EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000014492 (Gene tree)
Gene ID: 102778999
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle subunit SRP72-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 8303 bases
Position: chrJH422331.1:3319633-3327935
Accession: 102778999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018839	SRP72	PF08492.12	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019342	-	1965	XM_006798931	ENSNBRP00000018839	654 (aa)	XP_006798994	-

Gene Model

Click here to download ENSNBRG00000014492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014492	srp72	97	73.773	ENSG00000174780	SRP72	99	73.952	Homo_sapiens
ENSNBRG00000014492	srp72	99	77.594	ENSAPOG00000019438	srp72	99	79.398	Acanthochromis_polyacanthus
ENSNBRG00000014492	srp72	96	74.068	ENSAMEG00000008469	SRP72	99	74.102	Ailuropoda_melanoleuca
ENSNBRG00000014492	srp72	100	92.687	ENSACIG00000000488	srp72	100	92.687	Amphilophus_citrinellus
ENSNBRG00000014492	srp72	100	88.922	ENSAOCG00000011256	srp72	100	90.719	Amphiprion_ocellaris
ENSNBRG00000014492	srp72	100	90.120	ENSAPEG00000001512	srp72	100	90.569	Amphiprion_percula
ENSNBRG00000014492	srp72	91	93.365	ENSATEG00000006781	srp72	99	89.756	Anabas_testudineus
ENSNBRG00000014492	srp72	99	73.112	ENSAPLG00000008751	SRP72	98	73.112	Anas_platyrhynchos
ENSNBRG00000014492	srp72	97	72.798	ENSACAG00000002381	SRP72	98	72.605	Anolis_carolinensis
ENSNBRG00000014492	srp72	94	73.934	ENSANAG00000020836	-	95	73.354	Aotus_nancymaae
ENSNBRG00000014492	srp72	100	94.611	ENSACLG00000014617	srp72	100	94.611	Astatotilapia_calliptera
ENSNBRG00000014492	srp72	98	79.205	ENSAMXG00000004011	srp72	100	79.223	Astyanax_mexicanus
ENSNBRG00000014492	srp72	97	73.466	ENSBTAG00000010593	SRP72	99	73.653	Bos_taurus
ENSNBRG00000014492	srp72	97	72.853	ENSCJAG00000017998	SRP72	99	73.054	Callithrix_jacchus
ENSNBRG00000014492	srp72	97	74.080	ENSCAFG00000002244	SRP72	99	74.251	Canis_familiaris
ENSNBRG00000014492	srp72	97	74.080	ENSCAFG00020027338	SRP72	98	73.973	Canis_lupus_dingo
ENSNBRG00000014492	srp72	97	71.975	ENSCHIG00000021465	SRP72	99	72.197	Capra_hircus
ENSNBRG00000014492	srp72	97	74.228	ENSTSYG00000010571	-	100	73.451	Carlito_syrichta
ENSNBRG00000014492	srp72	80	55.762	ENSCAPG00000016668	SRP72	100	59.302	Cavia_aperea
ENSNBRG00000014492	srp72	97	73.006	ENSCPOG00000000218	SRP72	99	73.653	Cavia_porcellus
ENSNBRG00000014492	srp72	97	71.275	ENSCCAG00000030830	-	99	71.514	Cebus_capucinus
ENSNBRG00000014492	srp72	94	73.892	ENSCCAG00000030683	-	95	73.312	Cebus_capucinus
ENSNBRG00000014492	srp72	98	58.896	ENSCATG00000045359	-	95	58.742	Cercocebus_atys
ENSNBRG00000014492	srp72	97	73.620	ENSCATG00000008072	SRP72	99	73.802	Cercocebus_atys
ENSNBRG00000014492	srp72	97	73.313	ENSCLAG00000003571	SRP72	99	73.653	Chinchilla_lanigera
ENSNBRG00000014492	srp72	97	70.200	ENSCSAG00000005079	SRP72	99	70.315	Chlorocebus_sabaeus
