EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014004 (Gene tree)
Gene ID: 102783501
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3089 bases
Position: chrJH422292.1:4727849-4730937
Accession: 102783501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018157	MMR_HSR1	PF01926.23	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018647	-	597	XM_006791098	ENSNBRP00000018157	198 (aa)	XP_006791161	UPI00022B1F5F

Gene Model

Click here to download ENSNBRG00000014004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014004	-	88	31.429	ENSNBRG00000016455	-	91	31.429
ENSNBRG00000014004	-	92	30.645	ENSNBRG00000017591	ARL6	85	30.645
ENSNBRG00000014004	-	100	84.848	ENSNBRG00000008013	sar1b	100	84.848
ENSNBRG00000014004	-	56	34.234	ENSNBRG00000005929	-	60	34.234
ENSNBRG00000014004	-	100	78.788	ENSNBRG00000018772	sar1ab	100	78.788
ENSNBRG00000014004	-	82	33.951	ENSNBRG00000006393	arl2	90	33.951
ENSNBRG00000014004	-	86	33.333	ENSNBRG00000018555	-	82	33.333
ENSNBRG00000014004	-	94	31.551	ENSNBRG00000023803	arf2b	96	31.551
ENSNBRG00000014004	-	64	37.795	ENSNBRG00000004078	arl13b	51	37.795
ENSNBRG00000014004	-	94	30.108	ENSNBRG00000016833	-	96	30.108
ENSNBRG00000014004	-	71	33.571	ENSNBRG00000020245	arl5c	85	33.571
ENSNBRG00000014004	-	72	35.135	ENSNBRG00000015182	-	73	35.135
ENSNBRG00000014004	-	71	35.616	ENSNBRG00000020745	arl4cb	71	35.616
ENSNBRG00000014004	-	92	30.769	ENSNBRG00000017218	arf3b	80	30.769
ENSNBRG00000014004	-	92	32.240	ENSNBRG00000019783	arl1	93	32.240
ENSNBRG00000014004	-	91	32.065	ENSNBRG00000011196	-	96	32.065
ENSNBRG00000014004	-	91	32.065	ENSNBRG00000004364	-	89	32.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014004	-	100	84.343	ENSAPOG00000007186	sar1b	100	84.343	Acanthochromis_polyacanthus
ENSNBRG00000014004	-	100	98.485	ENSAPOG00000017891	-	100	98.485	Acanthochromis_polyacanthus
ENSNBRG00000014004	-	100	85.354	ENSACIG00000013634	sar1b	100	85.354	Amphilophus_citrinellus
ENSNBRG00000014004	-	100	98.990	ENSACIG00000024513	-	100	98.990	Amphilophus_citrinellus
ENSNBRG00000014004	-	100	98.485	ENSAOCG00000002627	-	100	98.485	Amphiprion_ocellaris
ENSNBRG00000014004	-	100	83.838	ENSAOCG00000005888	sar1b	100	83.838	Amphiprion_ocellaris
ENSNBRG00000014004	-	100	98.485	ENSAPEG00000019680	-	100	98.485	Amphiprion_percula
ENSNBRG00000014004	-	100	83.838	ENSAPEG00000022771	sar1b	100	83.838	Amphiprion_percula
ENSNBRG00000014004	-	100	82.828	ENSATEG00000012904	sar1b	100	82.828	Anabas_testudineus
ENSNBRG00000014004	-	100	95.455	ENSATEG00000023368	-	100	95.455	Anabas_testudineus
ENSNBRG00000014004	-	100	83.838	ENSACAG00000001470	-	100	83.838	Anolis_carolinensis
ENSNBRG00000014004	-	100	84.848	ENSACLG00000014649	sar1b	100	84.848	Astatotilapia_calliptera
ENSNBRG00000014004	-	100	99.495	ENSACLG00000005011	-	100	99.495	Astatotilapia_calliptera
ENSNBRG00000014004	-	100	89.899	ENSAMXG00000034192	-	91	89.899	Astyanax_mexicanus
