EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5424 bases
Position: chrJH422398.1:844136-849559
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018821	RRM_1	PF00076.22	1.5e-34	1	2
ENSNBRP00000018821	RRM_1	PF00076.22	1.5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019323	-	648	-	ENSNBRP00000018821	215 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000014469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014469	-	56	35.802	ENSNBRG00000023764	-	62	35.802
ENSNBRG00000014469	-	66	36.620	ENSNBRG00000018002	zgc:110796	76	36.620
ENSNBRG00000014469	-	72	30.337	ENSNBRG00000011418	celf5a	50	30.337
ENSNBRG00000014469	-	89	35.417	ENSNBRG00000000841	-	58	35.417
ENSNBRG00000014469	-	76	35.802	ENSNBRG00000021290	elavl1a	66	35.802
ENSNBRG00000014469	-	91	34.737	ENSNBRG00000014596	msi2a	79	34.586
ENSNBRG00000014469	-	82	60.227	ENSNBRG00000018441	-	59	57.592
ENSNBRG00000014469	-	85	37.436	ENSNBRG00000004605	dazap1	56	37.436
ENSNBRG00000014469	-	83	75.843	ENSNBRG00000014522	-	81	74.054
ENSNBRG00000014469	-	82	60.227	ENSNBRG00000011082	HNRNPA1P48	76	60.227
ENSNBRG00000014469	-	81	39.773	ENSNBRG00000011408	hnrnpaba	62	39.326
ENSNBRG00000014469	-	81	40.449	ENSNBRG00000014795	-	55	40.449
ENSNBRG00000014469	-	85	33.684	ENSNBRG00000006706	tardbpl	61	32.653
ENSNBRG00000014469	-	79	36.471	ENSNBRG00000019548	hnrnpd	53	36.047
ENSNBRG00000014469	-	75	43.902	ENSNBRG00000019658	cirbpa	62	43.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014469	-	91	56.345	ENSAPOG00000019369	-	61	56.345	Acanthochromis_polyacanthus
ENSNBRG00000014469	-	83	76.404	ENSACIG00000021815	-	95	72.165	Amphilophus_citrinellus
ENSNBRG00000014469	-	91	56.345	ENSAOCG00000005289	-	60	56.345	Amphiprion_ocellaris
ENSNBRG00000014469	-	91	56.345	ENSAPEG00000004179	-	60	56.345	Amphiprion_percula
ENSNBRG00000014469	-	87	56.915	ENSATEG00000022918	hnrnpa1a	92	56.915	Anabas_testudineus
ENSNBRG00000014469	-	82	96.273	ENSATEG00000003423	-	76	96.273	Anabas_testudineus
ENSNBRG00000014469	-	82	68.927	ENSACAG00000017109	-	54	68.927	Anolis_carolinensis
ENSNBRG00000014469	-	82	60.227	ENSACLG00000006940	-	58	57.592	Astatotilapia_calliptera
ENSNBRG00000014469	-	82	81.818	ENSAMXG00000037730	-	53	81.818	Astyanax_mexicanus
ENSNBRG00000014469	-	87	55.789	ENSCSEG00000007589	hnrnpa1a	67	58.523	Cynoglossus_semilaevis
ENSNBRG00000014469	-	82	84.091	ENSCSEG00000014051	-	72	84.091	Cynoglossus_semilaevis
ENSNBRG00000014469	-	82	60.227	ENSCVAG00000012637	hnrnpa1a	57	58.511	Cyprinodon_variegatus
ENSNBRG00000014469	-	84	69.061	ENSDORG00000026425	-	55	64.975	Dipodomys_ordii
ENSNBRG00000014469	-	87	55.263	ENSELUG00000007372	-	50	57.955	Esox_lucius
ENSNBRG00000014469	-	83	78.212	ENSGMOG00000020353	-	97	76.882	Gadus_morhua
ENSNBRG00000014469	-	83	75.281	ENSGAFG00000016803	-	55	73.514	Gambusia_affinis
ENSNBRG00000014469	-	87	58.511	ENSGAFG00000007751	-	57	58.511	Gambusia_affinis
ENSNBRG00000014469	-	82	60.227	ENSHBUG00000005647	hnrnpa1a	59	57.592	Haplochromis_burtoni
