EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000014257 (Gene tree)
Gene ID: 102796217
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: telomere-associated protein RIF1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23232 bases
Position: chrJH422420.1:13339-36570
Accession: 102796217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018668	Rif1_N	PF12231.8	5.4e-80	1	1
ENSNBRP00000018716	Rif1_N	PF12231.8	6.9e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019214	-	6756	XM_006805777	ENSNBRP00000018716	2251 (aa)	XP_006805840	-
ENSNBRT00000019166	-	6744	-	ENSNBRP00000018668	2247 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000014257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014257	rif1	71	48.722	ENSG00000080345	RIF1	97	53.083	Homo_sapiens
ENSNBRG00000014257	rif1	99	72.778	ENSAPOG00000011073	rif1	96	66.625	Acanthochromis_polyacanthus
ENSNBRG00000014257	rif1	69	49.961	ENSAMEG00000008461	RIF1	63	50.525	Ailuropoda_melanoleuca
ENSNBRG00000014257	rif1	100	78.019	ENSACIG00000017765	rif1	100	78.063	Amphilophus_citrinellus
ENSNBRG00000014257	rif1	99	73.198	ENSAOCG00000017231	rif1	96	68.922	Amphiprion_ocellaris
ENSNBRG00000014257	rif1	96	76.790	ENSAPEG00000013228	rif1	96	76.790	Amphiprion_percula
ENSNBRG00000014257	rif1	99	72.319	ENSATEG00000022887	rif1	99	72.319	Anabas_testudineus
ENSNBRG00000014257	rif1	62	51.530	ENSAPLG00000007092	RIF1	67	51.488	Anas_platyrhynchos
ENSNBRG00000014257	rif1	72	48.006	ENSACAG00000003714	RIF1	71	48.160	Anolis_carolinensis
ENSNBRG00000014257	rif1	71	48.915	ENSANAG00000024840	RIF1	76	47.059	Aotus_nancymaae
ENSNBRG00000014257	rif1	87	66.967	ENSAMXG00000010910	rif1	75	66.967	Astyanax_mexicanus
ENSNBRG00000014257	rif1	62	49.823	ENSBTAG00000021020	RIF1	74	45.511	Bos_taurus
ENSNBRG00000014257	rif1	71	49.239	ENSCJAG00000003138	RIF1	76	46.296	Callithrix_jacchus
ENSNBRG00000014257	rif1	72	50.039	ENSCAFG00000005670	RIF1	63	50.520	Canis_familiaris
ENSNBRG00000014257	rif1	73	50.039	ENSCAFG00020016401	RIF1	69	50.520	Canis_lupus_dingo
ENSNBRG00000014257	rif1	70	49.462	ENSCHIG00000020327	RIF1	76	45.820	Capra_hircus
ENSNBRG00000014257	rif1	78	47.368	ENSTSYG00000008861	RIF1	78	47.368	Carlito_syrichta
ENSNBRG00000014257	rif1	60	41.818	ENSCAPG00000008957	RIF1	80	41.358	Cavia_aperea
ENSNBRG00000014257	rif1	69	48.060	ENSCPOG00000037898	RIF1	63	48.710	Cavia_porcellus
ENSNBRG00000014257	rif1	69	49.091	ENSCCAG00000024760	RIF1	62	49.034	Cebus_capucinus
ENSNBRG00000014257	rif1	69	50.079	ENSCATG00000033353	RIF1	62	50.768	Cercocebus_atys
ENSNBRG00000014257	rif1	69	48.452	ENSCLAG00000001517	RIF1	74	45.062	Chinchilla_lanigera
ENSNBRG00000014257	rif1	69	50.157	ENSCSAG00000016089	RIF1	62	50.931	Chlorocebus_sabaeus
ENSNBRG00000014257	rif1	65	49.778	ENSCHOG00000007187	RIF1	59	50.222	Choloepus_hoffmanni
ENSNBRG00000014257	rif1	73	49.797	ENSCPBG00000025885	RIF1	73	49.959	Chrysemys_picta_bellii
ENSNBRG00000014257	rif1	64	56.637	ENSCANG00000028962	RIF1	61	56.889	Colobus_angolensis_palliatus
