EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014262 (Gene tree)
Gene ID: 102787351
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: DNA-directed RNA polymerase III subunit RPC1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23213 bases
Position: chrJH422292.1:4912533-4935745
Accession: 102787351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018581	RNA_pol_Rpb1_5	PF04998.17	1.4e-88	1	1
ENSNBRP00000018581	RNA_pol_Rpb1_4	PF05000.17	4.4e-32	1	1
ENSNBRP00000018581	RNA_pol_Rpb1_2	PF00623.20	9.9e-73	1	1
ENSNBRP00000018581	RNA_pol_Rpb1_3	PF04983.18	9.2e-41	1	1
ENSNBRP00000018581	RNA_pol_Rpb1_1	PF04997.12	8.5e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019072	-	4083	XM_006791113	ENSNBRP00000018581	1360 (aa)	XP_006791176	-

Gene Model

Click here to download ENSNBRG00000014262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014262	polr3a	64	44.248	ENSNBRG00000000519	polr1a	54	44.248
ENSNBRG00000014262	polr3a	93	38.037	ENSNBRG00000002005	polr2a	68	38.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014262	polr3a	100	88.273	ENSG00000148606	POLR3A	98	91.772	Homo_sapiens
ENSNBRG00000014262	polr3a	63	93.264	ENSAPOG00000022727	polr3a	99	93.264	Acanthochromis_polyacanthus
ENSNBRG00000014262	polr3a	100	88.083	ENSAMEG00000017801	POLR3A	100	88.083	Ailuropoda_melanoleuca
ENSNBRG00000014262	polr3a	93	95.308	ENSACIG00000024504	polr3a	97	95.308	Amphilophus_citrinellus
ENSNBRG00000014262	polr3a	100	91.223	ENSAOCG00000003949	-	100	91.223	Amphiprion_ocellaris
ENSNBRG00000014262	polr3a	100	94.532	ENSAOCG00000002071	polr3a	100	94.532	Amphiprion_ocellaris
ENSNBRG00000014262	polr3a	100	94.532	ENSAPEG00000013351	polr3a	100	94.532	Amphiprion_percula
ENSNBRG00000014262	polr3a	100	94.460	ENSAPEG00000001966	-	100	94.460	Amphiprion_percula
ENSNBRG00000014262	polr3a	100	94.676	ENSATEG00000023277	polr3a	100	94.676	Anabas_testudineus
ENSNBRG00000014262	polr3a	99	88.727	ENSAPLG00000015878	POLR3A	99	88.727	Anas_platyrhynchos
ENSNBRG00000014262	polr3a	93	87.166	ENSACAG00000007985	POLR3A	99	87.166	Anolis_carolinensis
ENSNBRG00000014262	polr3a	100	85.776	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSNBRG00000014262	polr3a	100	96.978	ENSACLG00000005914	polr3a	100	96.978	Astatotilapia_calliptera
ENSNBRG00000014262	polr3a	100	87.770	ENSAMXG00000018852	polr3a	100	87.770	Astyanax_mexicanus
ENSNBRG00000014262	polr3a	100	88.345	ENSBTAG00000013259	POLR3A	100	88.345	Bos_taurus
ENSNBRG00000014262	polr3a	98	56.407	WBGene00004411	rpc-1	99	56.407	Caenorhabditis_elegans
ENSNBRG00000014262	polr3a	100	88.129	ENSCJAG00000001015	POLR3A	100	88.129	Callithrix_jacchus
ENSNBRG00000014262	polr3a	100	88.201	ENSCAFG00000015546	POLR3A	100	88.201	Canis_familiaris
ENSNBRG00000014262	polr3a	100	88.201	ENSCAFG00020014711	POLR3A	100	88.201	Canis_lupus_dingo