ENSNBRG00000014492	srp72	89	78.070	ENSCHOG00000013240	SRP72	89	78.070	Choloepus_hoffmanni
ENSNBRG00000014492	srp72	96	73.561	ENSCPBG00000015015	SRP72	99	73.204	Chrysemys_picta_bellii
ENSNBRG00000014492	srp72	95	39.517	ENSCING00000002417	-	98	39.296	Ciona_intestinalis
ENSNBRG00000014492	srp72	93	40.062	ENSCSAVG00000011288	-	97	41.037	Ciona_savignyi
ENSNBRG00000014492	srp72	97	73.620	ENSCANG00000041709	SRP72	99	73.802	Colobus_angolensis_palliatus
ENSNBRG00000014492	srp72	99	50.835	ENSCANG00000037920	-	98	56.723	Colobus_angolensis_palliatus
ENSNBRG00000014492	srp72	99	73.802	ENSCGRG00001013548	Srp72	99	73.802	Cricetulus_griseus_chok1gshd
ENSNBRG00000014492	srp72	95	73.858	ENSCGRG00000003013	Srp72	99	73.858	Cricetulus_griseus_crigri
ENSNBRG00000014492	srp72	98	87.136	ENSCSEG00000003616	srp72	100	87.725	Cynoglossus_semilaevis
ENSNBRG00000014492	srp72	91	88.506	ENSCVAG00000001520	srp72	100	88.998	Cyprinodon_variegatus
ENSNBRG00000014492	srp72	85	78.596	ENSDARG00000014139	srp72	99	78.451	Danio_rerio
ENSNBRG00000014492	srp72	97	69.878	ENSDNOG00000039012	SRP72	83	70.149	Dasypus_novemcinctus
ENSNBRG00000014492	srp72	96	73.375	ENSDORG00000000171	Srp72	99	73.353	Dipodomys_ordii
ENSNBRG00000014492	srp72	95	39.104	FBgn0038810	Srp72	98	38.906	Drosophila_melanogaster
ENSNBRG00000014492	srp72	96	73.602	ENSETEG00000005191	SRP72	99	73.802	Echinops_telfairi
ENSNBRG00000014492	srp72	73	63.821	ENSEBUG00000003696	srp72	97	64.609	Eptatretus_burgeri
ENSNBRG00000014492	srp72	97	73.773	ENSEASG00005017747	SRP72	99	73.952	Equus_asinus_asinus
ENSNBRG00000014492	srp72	97	73.620	ENSECAG00000006920	SRP72	99	73.802	Equus_caballus
ENSNBRG00000014492	srp72	100	80.386	ENSELUG00000022415	srp72	100	80.386	Esox_lucius
ENSNBRG00000014492	srp72	97	74.074	ENSFCAG00000027600	SRP72	99	74.251	Felis_catus
ENSNBRG00000014492	srp72	96	74.068	ENSFALG00000006713	SRP72	99	74.141	Ficedula_albicollis
ENSNBRG00000014492	srp72	96	46.322	ENSFDAG00000009793	-	94	45.016	Fukomys_damarensis
ENSNBRG00000014492	srp72	97	73.006	ENSFDAG00000002014	-	99	73.204	Fukomys_damarensis
ENSNBRG00000014492	srp72	100	86.996	ENSFHEG00000017652	srp72	92	88.640	Fundulus_heteroclitus
ENSNBRG00000014492	srp72	98	77.744	ENSGMOG00000005986	srp72	99	78.092	Gadus_morhua
ENSNBRG00000014492	srp72	96	74.495	ENSGALG00000011403	SRP72	99	73.952	Gallus_gallus
ENSNBRG00000014492	srp72	100	87.294	ENSGAFG00000017762	srp72	100	87.743	Gambusia_affinis
ENSNBRG00000014492	srp72	100	86.547	ENSGACG00000016749	srp72	99	86.996	Gasterosteus_aculeatus
ENSNBRG00000014492	srp72	86	73.657	ENSGAGG00000024611	SRP72	98	73.862	Gopherus_agassizii
ENSNBRG00000014492	srp72	97	73.160	ENSGGOG00000013234	-	99	73.353	Gorilla_gorilla
ENSNBRG00000014492	srp72	100	94.760	ENSHBUG00000020723	srp72	100	94.760	Haplochromis_burtoni
