EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014596 (Gene tree)
Gene ID: 102796492
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 250432 bases
Position: chrJH422337.1:2248807-2499238
Accession: 102796492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000018941	RRM_1	PF00076.22	5.4e-33	1	2
ENSNBRP00000018941	RRM_1	PF00076.22	5.4e-33	2	2
ENSNBRP00000018959	RRM_1	PF00076.22	5.7e-29	1	2
ENSNBRP00000018959	RRM_1	PF00076.22	5.7e-29	2	2
ENSNBRP00000018948	RRM_1	PF00076.22	1.5e-26	1	2
ENSNBRP00000018948	RRM_1	PF00076.22	1.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019447	-	1347	XM_006799513	ENSNBRP00000018941	388 (aa)	XP_006799576	UPI00032A2F70
ENSNBRT00000019466	-	942	-	ENSNBRP00000018959	313 (aa)	-	-
ENSNBRT00000019454	-	652	-	ENSNBRP00000018948	166 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000014596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014596	msi2a	79	43.333	ENSNBRG00000011082	HNRNPA1P48	73	41.860
ENSNBRG00000014596	msi2a	61	30.769	ENSNBRG00000022760	-	53	30.769
ENSNBRG00000014596	msi2a	82	50.735	ENSNBRG00000011408	hnrnpaba	67	48.187
ENSNBRG00000014596	msi2a	92	80.263	ENSNBRG00000000841	-	100	70.997
ENSNBRG00000014596	msi2a	80	66.304	ENSNBRG00000018002	zgc:110796	98	66.304
ENSNBRG00000014596	msi2a	98	47.134	ENSNBRG00000014795	-	77	41.463
ENSNBRG00000014596	msi2a	83	51.095	ENSNBRG00000019548	hnrnpd	53	51.095
ENSNBRG00000014596	msi2a	79	36.842	ENSNBRG00000014522	-	83	38.547
ENSNBRG00000014596	msi2a	92	61.066	ENSNBRG00000018012	MSI1	99	61.066
ENSNBRG00000014596	msi2a	79	42.857	ENSNBRG00000018441	-	74	34.694
ENSNBRG00000014596	msi2a	91	51.020	ENSNBRG00000004605	dazap1	53	51.020
ENSNBRG00000014596	msi2a	79	34.586	ENSNBRG00000014469	-	91	34.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014596	msi2a	100	87.805	ENSG00000153944	MSI2	100	87.805	Homo_sapiens
ENSNBRG00000014596	msi2a	100	99.361	ENSAPOG00000001658	msi2a	100	99.588	Acanthochromis_polyacanthus
ENSNBRG00000014596	msi2a	98	84.049	ENSAMEG00000002697	MSI2	99	85.047	Ailuropoda_melanoleuca
ENSNBRG00000014596	msi2a	100	94.898	ENSACIG00000009475	msi2a	100	94.898	Amphilophus_citrinellus
ENSNBRG00000014596	msi2a	90	82.000	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSNBRG00000014596	msi2a	100	99.361	ENSAPEG00000007706	msi2a	100	99.361	Amphiprion_percula
ENSNBRG00000014596	msi2a	100	99.361	ENSATEG00000010498	msi2a	100	99.588	Anabas_testudineus
ENSNBRG00000014596	msi2a	93	92.446	ENSATEG00000003301	-	100	92.446	Anabas_testudineus
ENSNBRG00000014596	msi2a	89	92.935	ENSACAG00000005452	MSI2	88	81.356	Anolis_carolinensis
ENSNBRG00000014596	msi2a	100	87.805	ENSANAG00000037827	MSI2	100	87.805	Aotus_nancymaae
ENSNBRG00000014596	msi2a	100	100.000	ENSACLG00000007752	msi2a	100	100.000	Astatotilapia_calliptera
ENSNBRG00000014596	msi2a	100	93.573	ENSAMXG00000032796	msi2a	100	93.830	Astyanax_mexicanus
ENSNBRG00000014596	msi2a	100	93.930	ENSAMXG00000010474	msi2b	100	93.930	Astyanax_mexicanus
ENSNBRG00000014596	msi2a	98	88.636	ENSBTAG00000004406	MSI2	95	88.636	Bos_taurus
ENSNBRG00000014596	msi2a	90	71.852	WBGene00003423	msi-1	74	71.852	Caenorhabditis_elegans
ENSNBRG00000014596	msi2a	100	87.805	ENSCJAG00000013998	MSI2	100	87.805	Callithrix_jacchus