ENSNBRG00000014262	polr3a	100	87.986	ENSCHIG00000000352	POLR3A	100	87.986	Capra_hircus
ENSNBRG00000014262	polr3a	100	87.770	ENSTSYG00000006671	POLR3A	100	87.770	Carlito_syrichta
ENSNBRG00000014262	polr3a	99	88.000	ENSCAPG00000016031	POLR3A	100	88.000	Cavia_aperea
ENSNBRG00000014262	polr3a	100	88.058	ENSCPOG00000022387	POLR3A	100	88.058	Cavia_porcellus
ENSNBRG00000014262	polr3a	100	90.015	ENSCCAG00000032995	POLR3A	100	90.015	Cebus_capucinus
ENSNBRG00000014262	polr3a	100	88.273	ENSCATG00000035842	POLR3A	98	91.772	Cercocebus_atys
ENSNBRG00000014262	polr3a	100	88.058	ENSCLAG00000009629	POLR3A	100	88.058	Chinchilla_lanigera
ENSNBRG00000014262	polr3a	100	88.273	ENSCSAG00000009292	POLR3A	100	88.273	Chlorocebus_sabaeus
ENSNBRG00000014262	polr3a	80	79.221	ENSCHOG00000008368	POLR3A	95	79.221	Choloepus_hoffmanni
ENSNBRG00000014262	polr3a	99	88.625	ENSCPBG00000002079	POLR3A	99	88.625	Chrysemys_picta_bellii
ENSNBRG00000014262	polr3a	99	68.903	ENSCSAVG00000009925	-	99	68.903	Ciona_savignyi
ENSNBRG00000014262	polr3a	86	83.434	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSNBRG00000014262	polr3a	80	90.108	ENSCGRG00001015599	-	93	90.108	Cricetulus_griseus_chok1gshd
ENSNBRG00000014262	polr3a	88	86.608	ENSCGRG00000001019	Polr3a	100	86.608	Cricetulus_griseus_crigri
ENSNBRG00000014262	polr3a	100	93.597	ENSCSEG00000016653	polr3a	100	93.597	Cynoglossus_semilaevis
ENSNBRG00000014262	polr3a	100	93.525	ENSCVAG00000023049	polr3a	100	93.525	Cyprinodon_variegatus
ENSNBRG00000014262	polr3a	99	90.490	ENSDARG00000102569	polr3a	99	90.490	Danio_rerio
ENSNBRG00000014262	polr3a	100	87.482	ENSDNOG00000010194	POLR3A	100	87.482	Dasypus_novemcinctus
ENSNBRG00000014262	polr3a	100	88.201	ENSDORG00000000184	Polr3a	100	88.201	Dipodomys_ordii
ENSNBRG00000014262	polr3a	99	56.534	FBgn0030687	CG17209	99	56.534	Drosophila_melanogaster
ENSNBRG00000014262	polr3a	87	89.474	ENSETEG00000007477	POLR3A	89	89.474	Echinops_telfairi
ENSNBRG00000014262	polr3a	60	75.850	ENSEBUG00000013761	polr3a	98	75.850	Eptatretus_burgeri
ENSNBRG00000014262	polr3a	100	88.201	ENSEASG00005023053	POLR3A	100	88.201	Equus_asinus_asinus
ENSNBRG00000014262	polr3a	96	88.227	ENSECAG00000019416	POLR3A	100	87.850	Equus_caballus
ENSNBRG00000014262	polr3a	96	83.818	ENSEEUG00000001774	POLR3A	100	83.818	Erinaceus_europaeus
ENSNBRG00000014262	polr3a	100	89.663	ENSELUG00000014016	polr3a	100	89.663	Esox_lucius
ENSNBRG00000014262	polr3a	100	88.417	ENSFCAG00000000843	POLR3A	100	88.417	Felis_catus
ENSNBRG00000014262	polr3a	100	88.426	ENSFALG00000006913	POLR3A	100	88.426	Ficedula_albicollis
ENSNBRG00000014262	polr3a	100	88.345	ENSFDAG00000007813	POLR3A	100	88.345	Fukomys_damarensis
ENSNBRG00000014262	polr3a	94	92.058	ENSFHEG00000011922	polr3a	99	92.058	Fundulus_heteroclitus
ENSNBRG00000014262	polr3a	100	87.686	ENSGMOG00000000291	polr3a	99	87.686	Gadus_morhua