ENSNBRG00000014492	srp72	97	73.313	ENSHGLG00000009791	SRP72	99	73.503	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	50	62.997	ENSHGLG00000003496	-	99	62.874	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	97	68.372	ENSHGLG00000005029	-	99	68.230	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	90	63.684	ENSHGLG00000010633	-	99	64.644	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	97	58.255	ENSHGLG00000018597	-	99	59.237	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	86	69.778	ENSHGLG00000003950	-	99	69.778	Heterocephalus_glaber_female
ENSNBRG00000014492	srp72	86	69.333	ENSHGLG00100017133	-	99	69.333	Heterocephalus_glaber_male
ENSNBRG00000014492	srp72	97	68.372	ENSHGLG00100011236	-	99	68.230	Heterocephalus_glaber_male
ENSNBRG00000014492	srp72	97	73.313	ENSHGLG00100009021	SRP72	99	73.503	Heterocephalus_glaber_male
ENSNBRG00000014492	srp72	91	57.596	ENSHGLG00100009346	-	99	56.012	Heterocephalus_glaber_male
ENSNBRG00000014492	srp72	98	85.605	ENSHCOG00000013760	srp72	100	86.228	Hippocampus_comes
ENSNBRG00000014492	srp72	100	79.970	ENSIPUG00000000210	srp72	100	79.970	Ictalurus_punctatus
ENSNBRG00000014492	srp72	97	73.773	ENSSTOG00000007305	SRP72	99	73.952	Ictidomys_tridecemlineatus
ENSNBRG00000014492	srp72	96	73.561	ENSJJAG00000018324	Srp72	99	73.503	Jaculus_jaculus
ENSNBRG00000014492	srp72	100	86.697	ENSKMAG00000003776	srp72	100	86.697	Kryptolebias_marmoratus
ENSNBRG00000014492	srp72	98	79.664	ENSLOCG00000002628	srp72	98	79.514	Lepisosteus_oculatus
ENSNBRG00000014492	srp72	97	73.620	ENSLAFG00000018307	SRP72	99	73.802	Loxodonta_africana
ENSNBRG00000014492	srp72	97	73.620	ENSMFAG00000031065	SRP72	99	73.802	Macaca_fascicularis
ENSNBRG00000014492	srp72	98	59.356	ENSMFAG00000037164	-	97	59.598	Macaca_fascicularis
ENSNBRG00000014492	srp72	94	54.372	ENSMMUG00000021262	-	95	54.213	Macaca_mulatta
ENSNBRG00000014492	srp72	98	73.588	ENSMMUG00000016368	SRP72	97	73.588	Macaca_mulatta
ENSNBRG00000014492	srp72	97	73.620	ENSMNEG00000038065	-	99	73.802	Macaca_nemestrina
ENSNBRG00000014492	srp72	94	73.144	ENSMLEG00000030140	-	94	72.670	Mandrillus_leucophaeus
ENSNBRG00000014492	srp72	100	89.222	ENSMAMG00000014989	srp72	88	89.671	Mastacembelus_armatus
ENSNBRG00000014492	srp72	100	94.760	ENSMZEG00005003325	srp72	100	94.760	Maylandia_zebra
ENSNBRG00000014492	srp72	93	70.000	ENSMGAG00000008567	SRP72	100	72.068	Meleagris_gallopavo
ENSNBRG00000014492	srp72	99	73.485	ENSMAUG00000001237	Srp72	99	73.353	Mesocricetus_auratus
ENSNBRG00000014492	srp72	94	73.934	ENSMICG00000008507	-	94	73.934	Microcebus_murinus
ENSNBRG00000014492	srp72	99	73.503	ENSMOCG00000020309	Srp72	99	73.503	Microtus_ochrogaster
ENSNBRG00000014492	srp72	100	86.527	ENSMMOG00000002627	srp72	100	86.976	Mola_mola
ENSNBRG00000014492	srp72	96	69.984	ENSMODG00000020697	SRP72	99	70.210	Monodelphis_domestica
ENSNBRG00000014492	srp72	100	88.174	ENSMALG00000003747	srp72	100	88.623	Monopterus_albus
ENSNBRG00000014492	srp72	99	73.503	MGP_CAROLIEiJ_G0027323	Srp72	99	73.503	Mus_caroli