ENSNBRG00000014596	msi2a	93	87.379	ENSCAFG00020025620	MSI2	81	85.580	Canis_lupus_dingo
ENSNBRG00000014596	msi2a	100	86.890	ENSCHIG00000016580	MSI2	100	86.890	Capra_hircus
ENSNBRG00000014596	msi2a	93	87.943	ENSCPOG00000034042	MSI2	99	87.943	Cavia_porcellus
ENSNBRG00000014596	msi2a	100	87.805	ENSCCAG00000033927	MSI2	100	87.805	Cebus_capucinus
ENSNBRG00000014596	msi2a	93	92.000	ENSCATG00000040879	MSI2	100	87.500	Cercocebus_atys
ENSNBRG00000014596	msi2a	92	94.079	ENSCLAG00000014325	MSI2	100	83.237	Chinchilla_lanigera
ENSNBRG00000014596	msi2a	100	87.805	ENSCSAG00000005633	MSI2	100	87.805	Chlorocebus_sabaeus
ENSNBRG00000014596	msi2a	89	65.468	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSNBRG00000014596	msi2a	93	94.089	ENSCPBG00000009942	MSI2	95	85.768	Chrysemys_picta_bellii
ENSNBRG00000014596	msi2a	79	83.333	ENSCING00000018579	-	90	53.110	Ciona_intestinalis
ENSNBRG00000014596	msi2a	81	68.531	ENSCSAVG00000010397	-	67	68.900	Ciona_savignyi
ENSNBRG00000014596	msi2a	93	92.000	ENSCANG00000036414	MSI2	100	85.047	Colobus_angolensis_palliatus
ENSNBRG00000014596	msi2a	100	87.234	ENSCGRG00001013330	Msi2	100	87.234	Cricetulus_griseus_chok1gshd
ENSNBRG00000014596	msi2a	98	83.792	ENSCGRG00000003141	Msi2	97	84.783	Cricetulus_griseus_crigri
ENSNBRG00000014596	msi2a	92	90.441	ENSCSEG00000003266	-	100	80.556	Cynoglossus_semilaevis
ENSNBRG00000014596	msi2a	81	80.412	ENSCSEG00000013557	msi2a	83	79.381	Cynoglossus_semilaevis
ENSNBRG00000014596	msi2a	92	97.059	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSNBRG00000014596	msi2a	100	99.227	ENSCVAG00000017075	msi2a	100	99.588	Cyprinodon_variegatus
ENSNBRG00000014596	msi2a	100	91.176	ENSDARG00000033901	msi2a	100	89.948	Danio_rerio
ENSNBRG00000014596	msi2a	92	97.368	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSNBRG00000014596	msi2a	93	92.708	ENSDNOG00000014501	MSI2	100	92.708	Dasypus_novemcinctus
ENSNBRG00000014596	msi2a	78	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSNBRG00000014596	msi2a	81	81.218	ENSDORG00000005394	Msi2	84	81.218	Dipodomys_ordii
ENSNBRG00000014596	msi2a	79	83.333	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSNBRG00000014596	msi2a	78	96.667	ENSETEG00000012450	-	64	71.711	Echinops_telfairi
ENSNBRG00000014596	msi2a	93	63.898	ENSEBUG00000006732	msi2a	87	63.898	Eptatretus_burgeri
ENSNBRG00000014596	msi2a	93	89.967	ENSEASG00005002965	MSI2	97	78.933	Equus_asinus_asinus
ENSNBRG00000014596	msi2a	92	94.079	ENSECAG00000011435	MSI2	100	81.073	Equus_caballus
ENSNBRG00000014596	msi2a	86	77.381	ENSEEUG00000007810	MSI2	100	77.075	Erinaceus_europaeus
ENSNBRG00000014596	msi2a	100	94.888	ENSELUG00000011747	msi2a	100	94.888	Esox_lucius
ENSNBRG00000014596	msi2a	100	91.646	ENSELUG00000001361	msi2b	100	91.646	Esox_lucius
ENSNBRG00000014596	msi2a	92	76.974	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSNBRG00000014596	msi2a	100	87.805	ENSFCAG00000041686	MSI2	100	87.805	Felis_catus
ENSNBRG00000014596	msi2a	97	85.047	ENSFDAG00000016118	MSI2	100	85.047	Fukomys_damarensis
ENSNBRG00000014596	msi2a	100	99.361	ENSFHEG00000000084	msi2a	100	99.361	Fundulus_heteroclitus