ENSNBRG00000014262	polr3a	100	88.777	ENSGALG00000004947	POLR3A	100	88.777	Gallus_gallus
ENSNBRG00000014262	polr3a	100	93.237	ENSGAFG00000005112	polr3a	100	93.237	Gambusia_affinis
ENSNBRG00000014262	polr3a	99	94.984	ENSGACG00000002304	polr3a	100	93.525	Gasterosteus_aculeatus
ENSNBRG00000014262	polr3a	95	88.569	ENSGAGG00000010386	POLR3A	98	88.569	Gopherus_agassizii
ENSNBRG00000014262	polr3a	99	87.211	ENSGGOG00000027729	POLR3A	98	91.772	Gorilla_gorilla
ENSNBRG00000014262	polr3a	100	96.978	ENSHBUG00000018098	polr3a	100	96.978	Haplochromis_burtoni
ENSNBRG00000014262	polr3a	100	88.345	ENSHGLG00000017899	POLR3A	100	88.345	Heterocephalus_glaber_female
ENSNBRG00000014262	polr3a	100	88.345	ENSHGLG00100008483	POLR3A	100	88.345	Heterocephalus_glaber_male
ENSNBRG00000014262	polr3a	100	93.022	ENSHCOG00000001075	polr3a	100	93.022	Hippocampus_comes
ENSNBRG00000014262	polr3a	100	88.345	ENSSTOG00000012983	POLR3A	100	88.345	Ictidomys_tridecemlineatus
ENSNBRG00000014262	polr3a	100	93.669	ENSKMAG00000015290	polr3a	100	93.669	Kryptolebias_marmoratus
ENSNBRG00000014262	polr3a	99	92.225	ENSLBEG00000017214	polr3a	99	92.225	Labrus_bergylta
ENSNBRG00000014262	polr3a	96	86.617	ENSLACG00000018557	POLR3A	99	86.617	Latimeria_chalumnae
ENSNBRG00000014262	polr3a	100	90.596	ENSLOCG00000004942	polr3a	100	90.596	Lepisosteus_oculatus
ENSNBRG00000014262	polr3a	100	86.844	ENSLAFG00000016719	POLR3A	100	86.844	Loxodonta_africana
ENSNBRG00000014262	polr3a	100	88.201	ENSMFAG00000032218	POLR3A	100	88.201	Macaca_fascicularis
ENSNBRG00000014262	polr3a	100	88.201	ENSMMUG00000005514	POLR3A	98	91.772	Macaca_mulatta
ENSNBRG00000014262	polr3a	99	81.916	ENSMNEG00000035163	POLR3A	99	87.456	Macaca_nemestrina
ENSNBRG00000014262	polr3a	100	84.676	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSNBRG00000014262	polr3a	100	94.388	ENSMAMG00000017497	polr3a	100	94.388	Mastacembelus_armatus
ENSNBRG00000014262	polr3a	100	96.978	ENSMZEG00005000576	polr3a	100	96.978	Maylandia_zebra
ENSNBRG00000014262	polr3a	100	71.236	ENSMGAG00000005713	-	100	71.236	Meleagris_gallopavo
ENSNBRG00000014262	polr3a	100	85.899	ENSMAUG00000016247	Polr3a	100	85.899	Mesocricetus_auratus
ENSNBRG00000014262	polr3a	100	88.273	ENSMICG00000005937	POLR3A	100	89.053	Microcebus_murinus
ENSNBRG00000014262	polr3a	100	87.986	ENSMOCG00000012185	Polr3a	100	87.986	Microtus_ochrogaster
ENSNBRG00000014262	polr3a	100	93.597	ENSMMOG00000013822	polr3a	100	93.597	Mola_mola
ENSNBRG00000014262	polr3a	100	88.201	ENSMODG00000001036	POLR3A	100	88.201	Monodelphis_domestica
ENSNBRG00000014262	polr3a	100	94.317	ENSMALG00000001249	polr3a	100	94.317	Monopterus_albus
ENSNBRG00000014262	polr3a	100	88.058	MGP_CAROLIEiJ_G0019016	Polr3a	100	88.058	Mus_caroli
ENSNBRG00000014262	polr3a	100	88.058	ENSMUSG00000025280	Polr3a	100	88.058	Mus_musculus