ENSNBRG00000014492	srp72	99	73.503	ENSMUSG00000036323	Srp72	99	73.503	Mus_musculus
ENSNBRG00000014492	srp72	99	73.946	MGP_PahariEiJ_G0017103	Srp72	99	73.802	Mus_pahari
ENSNBRG00000014492	srp72	99	73.503	MGP_SPRETEiJ_G0028317	Srp72	99	73.503	Mus_spretus
ENSNBRG00000014492	srp72	96	74.068	ENSMPUG00000004828	SRP72	99	74.102	Mustela_putorius_furo
ENSNBRG00000014492	srp72	96	73.643	ENSMLUG00000007344	SRP72	99	73.692	Myotis_lucifugus
ENSNBRG00000014492	srp72	100	73.958	ENSNGAG00000012595	Srp72	100	73.958	Nannospalax_galili
ENSNBRG00000014492	srp72	97	68.664	ENSNLEG00000008806	-	99	68.862	Nomascus_leucogenys
ENSNBRG00000014492	srp72	85	75.000	ENSMEUG00000005164	SRP72	86	76.577	Notamacropus_eugenii
ENSNBRG00000014492	srp72	96	72.006	ENSOPRG00000012521	SRP72	99	72.156	Ochotona_princeps
ENSNBRG00000014492	srp72	96	71.739	ENSODEG00000012214	SRP72	99	72.006	Octodon_degus
ENSNBRG00000014492	srp72	100	94.162	ENSONIG00000001446	srp72	99	94.611	Oreochromis_niloticus
ENSNBRG00000014492	srp72	81	76.289	ENSOANG00000008562	SRP72	80	74.257	Ornithorhynchus_anatinus
ENSNBRG00000014492	srp72	97	73.425	ENSOCUG00000012226	SRP72	99	73.653	Oryctolagus_cuniculus
ENSNBRG00000014492	srp72	100	84.281	ENSORLG00000020418	srp72	99	85.180	Oryzias_latipes
ENSNBRG00000014492	srp72	100	83.982	ENSORLG00020009138	srp72	97	84.880	Oryzias_latipes_hni
ENSNBRG00000014492	srp72	100	84.132	ENSORLG00015018251	srp72	99	85.030	Oryzias_latipes_hsok
ENSNBRG00000014492	srp72	98	84.885	ENSOMEG00000022008	srp72	98	85.736	Oryzias_melastigma
ENSNBRG00000014492	srp72	97	74.387	ENSOGAG00000003578	SRP72	99	74.701	Otolemur_garnettii
ENSNBRG00000014492	srp72	97	73.313	ENSOARG00000004329	SRP72	99	73.503	Ovis_aries
ENSNBRG00000014492	srp72	82	57.875	ENSPPAG00000032490	-	93	57.818	Pan_paniscus
ENSNBRG00000014492	srp72	99	52.121	ENSPPAG00000011428	-	95	52.432	Pan_paniscus
ENSNBRG00000014492	srp72	97	73.773	ENSPPAG00000042265	SRP72	99	73.952	Pan_paniscus
ENSNBRG00000014492	srp72	96	74.068	ENSPPRG00000015991	SRP72	99	74.251	Panthera_pardus
ENSNBRG00000014492	srp72	96	74.068	ENSPTIG00000018786	SRP72	99	74.251	Panthera_tigris_altaica
ENSNBRG00000014492	srp72	80	58.537	ENSPTRG00000043609	-	96	56.591	Pan_troglodytes
ENSNBRG00000014492	srp72	97	73.773	ENSPTRG00000048466	-	99	73.952	Pan_troglodytes
ENSNBRG00000014492	srp72	99	53.788	ENSPTRG00000048100	-	95	54.046	Pan_troglodytes
ENSNBRG00000014492	srp72	94	58.544	ENSPANG00000030230	-	97	58.786	Papio_anubis
ENSNBRG00000014492	srp72	97	73.620	ENSPANG00000005495	SRP72	99	73.802	Papio_anubis
ENSNBRG00000014492	srp72	93	73.323	ENSPSIG00000003003	SRP72	100	73.520	Pelodiscus_sinensis
ENSNBRG00000014492	srp72	99	73.485	ENSPEMG00000012828	-	99	73.353	Peromyscus_maniculatus_bairdii
ENSNBRG00000014492	srp72	97	73.261	ENSPCIG00000000732	SRP72	99	73.353	Phascolarctos_cinereus
ENSNBRG00000014492	srp72	100	87.294	ENSPFOG00000003480	srp72	100	87.743	Poecilia_formosa