ENSNBRG00000014469	-	82	59.659	ENSIPUG00000022440	-	82	54.974	Ictalurus_punctatus
ENSNBRG00000014469	-	88	57.714	ENSIPUG00000002023	hnrnpa1a	72	57.714	Ictalurus_punctatus
ENSNBRG00000014469	-	83	82.584	ENSIPUG00000001991	-	79	80.108	Ictalurus_punctatus
ENSNBRG00000014469	-	82	59.091	ENSKMAG00000020859	-	57	57.447	Kryptolebias_marmoratus
ENSNBRG00000014469	-	82	59.091	ENSLBEG00000010010	hnrnpa1a	52	59.091	Labrus_bergylta
ENSNBRG00000014469	-	82	52.809	ENSMFAG00000028351	-	56	51.872	Macaca_fascicularis
ENSNBRG00000014469	-	84	58.333	ENSMAMG00000007606	-	53	59.091	Mastacembelus_armatus
ENSNBRG00000014469	-	82	60.227	ENSMZEG00005027173	hnrnpa1a	58	57.592	Maylandia_zebra
ENSNBRG00000014469	-	82	58.523	ENSMMOG00000008251	hnrnpa1a	75	58.523	Mola_mola
ENSNBRG00000014469	-	83	75.281	ENSMALG00000008886	-	99	68.473	Monopterus_albus
ENSNBRG00000014469	-	82	58.523	ENSMALG00000014091	hnrnpa1a	52	58.523	Monopterus_albus
ENSNBRG00000014469	-	93	70.370	ENSORLG00000029240	-	99	70.370	Oryzias_latipes
ENSNBRG00000014469	-	82	60.227	ENSORLG00000008001	-	58	58.511	Oryzias_latipes
ENSNBRG00000014469	-	82	60.227	ENSORLG00020006582	hnrnpa1a	87	58.824	Oryzias_latipes_hni
ENSNBRG00000014469	-	80	74.566	ENSORLG00020006043	-	60	74.566	Oryzias_latipes_hni
ENSNBRG00000014469	-	93	67.164	ENSORLG00020022498	-	91	67.164	Oryzias_latipes_hni
ENSNBRG00000014469	-	82	60.227	ENSORLG00015022294	-	58	58.511	Oryzias_latipes_hsok
ENSNBRG00000014469	-	82	60.227	ENSOMEG00000015959	-	58	58.511	Oryzias_melastigma
ENSNBRG00000014469	-	84	59.444	ENSPMGG00000011804	hnrnpa1a	76	59.444	Periophthalmus_magnuspinnatus
ENSNBRG00000014469	-	82	86.286	ENSPMGG00000016392	-	94	86.286	Periophthalmus_magnuspinnatus
ENSNBRG00000014469	-	87	58.511	ENSPFOG00000001825	-	57	58.511	Poecilia_formosa
ENSNBRG00000014469	-	87	58.511	ENSPMEG00000002425	-	57	58.511	Poecilia_mexicana
ENSNBRG00000014469	-	90	100.000	ENSPNYG00000020729	-	99	100.000	Pundamilia_nyererei
ENSNBRG00000014469	-	86	57.754	ENSPNAG00000021630	-	59	57.754	Pygocentrus_nattereri
ENSNBRG00000014469	-	88	59.211	ENSPNAG00000007752	hnrnpa1a	76	56.757	Pygocentrus_nattereri
ENSNBRG00000014469	-	82	88.690	ENSSMAG00000010279	-	94	88.690	Scophthalmus_maximus
ENSNBRG00000014469	-	83	71.910	ENSSMAG00000010246	-	79	71.910	Scophthalmus_maximus
ENSNBRG00000014469	-	82	59.091	ENSSMAG00000004641	hnrnpa1a	59	59.091	Scophthalmus_maximus
ENSNBRG00000014469	-	85	58.791	ENSSDUG00000013908	hnrnpa1a	85	58.791	Seriola_dumerili
ENSNBRG00000014469	-	80	95.954	ENSSDUG00000002431	-	82	95.954	Seriola_dumerili
ENSNBRG00000014469	-	84	58.333	ENSSLDG00000003718	hnrnpa1a	83	56.250	Seriola_lalandi_dorsalis
ENSNBRG00000014469	-	87	57.895	ENSSPAG00000018518	-	59	57.895	Stegastes_partitus
ENSNBRG00000014469	-	82	57.386	ENSTRUG00000020491	-	55	57.386	Takifugu_rubripes
ENSNBRG00000014469	-	86	85.946	ENSTNIG00000007398	-	75	81.407	Tetraodon_nigroviridis
ENSNBRG00000014469	-	84	58.889	ENSXCOG00000009001	-	83	57.979	Xiphophorus_couchianus
ENSNBRG00000014469	-	87	57.979	ENSXMAG00000008076	-	56	57.979	Xiphophorus_maculatus