ENSNBRG00000014262	polr3a	100	88.058	MGP_PahariEiJ_G0030029	Polr3a	100	88.058	Mus_pahari
ENSNBRG00000014262	polr3a	100	85.468	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSNBRG00000014262	polr3a	100	87.518	ENSMPUG00000003790	POLR3A	100	87.518	Mustela_putorius_furo
ENSNBRG00000014262	polr3a	100	87.194	ENSMLUG00000011522	POLR3A	100	87.194	Myotis_lucifugus
ENSNBRG00000014262	polr3a	100	86.763	ENSNGAG00000015863	Polr3a	100	86.763	Nannospalax_galili
ENSNBRG00000014262	polr3a	88	83.653	ENSNLEG00000010501	POLR3A	92	83.653	Nomascus_leucogenys
ENSNBRG00000014262	polr3a	94	88.732	ENSMEUG00000012446	POLR3A	93	88.732	Notamacropus_eugenii
ENSNBRG00000014262	polr3a	100	83.597	ENSOPRG00000001880	-	100	83.597	Ochotona_princeps
ENSNBRG00000014262	polr3a	100	87.482	ENSODEG00000015146	POLR3A	100	87.482	Octodon_degus
ENSNBRG00000014262	polr3a	100	96.978	ENSONIG00000016129	polr3a	100	96.978	Oreochromis_niloticus
ENSNBRG00000014262	polr3a	98	87.655	ENSOANG00000007013	POLR3A	100	87.655	Ornithorhynchus_anatinus
ENSNBRG00000014262	polr3a	100	87.770	ENSOCUG00000012450	POLR3A	100	87.770	Oryctolagus_cuniculus
ENSNBRG00000014262	polr3a	100	93.813	ENSORLG00000008958	polr3a	100	93.813	Oryzias_latipes
ENSNBRG00000014262	polr3a	100	91.511	ENSORLG00020007525	polr3a	98	94.113	Oryzias_latipes_hni
ENSNBRG00000014262	polr3a	100	93.813	ENSORLG00015006633	polr3a	100	93.813	Oryzias_latipes_hsok
ENSNBRG00000014262	polr3a	100	93.022	ENSOMEG00000012865	polr3a	100	93.022	Oryzias_melastigma
ENSNBRG00000014262	polr3a	100	88.058	ENSOGAG00000010995	POLR3A	100	88.058	Otolemur_garnettii
ENSNBRG00000014262	polr3a	100	88.003	ENSOARG00000009656	POLR3A	100	88.003	Ovis_aries
ENSNBRG00000014262	polr3a	100	88.417	ENSPPRG00000002128	POLR3A	100	88.417	Panthera_pardus
ENSNBRG00000014262	polr3a	100	88.417	ENSPTIG00000020916	POLR3A	100	88.417	Panthera_tigris_altaica
ENSNBRG00000014262	polr3a	100	88.345	ENSPTRG00000002664	POLR3A	98	91.772	Pan_troglodytes
ENSNBRG00000014262	polr3a	100	88.201	ENSPANG00000022508	POLR3A	98	91.772	Papio_anubis
ENSNBRG00000014262	polr3a	100	91.079	ENSPKIG00000008140	polr3a	100	92.123	Paramormyrops_kingsleyae
ENSNBRG00000014262	polr3a	98	88.532	ENSPSIG00000002092	POLR3A	100	88.532	Pelodiscus_sinensis
ENSNBRG00000014262	polr3a	100	87.842	ENSPEMG00000006768	Polr3a	100	87.842	Peromyscus_maniculatus_bairdii
ENSNBRG00000014262	polr3a	100	88.201	ENSPCIG00000015842	POLR3A	100	88.201	Phascolarctos_cinereus
ENSNBRG00000014262	polr3a	53	91.946	ENSPFOG00000006458	polr3a	100	91.946	Poecilia_formosa
ENSNBRG00000014262	polr3a	100	93.597	ENSPLAG00000000997	polr3a	100	93.597	Poecilia_latipinna
ENSNBRG00000014262	polr3a	100	93.525	ENSPMEG00000006821	polr3a	100	93.525	Poecilia_mexicana
ENSNBRG00000014262	polr3a	100	93.309	ENSPREG00000002385	polr3a	100	93.309	Poecilia_reticulata
ENSNBRG00000014262	polr3a	93	88.053	ENSPPYG00000002305	POLR3A	99	88.053	Pongo_abelii