ENSNBRG00000014004	-	59	90.598	ENSAMXG00000018108	sar1b	84	90.598	Astyanax_mexicanus
ENSNBRG00000014004	-	100	79.798	ENSCSEG00000015238	sar1b	97	79.798	Cynoglossus_semilaevis
ENSNBRG00000014004	-	100	92.929	ENSCSEG00000016976	-	100	92.929	Cynoglossus_semilaevis
ENSNBRG00000014004	-	100	86.364	ENSCVAG00000022959	sar1b	100	86.364	Cyprinodon_variegatus
ENSNBRG00000014004	-	100	85.859	ENSDARG00000103403	sar1b	100	85.859	Danio_rerio
ENSNBRG00000014004	-	99	68.878	FBgn0038947	Sar1	99	68.878	Drosophila_melanogaster
ENSNBRG00000014004	-	97	80.729	ENSEBUG00000011723	sar1b	97	80.729	Eptatretus_burgeri
ENSNBRG00000014004	-	100	86.869	ENSELUG00000020912	sar1b	100	86.869	Esox_lucius
ENSNBRG00000014004	-	100	85.354	ENSFHEG00000019865	sar1b	100	85.354	Fundulus_heteroclitus
ENSNBRG00000014004	-	100	85.354	ENSGMOG00000008023	sar1b	100	85.354	Gadus_morhua
ENSNBRG00000014004	-	100	83.838	ENSGAFG00000007081	sar1b	100	83.838	Gambusia_affinis
ENSNBRG00000014004	-	100	82.323	ENSGACG00000001474	sar1b	100	82.323	Gasterosteus_aculeatus
ENSNBRG00000014004	-	100	84.848	ENSHBUG00000000915	sar1b	100	84.848	Haplochromis_burtoni
ENSNBRG00000014004	-	100	99.495	ENSHBUG00000018397	-	100	99.495	Haplochromis_burtoni
ENSNBRG00000014004	-	100	83.838	ENSHCOG00000010953	sar1b	100	83.838	Hippocampus_comes
ENSNBRG00000014004	-	100	88.889	ENSIPUG00000010046	sar1b	100	88.889	Ictalurus_punctatus
ENSNBRG00000014004	-	100	84.343	ENSIPUG00000020925	sar1b	100	84.343	Ictalurus_punctatus
ENSNBRG00000014004	-	100	84.343	ENSKMAG00000019693	sar1b	100	84.343	Kryptolebias_marmoratus
ENSNBRG00000014004	-	100	91.414	ENSKMAG00000014875	-	100	91.414	Kryptolebias_marmoratus
ENSNBRG00000014004	-	100	97.980	ENSLBEG00000016945	-	100	97.980	Labrus_bergylta
ENSNBRG00000014004	-	100	81.313	ENSLBEG00000027550	sar1b	100	81.313	Labrus_bergylta
ENSNBRG00000014004	-	100	67.839	ENSLACG00000017029	-	100	67.839	Latimeria_chalumnae
ENSNBRG00000014004	-	100	81.313	ENSLACG00000010795	sar1b	100	81.313	Latimeria_chalumnae
ENSNBRG00000014004	-	100	87.879	ENSLOCG00000005214	-	100	87.879	Lepisosteus_oculatus
ENSNBRG00000014004	-	100	85.859	ENSLOCG00000010197	sar1b	100	85.859	Lepisosteus_oculatus
ENSNBRG00000014004	-	100	83.838	ENSMAMG00000021732	sar1b	100	83.838	Mastacembelus_armatus
ENSNBRG00000014004	-	100	84.848	ENSMZEG00005008942	sar1b	100	84.848	Maylandia_zebra
ENSNBRG00000014004	-	100	99.495	ENSMZEG00005001012	-	100	99.495	Maylandia_zebra
ENSNBRG00000014004	-	90	86.034	ENSMGAG00000005387	-	91	86.034	Meleagris_gallopavo
ENSNBRG00000014004	-	100	96.465	ENSMMOG00000013803	-	100	96.465	Mola_mola
ENSNBRG00000014004	-	100	83.333	ENSMALG00000016635	sar1b	97	82.418	Monopterus_albus
ENSNBRG00000014004	-	100	84.848	ENSONIG00000017278	sar1b	100	84.848	Oreochromis_niloticus
ENSNBRG00000014004	-	100	85.354	ENSORLG00000000932	sar1b	100	85.354	Oryzias_latipes