ENSNBRG00000014257	rif1	73	47.683	ENSCGRG00001024589	Rif1	70	47.696	Cricetulus_griseus_chok1gshd
ENSNBRG00000014257	rif1	71	49.192	ENSCGRG00000010713	Rif1	69	49.172	Cricetulus_griseus_crigri
ENSNBRG00000014257	rif1	95	69.231	ENSCSEG00000003945	rif1	86	68.994	Cynoglossus_semilaevis
ENSNBRG00000014257	rif1	99	56.253	ENSCVAG00000022479	rif1	99	55.266	Cyprinodon_variegatus
ENSNBRG00000014257	rif1	93	63.450	ENSDARG00000062650	rif1	75	63.450	Danio_rerio
ENSNBRG00000014257	rif1	89	46.918	ENSDNOG00000011194	RIF1	80	45.461	Dasypus_novemcinctus
ENSNBRG00000014257	rif1	69	45.593	ENSETEG00000012421	RIF1	63	46.556	Echinops_telfairi
ENSNBRG00000014257	rif1	61	68.092	ENSEASG00005023434	RIF1	59	68.092	Equus_asinus_asinus
ENSNBRG00000014257	rif1	67	57.122	ENSECAG00000012679	RIF1	78	44.838	Equus_caballus
ENSNBRG00000014257	rif1	73	65.642	ENSELUG00000006826	rif1	63	65.642	Esox_lucius
ENSNBRG00000014257	rif1	69	49.653	ENSFCAG00000029742	RIF1	62	50.718	Felis_catus
ENSNBRG00000014257	rif1	66	49.375	ENSFALG00000013874	RIF1	69	50.711	Ficedula_albicollis
ENSNBRG00000014257	rif1	70	49.084	ENSFDAG00000006538	RIF1	62	50.804	Fukomys_damarensis
ENSNBRG00000014257	rif1	100	59.958	ENSFHEG00000013721	rif1	99	65.605	Fundulus_heteroclitus
ENSNBRG00000014257	rif1	71	63.636	ENSGMOG00000003517	rif1	99	63.636	Gadus_morhua
ENSNBRG00000014257	rif1	57	50.180	ENSGALG00000012484	RIF1	69	51.097	Gallus_gallus
ENSNBRG00000014257	rif1	96	75.770	ENSGAFG00000017196	rif1	95	75.770	Gambusia_affinis
ENSNBRG00000014257	rif1	93	78.539	ENSGACG00000008579	rif1	87	68.494	Gasterosteus_aculeatus
ENSNBRG00000014257	rif1	73	51.011	ENSGAGG00000012595	RIF1	70	51.090	Gopherus_agassizii
ENSNBRG00000014257	rif1	58	57.368	ENSGGOG00000040178	RIF1	56	57.368	Gorilla_gorilla
ENSNBRG00000014257	rif1	100	88.378	ENSHBUG00000007125	rif1	98	89.800	Haplochromis_burtoni
ENSNBRG00000014257	rif1	76	49.656	ENSHGLG00100009807	RIF1	70	51.571	Heterocephalus_glaber_male
ENSNBRG00000014257	rif1	96	68.094	ENSHCOG00000015943	rif1	75	68.237	Hippocampus_comes
ENSNBRG00000014257	rif1	90	63.848	ENSIPUG00000021703	rif1	72	63.848	Ictalurus_punctatus
ENSNBRG00000014257	rif1	76	48.787	ENSSTOG00000020712	RIF1	77	44.444	Ictidomys_tridecemlineatus
ENSNBRG00000014257	rif1	75	45.706	ENSJJAG00000023000	Rif1	70	46.001	Jaculus_jaculus
ENSNBRG00000014257	rif1	100	61.132	ENSKMAG00000002852	rif1	99	61.340	Kryptolebias_marmoratus
ENSNBRG00000014257	rif1	99	73.149	ENSLBEG00000023196	rif1	87	72.354	Labrus_bergylta
ENSNBRG00000014257	rif1	57	52.786	ENSLACG00000005425	RIF1	66	55.064	Latimeria_chalumnae
ENSNBRG00000014257	rif1	80	59.280	ENSLOCG00000002657	rif1	79	60.111	Lepisosteus_oculatus
ENSNBRG00000014257	rif1	69	50.549	ENSLAFG00000009796	RIF1	63	51.255	Loxodonta_africana
ENSNBRG00000014257	rif1	73	49.882	ENSMFAG00000032233	RIF1	68	50.723	Macaca_fascicularis
ENSNBRG00000014257	rif1	73	49.882	ENSMMUG00000008611	RIF1	68	50.723	Macaca_mulatta
ENSNBRG00000014257	rif1	73	50.118	ENSMNEG00000031616	RIF1	68	50.687	Macaca_nemestrina