ENSNBRG00000014596	msi2a	88	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSNBRG00000014596	msi2a	92	92.763	ENSGALG00000005567	MSI2	100	82.370	Gallus_gallus
ENSNBRG00000014596	msi2a	92	100.000	ENSGAFG00000006974	msi2a	90	100.000	Gambusia_affinis
ENSNBRG00000014596	msi2a	100	87.170	ENSGAGG00000016542	MSI2	100	84.539	Gopherus_agassizii
ENSNBRG00000014596	msi2a	93	92.000	ENSGGOG00000013182	MSI2	100	85.047	Gorilla_gorilla
ENSNBRG00000014596	msi2a	100	100.000	ENSHBUG00000020800	msi2a	100	100.000	Haplochromis_burtoni
ENSNBRG00000014596	msi2a	88	92.308	ENSHGLG00000012444	MSI2	100	74.277	Heterocephalus_glaber_female
ENSNBRG00000014596	msi2a	78	83.575	ENSHGLG00100003744	MSI2	100	83.575	Heterocephalus_glaber_male
ENSNBRG00000014596	msi2a	78	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSNBRG00000014596	msi2a	100	93.612	ENSHCOG00000000266	msi2a	100	93.612	Hippocampus_comes
ENSNBRG00000014596	msi2a	95	82.031	ENSHCOG00000017241	-	98	70.075	Hippocampus_comes
ENSNBRG00000014596	msi2a	100	92.268	ENSIPUG00000003732	msi2b	100	92.268	Ictalurus_punctatus
ENSNBRG00000014596	msi2a	100	92.013	ENSIPUG00000021097	msi2a	100	94.650	Ictalurus_punctatus
ENSNBRG00000014596	msi2a	93	87.943	ENSSTOG00000007884	MSI2	99	87.943	Ictidomys_tridecemlineatus
ENSNBRG00000014596	msi2a	78	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSNBRG00000014596	msi2a	78	78.392	ENSJJAG00000006292	-	100	77.889	Jaculus_jaculus
ENSNBRG00000014596	msi2a	100	98.969	ENSKMAG00000009494	msi2a	100	98.969	Kryptolebias_marmoratus
ENSNBRG00000014596	msi2a	100	99.361	ENSLBEG00000007061	msi2a	100	99.361	Labrus_bergylta
ENSNBRG00000014596	msi2a	95	77.843	ENSLBEG00000026223	-	100	77.843	Labrus_bergylta
ENSNBRG00000014596	msi2a	80	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSNBRG00000014596	msi2a	100	94.072	ENSLOCG00000004675	msi2b	100	94.072	Lepisosteus_oculatus
ENSNBRG00000014596	msi2a	93	92.000	ENSMFAG00000003775	MSI2	100	85.047	Macaca_fascicularis
ENSNBRG00000014596	msi2a	93	92.000	ENSMMUG00000002069	MSI2	100	85.047	Macaca_mulatta
ENSNBRG00000014596	msi2a	100	87.805	ENSMNEG00000045275	MSI2	100	87.805	Macaca_nemestrina
ENSNBRG00000014596	msi2a	93	92.000	ENSMLEG00000033888	MSI2	100	85.047	Mandrillus_leucophaeus
ENSNBRG00000014596	msi2a	100	99.045	ENSMAMG00000010503	msi2a	100	99.588	Mastacembelus_armatus
ENSNBRG00000014596	msi2a	100	89.457	ENSMAMG00000002488	-	100	93.464	Mastacembelus_armatus
ENSNBRG00000014596	msi2a	100	100.000	ENSMZEG00005007676	msi2a	100	100.000	Maylandia_zebra
ENSNBRG00000014596	msi2a	92	93.421	ENSMAUG00000003862	Msi2	100	82.709	Mesocricetus_auratus
ENSNBRG00000014596	msi2a	100	87.805	ENSMICG00000013598	-	100	87.805	Microcebus_murinus
ENSNBRG00000014596	msi2a	92	84.211	ENSMICG00000032913	-	100	69.970	Microcebus_murinus
ENSNBRG00000014596	msi2a	92	93.421	ENSMOCG00000005820	Msi2	100	82.948	Microtus_ochrogaster
ENSNBRG00000014596	msi2a	92	90.132	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSNBRG00000014596	msi2a	78	83.092	ENSMODG00000014790	MSI2	100	83.092	Monodelphis_domestica
ENSNBRG00000014596	msi2a	100	99.346	ENSMALG00000000071	msi2a	100	99.588	Monopterus_albus