ENSNBRG00000014004	-	100	85.354	ENSORLG00020021985	sar1b	100	85.354	Oryzias_latipes_hni
ENSNBRG00000014004	-	100	85.354	ENSORLG00015007044	sar1b	100	85.354	Oryzias_latipes_hsok
ENSNBRG00000014004	-	100	83.838	ENSOMEG00000001052	sar1b	100	83.838	Oryzias_melastigma
ENSNBRG00000014004	-	100	83.838	ENSPKIG00000010688	sar1b	100	83.838	Paramormyrops_kingsleyae
ENSNBRG00000014004	-	100	86.364	ENSPKIG00000017353	-	100	86.364	Paramormyrops_kingsleyae
ENSNBRG00000014004	-	59	88.793	ENSPMGG00000001234	sar1b	91	88.793	Periophthalmus_magnuspinnatus
ENSNBRG00000014004	-	100	80.597	ENSPMAG00000003593	sar1b	100	80.597	Petromyzon_marinus
ENSNBRG00000014004	-	100	83.838	ENSPFOG00000005666	sar1b	100	83.838	Poecilia_formosa
ENSNBRG00000014004	-	59	92.308	ENSPLAG00000001016	-	75	92.308	Poecilia_latipinna
ENSNBRG00000014004	-	100	84.343	ENSPLAG00000012223	sar1b	100	84.343	Poecilia_latipinna
ENSNBRG00000014004	-	100	83.838	ENSPMEG00000016831	sar1b	100	83.838	Poecilia_mexicana
ENSNBRG00000014004	-	100	83.838	ENSPREG00000005312	sar1b	90	83.838	Poecilia_reticulata
ENSNBRG00000014004	-	60	91.525	ENSPREG00000002020	-	87	91.525	Poecilia_reticulata
ENSNBRG00000014004	-	100	98.990	ENSPNYG00000021357	-	100	98.990	Pundamilia_nyererei
ENSNBRG00000014004	-	100	84.848	ENSPNYG00000012440	sar1b	100	84.848	Pundamilia_nyererei
ENSNBRG00000014004	-	100	86.364	ENSPNAG00000014683	sar1b	100	86.364	Pygocentrus_nattereri
ENSNBRG00000014004	-	100	90.909	ENSPNAG00000001123	-	100	90.909	Pygocentrus_nattereri
ENSNBRG00000014004	-	100	86.869	ENSSFOG00015020051	sar1b	100	86.869	Scleropages_formosus
ENSNBRG00000014004	-	100	86.364	ENSSFOG00015018128	-	100	86.364	Scleropages_formosus
ENSNBRG00000014004	-	100	94.949	ENSSMAG00000002165	-	100	94.949	Scophthalmus_maximus
ENSNBRG00000014004	-	100	81.313	ENSSMAG00000007106	sar1b	80	81.313	Scophthalmus_maximus
ENSNBRG00000014004	-	100	84.848	ENSSDUG00000020926	sar1b	100	84.848	Seriola_dumerili
ENSNBRG00000014004	-	100	98.485	ENSSDUG00000019629	-	100	98.485	Seriola_dumerili
ENSNBRG00000014004	-	100	84.848	ENSSLDG00000017052	sar1b	94	91.667	Seriola_lalandi_dorsalis
ENSNBRG00000014004	-	100	98.485	ENSSLDG00000024197	-	100	98.485	Seriola_lalandi_dorsalis
ENSNBRG00000014004	-	100	83.838	ENSSPUG00000010247	-	100	83.838	Sphenodon_punctatus
ENSNBRG00000014004	-	100	98.485	ENSSPAG00000015626	-	100	98.485	Stegastes_partitus
ENSNBRG00000014004	-	100	84.848	ENSSPAG00000017634	sar1b	100	84.848	Stegastes_partitus
ENSNBRG00000014004	-	100	81.313	ENSTRUG00000023908	sar1b	100	81.313	Takifugu_rubripes
ENSNBRG00000014004	-	100	82.323	ENSTNIG00000016097	sar1b	100	82.323	Tetraodon_nigroviridis
ENSNBRG00000014004	-	90	83.708	ENSXCOG00000004160	sar1b	87	83.708	Xiphophorus_couchianus
ENSNBRG00000014004	-	59	90.598	ENSXCOG00000006154	-	79	90.598	Xiphophorus_couchianus
ENSNBRG00000014004	-	100	83.838	ENSXMAG00000008294	sar1b	100	83.838	Xiphophorus_maculatus