ENSNBRG00000014262	polr3a	84	78.053	ENSPCAG00000005690	POLR3A	87	78.053	Procavia_capensis
ENSNBRG00000014262	polr3a	100	88.129	ENSPCOG00000028311	POLR3A	100	88.129	Propithecus_coquereli
ENSNBRG00000014262	polr3a	100	86.906	ENSPVAG00000015553	POLR3A	100	86.906	Pteropus_vampyrus
ENSNBRG00000014262	polr3a	100	96.835	ENSPNYG00000020987	polr3a	100	96.835	Pundamilia_nyererei
ENSNBRG00000014262	polr3a	99	87.032	ENSPNAG00000006629	polr3a	99	87.032	Pygocentrus_nattereri
ENSNBRG00000014262	polr3a	100	87.986	ENSRNOG00000010008	Polr3a	100	87.986	Rattus_norvegicus
ENSNBRG00000014262	polr3a	100	84.748	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSNBRG00000014262	polr3a	100	90.000	ENSRROG00000025527	POLR3A	100	90.000	Rhinopithecus_roxellana
ENSNBRG00000014262	polr3a	94	54.907	YOR116C	RPO31	90	54.907	Saccharomyces_cerevisiae
ENSNBRG00000014262	polr3a	100	88.201	ENSSBOG00000022199	POLR3A	100	88.201	Saimiri_boliviensis_boliviensis
ENSNBRG00000014262	polr3a	100	88.129	ENSSHAG00000007588	POLR3A	94	88.129	Sarcophilus_harrisii
ENSNBRG00000014262	polr3a	100	91.151	ENSSFOG00015014357	polr3a	100	91.151	Scleropages_formosus
ENSNBRG00000014262	polr3a	100	93.741	ENSSMAG00000001780	polr3a	100	93.741	Scophthalmus_maximus
ENSNBRG00000014262	polr3a	100	94.532	ENSSDUG00000019840	polr3a	100	94.532	Seriola_dumerili
ENSNBRG00000014262	polr3a	100	94.532	ENSSLDG00000023908	polr3a	100	94.532	Seriola_lalandi_dorsalis
ENSNBRG00000014262	polr3a	68	88.715	ENSSARG00000009916	POLR3A	89	88.715	Sorex_araneus
ENSNBRG00000014262	polr3a	100	88.253	ENSSPUG00000013209	POLR3A	100	88.253	Sphenodon_punctatus
ENSNBRG00000014262	polr3a	100	94.388	ENSSPAG00000017712	polr3a	100	94.388	Stegastes_partitus
ENSNBRG00000014262	polr3a	100	88.129	ENSSSCG00000010327	POLR3A	100	89.362	Sus_scrofa
ENSNBRG00000014262	polr3a	100	88.561	ENSTGUG00000006423	-	100	88.561	Taeniopygia_guttata
ENSNBRG00000014262	polr3a	100	93.094	ENSTRUG00000013488	polr3a	100	93.094	Takifugu_rubripes
ENSNBRG00000014262	polr3a	100	92.960	ENSTNIG00000013151	polr3a	100	92.960	Tetraodon_nigroviridis
ENSNBRG00000014262	polr3a	70	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSNBRG00000014262	polr3a	100	82.374	ENSTTRG00000007817	POLR3A	100	82.374	Tursiops_truncatus
ENSNBRG00000014262	polr3a	100	85.899	ENSUAMG00000011283	POLR3A	100	85.899	Ursus_americanus
ENSNBRG00000014262	polr3a	100	88.273	ENSUMAG00000013913	POLR3A	100	88.273	Ursus_maritimus
ENSNBRG00000014262	polr3a	99	80.145	ENSVPAG00000003285	POLR3A	100	80.145	Vicugna_pacos
ENSNBRG00000014262	polr3a	100	88.201	ENSVVUG00000025523	POLR3A	100	88.201	Vulpes_vulpes
ENSNBRG00000014262	polr3a	86	88.471	ENSXETG00000018101	polr3a	100	88.471	Xenopus_tropicalis
ENSNBRG00000014262	polr3a	100	93.453	ENSXMAG00000015213	polr3a	100	93.453	Xiphophorus_maculatus