ENSNBRG00000014257	rif1	69	50.079	ENSMLEG00000042945	RIF1	62	50.768	Mandrillus_leucophaeus
ENSNBRG00000014257	rif1	86	64.550	ENSMAMG00000001745	rif1	86	64.744	Mastacembelus_armatus
ENSNBRG00000014257	rif1	99	93.651	ENSMZEG00005020920	rif1	100	92.345	Maylandia_zebra
ENSNBRG00000014257	rif1	63	51.118	ENSMGAG00000012732	RIF1	72	51.254	Meleagris_gallopavo
ENSNBRG00000014257	rif1	69	63.912	ENSMAUG00000013158	Rif1	66	63.912	Mesocricetus_auratus
ENSNBRG00000014257	rif1	83	49.017	ENSMICG00000046127	RIF1	73	51.163	Microcebus_murinus
ENSNBRG00000014257	rif1	72	46.863	ENSMOCG00000009381	Rif1	66	48.578	Microtus_ochrogaster
ENSNBRG00000014257	rif1	99	57.858	ENSMMOG00000006519	rif1	97	69.435	Mola_mola
ENSNBRG00000014257	rif1	67	51.165	ENSMODG00000003703	RIF1	63	51.510	Monodelphis_domestica
ENSNBRG00000014257	rif1	97	65.100	ENSMALG00000016759	rif1	99	64.907	Monopterus_albus
ENSNBRG00000014257	rif1	66	50.813	MGP_CAROLIEiJ_G0023555	Rif1	63	51.138	Mus_caroli
ENSNBRG00000014257	rif1	69	48.897	ENSMUSG00000036202	Rif1	62	50.685	Mus_musculus
ENSNBRG00000014257	rif1	66	48.127	MGP_PahariEiJ_G0025006	Rif1	62	48.455	Mus_pahari
ENSNBRG00000014257	rif1	69	49.538	MGP_SPRETEiJ_G0024476	Rif1	63	51.336	Mus_spretus
ENSNBRG00000014257	rif1	76	48.182	ENSMPUG00000000371	RIF1	75	46.914	Mustela_putorius_furo
ENSNBRG00000014257	rif1	58	47.001	ENSMLUG00000003376	RIF1	59	47.523	Myotis_lucifugus
ENSNBRG00000014257	rif1	64	48.224	ENSNGAG00000009268	Rif1	66	49.883	Nannospalax_galili
ENSNBRG00000014257	rif1	72	48.000	ENSNLEG00000010955	RIF1	62	49.880	Nomascus_leucogenys
ENSNBRG00000014257	rif1	68	47.767	ENSODEG00000003950	RIF1	63	48.560	Octodon_degus
ENSNBRG00000014257	rif1	99	88.558	ENSONIG00000013657	rif1	100	88.027	Oreochromis_niloticus
ENSNBRG00000014257	rif1	58	54.606	ENSOANG00000006078	-	55	54.606	Ornithorhynchus_anatinus
ENSNBRG00000014257	rif1	72	48.698	ENSOCUG00000017435	RIF1	67	49.156	Oryctolagus_cuniculus
ENSNBRG00000014257	rif1	99	56.709	ENSORLG00020001302	rif1	99	55.275	Oryzias_latipes_hni
ENSNBRG00000014257	rif1	99	56.473	ENSORLG00015000009	rif1	99	54.107	Oryzias_latipes_hsok
ENSNBRG00000014257	rif1	99	53.769	ENSOMEG00000021513	rif1	99	53.624	Oryzias_melastigma
ENSNBRG00000014257	rif1	70	50.356	ENSOGAG00000006141	RIF1	64	50.930	Otolemur_garnettii
ENSNBRG00000014257	rif1	69	50.274	ENSOARG00000008930	RIF1	62	50.971	Ovis_aries
ENSNBRG00000014257	rif1	71	48.571	ENSPPAG00000023754	RIF1	62	50.526	Pan_paniscus
ENSNBRG00000014257	rif1	69	49.653	ENSPPRG00000003618	RIF1	64	49.079	Panthera_pardus
ENSNBRG00000014257	rif1	69	49.653	ENSPTIG00000020652	RIF1	64	49.079	Panthera_tigris_altaica
ENSNBRG00000014257	rif1	69	50.040	ENSPTRG00000012534	RIF1	62	50.607	Pan_troglodytes
ENSNBRG00000014257	rif1	73	50.157	ENSPANG00000008525	RIF1	68	50.849	Papio_anubis
ENSNBRG00000014257	rif1	81	55.037	ENSPKIG00000004267	rif1	84	55.037	Paramormyrops_kingsleyae
ENSNBRG00000014257	rif1	81	62.855	ENSPMGG00000016141	rif1	96	60.452	Periophthalmus_magnuspinnatus
