EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014522 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4473 bases
Position: chrJH422398.1:849637-854109
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018855	RRM_1	PF00076.22	8.6e-33	1	2
ENSNBRP00000018855	RRM_1	PF00076.22	8.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019359	-	684	-	ENSNBRP00000018855	227 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000014522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014522	-	71	31.548	ENSNBRG00000016633	pabpc1l	54	31.548
ENSNBRG00000014522	-	87	37.209	ENSNBRG00000004605	dazap1	52	40.110
ENSNBRG00000014522	-	75	37.647	ENSNBRG00000011408	hnrnpaba	58	37.647
ENSNBRG00000014522	-	62	38.028	ENSNBRG00000018002	zgc:110796	76	38.028
ENSNBRG00000014522	-	86	41.361	ENSNBRG00000000841	-	53	40.341
ENSNBRG00000014522	-	83	52.910	ENSNBRG00000011082	HNRNPA1P48	74	53.977
ENSNBRG00000014522	-	75	38.235	ENSNBRG00000014795	-	52	38.235
ENSNBRG00000014522	-	67	31.056	ENSNBRG00000013737	pabpc1b	53	30.508
ENSNBRG00000014522	-	66	41.071	ENSNBRG00000022760	-	56	32.653
ENSNBRG00000014522	-	81	74.054	ENSNBRG00000014469	-	83	75.843
ENSNBRG00000014522	-	88	52.358	ENSNBRG00000018441	-	54	56.742
ENSNBRG00000014522	-	83	38.547	ENSNBRG00000014596	msi2a	79	36.842
ENSNBRG00000014522	-	89	37.624	ENSNBRG00000019548	hnrnpd	52	37.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014522	-	79	37.778	WBGene00019249	H28G03.1	56	37.778	Caenorhabditis_elegans
ENSNBRG00000014522	-	77	46.893	ENSCING00000004062	-	55	46.893	Ciona_intestinalis
ENSNBRG00000014522	-	81	43.716	ENSCSAVG00000000472	-	88	44.944	Ciona_savignyi
ENSNBRG00000014522	-	79	89.944	ENSMMOG00000004241	-	88	89.944	Mola_mola
ENSNBRG00000014522	-	85	94.845	ENSSLDG00000024705	-	87	94.872	Seriola_lalandi_dorsalis