ENSNBRG00000014492	srp72	100	87.294	ENSPLAG00000020122	srp72	100	87.743	Poecilia_latipinna
ENSNBRG00000014492	srp72	100	87.145	ENSPMEG00000019988	srp72	100	87.145	Poecilia_mexicana
ENSNBRG00000014492	srp72	100	87.444	ENSPREG00000006218	srp72	100	87.892	Poecilia_reticulata
ENSNBRG00000014492	srp72	98	73.628	ENSPPYG00000014752	-	78	73.810	Pongo_abelii
ENSNBRG00000014492	srp72	56	58.747	ENSPPYG00000009152	-	97	58.355	Pongo_abelii
ENSNBRG00000014492	srp72	97	72.546	ENSPVAG00000005590	SRP72	99	72.754	Pteropus_vampyrus
ENSNBRG00000014492	srp72	100	94.760	ENSPNYG00000001916	srp72	100	94.760	Pundamilia_nyererei
ENSNBRG00000014492	srp72	100	81.465	ENSPNAG00000022424	srp72	100	81.465	Pygocentrus_nattereri
ENSNBRG00000014492	srp72	99	71.407	ENSRNOG00000002100	LOC108348180	99	72.006	Rattus_norvegicus
ENSNBRG00000014492	srp72	99	56.541	ENSRBIG00000029328	-	98	56.186	Rhinopithecus_bieti
ENSNBRG00000014492	srp72	97	68.510	ENSRBIG00000042069	SRP72	99	68.816	Rhinopithecus_bieti
ENSNBRG00000014492	srp72	97	73.620	ENSRROG00000035704	SRP72	99	73.802	Rhinopithecus_roxellana
ENSNBRG00000014492	srp72	93	72.625	ENSSHAG00000000614	SRP72	99	70.387	Sarcophilus_harrisii
ENSNBRG00000014492	srp72	100	79.970	ENSSFOG00015002026	srp72	100	79.970	Scleropages_formosus
ENSNBRG00000014492	srp72	100	85.246	ENSSMAG00000007639	srp72	100	87.183	Scophthalmus_maximus
ENSNBRG00000014492	srp72	100	90.120	ENSSDUG00000007345	srp72	98	90.569	Seriola_dumerili
ENSNBRG00000014492	srp72	100	90.269	ENSSLDG00000021819	srp72	98	90.719	Seriola_lalandi_dorsalis
ENSNBRG00000014492	srp72	73	69.816	ENSSARG00000005804	SRP72	76	70.277	Sorex_araneus
ENSNBRG00000014492	srp72	96	73.872	ENSSPUG00000009740	SRP72	97	73.893	Sphenodon_punctatus
ENSNBRG00000014492	srp72	100	91.168	ENSSPAG00000011565	srp72	100	91.617	Stegastes_partitus
ENSNBRG00000014492	srp72	99	71.536	ENSSSCG00000008900	SRP72	99	71.407	Sus_scrofa
ENSNBRG00000014492	srp72	96	74.419	ENSTGUG00000004767	SRP72	99	73.881	Taeniopygia_guttata
ENSNBRG00000014492	srp72	98	84.839	ENSTRUG00000009831	srp72	100	85.479	Takifugu_rubripes
ENSNBRG00000014492	srp72	100	86.228	ENSTNIG00000013073	srp72	99	86.228	Tetraodon_nigroviridis
ENSNBRG00000014492	srp72	78	79.817	ENSTBEG00000007394	SRP72	79	80.800	Tupaia_belangeri
ENSNBRG00000014492	srp72	92	73.183	ENSTTRG00000010945	SRP72	100	73.386	Tursiops_truncatus
ENSNBRG00000014492	srp72	57	72.208	ENSUAMG00000001701	SRP72	99	73.116	Ursus_americanus
ENSNBRG00000014492	srp72	96	73.913	ENSUMAG00000008151	SRP72	99	73.952	Ursus_maritimus
ENSNBRG00000014492	srp72	97	72.699	ENSVPAG00000000458	SRP72	99	72.904	Vicugna_pacos
ENSNBRG00000014492	srp72	97	73.926	ENSVVUG00000006020	SRP72	99	74.102	Vulpes_vulpes
ENSNBRG00000014492	srp72	95	70.330	ENSXETG00000010205	srp72	100	70.330	Xenopus_tropicalis
ENSNBRG00000014492	srp72	100	87.444	ENSXMAG00000018000	srp72	99	87.575	Xiphophorus_maculatus