ENSNBRG00000014257	rif1	71	49.729	ENSPEMG00000000446	Rif1	65	51.322	Peromyscus_maniculatus_bairdii
ENSNBRG00000014257	rif1	71	49.158	ENSPCIG00000009185	RIF1	64	50.894	Phascolarctos_cinereus
ENSNBRG00000014257	rif1	92	60.620	ENSPFOG00000000554	-	85	71.348	Poecilia_formosa
ENSNBRG00000014257	rif1	100	61.837	ENSPFOG00000017804	rif1	86	72.390	Poecilia_formosa
ENSNBRG00000014257	rif1	100	62.783	ENSPLAG00000017945	rif1	99	61.522	Poecilia_latipinna
ENSNBRG00000014257	rif1	89	57.130	ENSPMEG00000006897	-	99	55.881	Poecilia_mexicana
ENSNBRG00000014257	rif1	97	65.860	ENSPREG00000018052	rif1	99	59.264	Poecilia_reticulata
ENSNBRG00000014257	rif1	71	48.788	ENSPPYG00000012846	RIF1	62	50.688	Pongo_abelii
ENSNBRG00000014257	rif1	74	49.922	ENSPCOG00000027888	RIF1	71	50.925	Propithecus_coquereli
ENSNBRG00000014257	rif1	59	59.146	ENSPVAG00000014276	RIF1	56	60.246	Pteropus_vampyrus
ENSNBRG00000014257	rif1	99	90.474	ENSPNYG00000012940	rif1	99	89.991	Pundamilia_nyererei
ENSNBRG00000014257	rif1	93	62.264	ENSPNAG00000016685	rif1	76	62.264	Pygocentrus_nattereri
ENSNBRG00000014257	rif1	69	49.072	ENSRNOG00000054901	Rif1	65	49.154	Rattus_norvegicus
ENSNBRG00000014257	rif1	68	49.761	ENSRBIG00000003704	RIF1	68	50.040	Rhinopithecus_bieti
ENSNBRG00000014257	rif1	73	50.157	ENSRROG00000028206	RIF1	68	50.804	Rhinopithecus_roxellana
ENSNBRG00000014257	rif1	65	54.023	ENSSBOG00000029530	RIF1	61	54.023	Saimiri_boliviensis_boliviensis
ENSNBRG00000014257	rif1	69	49.604	ENSSHAG00000018552	RIF1	64	50.286	Sarcophilus_harrisii
ENSNBRG00000014257	rif1	83	63.557	ENSSFOG00015021539	rif1	84	62.216	Scleropages_formosus
ENSNBRG00000014257	rif1	99	71.758	ENSSMAG00000011704	rif1	95	71.758	Scophthalmus_maximus
ENSNBRG00000014257	rif1	99	70.194	ENSSDUG00000015632	rif1	99	69.763	Seriola_dumerili
ENSNBRG00000014257	rif1	99	72.946	ENSSLDG00000019531	rif1	99	73.009	Seriola_lalandi_dorsalis
ENSNBRG00000014257	rif1	63	52.762	ENSSPUG00000003062	RIF1	73	50.256	Sphenodon_punctatus
ENSNBRG00000014257	rif1	63	78.455	ENSSPAG00000018359	rif1	97	78.455	Stegastes_partitus
ENSNBRG00000014257	rif1	80	49.503	ENSSSCG00000016395	RIF1	86	43.048	Sus_scrofa
ENSNBRG00000014257	rif1	99	59.514	ENSTRUG00000015808	rif1	88	71.348	Takifugu_rubripes
ENSNBRG00000014257	rif1	99	57.299	ENSTNIG00000011538	rif1	79	69.193	Tetraodon_nigroviridis
ENSNBRG00000014257	rif1	58	53.521	ENSTBEG00000016082	RIF1	53	54.303	Tupaia_belangeri
ENSNBRG00000014257	rif1	71	49.017	ENSTTRG00000011190	RIF1	62	50.728	Tursiops_truncatus
ENSNBRG00000014257	rif1	70	47.587	ENSUAMG00000026385	RIF1	70	48.214	Ursus_americanus
ENSNBRG00000014257	rif1	80	49.253	ENSUMAG00000000337	RIF1	73	49.799	Ursus_maritimus
ENSNBRG00000014257	rif1	68	49.365	ENSVPAG00000002162	RIF1	62	49.480	Vicugna_pacos
ENSNBRG00000014257	rif1	70	49.688	ENSVVUG00000011293	RIF1	64	50.160	Vulpes_vulpes
ENSNBRG00000014257	rif1	58	46.137	ENSXETG00000004530	rif1	72	47.849	Xenopus_tropicalis
ENSNBRG00000014257	rif1	99	55.639	ENSXMAG00000000506	rif1	99	55.305	Xiphophorus_maculatus