poecilia_reticulata
ENSNBRG00000013865	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSNBRG00000013865	sf3b4	76	81.818	ENSPCOG00000015399	SF3B4	57	96.250	Propithecus_coquereli
ENSNBRG00000013865	sf3b4	76	81.818	ENSPVAG00000014171	SF3B4	57	96.250	Pteropus_vampyrus
ENSNBRG00000013865	sf3b4	100	99.252	ENSPNYG00000012700	sf3b4	100	99.252	Pundamilia_nyererei
ENSNBRG00000013865	sf3b4	60	97.500	ENSPNAG00000000686	sf3b4	68	94.776	Pygocentrus_nattereri
ENSNBRG00000013865	sf3b4	60	96.250	ENSRNOG00000021181	Sf3b4	57	96.250	Rattus_norvegicus
ENSNBRG00000013865	sf3b4	76	81.818	ENSRBIG00000043392	SF3B4	57	96.250	Rhinopithecus_bieti
ENSNBRG00000013865	sf3b4	92	58.901	ENSRROG00000028213	-	58	73.362	Rhinopithecus_roxellana
ENSNBRG00000013865	sf3b4	76	81.818	ENSRROG00000029366	SF3B4	57	96.250	Rhinopithecus_roxellana
ENSNBRG00000013865	sf3b4	76	81.505	ENSSBOG00000012310	-	57	95.833	Saimiri_boliviensis_boliviensis
ENSNBRG00000013865	sf3b4	97	57.037	ENSSBOG00000025174	-	51	74.684	Saimiri_boliviensis_boliviensis
ENSNBRG00000013865	sf3b4	76	78.370	ENSSHAG00000004043	SF3B4	56	91.667	Sarcophilus_harrisii
ENSNBRG00000013865	sf3b4	61	97.531	ENSSFOG00015008864	sf3b4	66	94.776	Scleropages_formosus
ENSNBRG00000013865	sf3b4	99	89.776	ENSSMAG00000006837	sf3b4	67	96.617	Scophthalmus_maximus
ENSNBRG00000013865	sf3b4	66	96.992	ENSSDUG00000012064	sf3b4	67	96.642	Seriola_dumerili
ENSNBRG00000013865	sf3b4	66	96.617	ENSSLDG00000014226	sf3b4	66	96.617	Seriola_lalandi_dorsalis
ENSNBRG00000013865	sf3b4	60	97.917	ENSSPAG00000019219	sf3b4	67	95.522	Stegastes_partitus
ENSNBRG00000013865	sf3b4	76	80.564	ENSSSCG00000006665	-	57	96.250	Sus_scrofa
ENSNBRG00000013865	sf3b4	79	55.312	ENSSSCG00000039440	-	58	62.869	Sus_scrofa
ENSNBRG00000013865	sf3b4	60	95.041	ENSTGUG00000004470	SF3B4	93	96.610	Taeniopygia_guttata
ENSNBRG00000013865	sf3b4	79	89.905	ENSTRUG00000004516	sf3b4	60	96.624	Takifugu_rubripes
ENSNBRG00000013865	sf3b4	57	98.696	ENSTNIG00000009156	sf3b4	61	97.468	Tetraodon_nigroviridis
ENSNBRG00000013865	sf3b4	76	81.818	ENSTTRG00000005217	SF3B4	57	96.250	Tursiops_truncatus
ENSNBRG00000013865	sf3b4	76	81.818	ENSUAMG00000022468	SF3B4	57	96.250	Ursus_americanus
ENSNBRG00000013865	sf3b4	93	72.152	ENSUMAG00000003802	SF3B4	57	96.250	Ursus_maritimus
ENSNBRG00000013865	sf3b4	73	81.107	ENSVPAG00000008152	SF3B4	55	96.053	Vicugna_pacos
ENSNBRG00000013865	sf3b4	60	96.250	ENSVVUG00000007732	-	61	96.250	Vulpes_vulpes
ENSNBRG00000013865	sf3b4	76	80.263	ENSXETG00000011038	sf3b4	59	94.144	Xenopus_tropicalis
ENSNBRG00000013865	sf3b4	66	95.113	ENSXCOG00000019895	sf3b4	68	95.113	Xiphophorus_couchianus
ENSNBRG00000013865	sf3b4	70	92.883	ENSXMAG00000003772	sf3b4	74	92.734	Xiphophorus_maculatus