ENSNBRG00000014596	msi2a	100	87.500	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSNBRG00000014596	msi2a	100	87.500	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSNBRG00000014596	msi2a	100	87.500	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSNBRG00000014596	msi2a	100	87.500	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSNBRG00000014596	msi2a	98	88.961	ENSMPUG00000015377	MSI2	95	88.961	Mustela_putorius_furo
ENSNBRG00000014596	msi2a	98	88.961	ENSMLUG00000007865	MSI2	95	88.961	Myotis_lucifugus
ENSNBRG00000014596	msi2a	92	93.421	ENSNGAG00000017807	Msi2	100	82.948	Nannospalax_galili
ENSNBRG00000014596	msi2a	93	92.000	ENSNLEG00000008059	MSI2	95	92.823	Nomascus_leucogenys
ENSNBRG00000014596	msi2a	78	98.387	ENSOPRG00000000872	-	64	82.895	Ochotona_princeps
ENSNBRG00000014596	msi2a	92	94.079	ENSODEG00000011974	MSI2	100	83.237	Octodon_degus
ENSNBRG00000014596	msi2a	95	96.835	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSNBRG00000014596	msi2a	91	90.868	ENSOANG00000005667	MSI2	99	75.887	Ornithorhynchus_anatinus
ENSNBRG00000014596	msi2a	98	88.961	ENSOCUG00000010440	MSI2	94	90.099	Oryctolagus_cuniculus
ENSNBRG00000014596	msi2a	100	99.742	ENSORLG00000009671	msi2a	100	99.742	Oryzias_latipes
ENSNBRG00000014596	msi2a	100	97.125	ENSORLG00020021556	msi2a	100	99.588	Oryzias_latipes_hni
ENSNBRG00000014596	msi2a	100	99.742	ENSORLG00015004592	msi2a	100	99.742	Oryzias_latipes_hsok
ENSNBRG00000014596	msi2a	100	99.742	ENSOMEG00000000146	msi2a	100	99.742	Oryzias_melastigma
ENSNBRG00000014596	msi2a	98	85.390	ENSOGAG00000005621	MSI2	100	85.390	Otolemur_garnettii
ENSNBRG00000014596	msi2a	97	85.047	ENSPPAG00000037697	MSI2	100	85.047	Pan_paniscus
ENSNBRG00000014596	msi2a	97	90.099	ENSPPRG00000001848	MSI2	91	93.274	Panthera_pardus
ENSNBRG00000014596	msi2a	93	87.419	ENSPTIG00000021678	MSI2	96	87.419	Panthera_tigris_altaica
ENSNBRG00000014596	msi2a	87	71.724	ENSPTIG00000021873	-	90	75.105	Panthera_tigris_altaica
ENSNBRG00000014596	msi2a	93	92.000	ENSPTRG00000009437	MSI2	100	85.047	Pan_troglodytes
ENSNBRG00000014596	msi2a	100	87.805	ENSPANG00000022319	MSI2	100	87.805	Papio_anubis
ENSNBRG00000014596	msi2a	80	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSNBRG00000014596	msi2a	92	93.421	ENSPKIG00000007038	-	96	92.593	Paramormyrops_kingsleyae
ENSNBRG00000014596	msi2a	100	89.015	ENSPSIG00000008618	MSI2	100	86.207	Pelodiscus_sinensis
ENSNBRG00000014596	msi2a	100	98.722	ENSPMGG00000005888	msi2a	100	98.722	Periophthalmus_magnuspinnatus
ENSNBRG00000014596	msi2a	78	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSNBRG00000014596	msi2a	92	96.053	ENSPCIG00000006063	MSI2	100	81.638	Phascolarctos_cinereus
ENSNBRG00000014596	msi2a	89	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSNBRG00000014596	msi2a	92	96.479	ENSPLAG00000000436	msi2a	76	96.479	Poecilia_latipinna
ENSNBRG00000014596	msi2a	82	88.971	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSNBRG00000014596	msi2a	99	96.805	ENSPREG00000000881	msi2a	99	96.805	Poecilia_reticulata
ENSNBRG00000014596	msi2a	93	89.496	ENSPPYG00000008244	-	100	89.496	Pongo_abelii
ENSNBRG00000014596	msi2a	90	63.866	ENSPCAG00000010552	MSI2	100	63.866	Procavia_capensis
ENSNBRG00000014596	msi2a	79	96.154	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSNBRG00000014596	msi2a	93	84.932	ENSPVAG00000017053	MSI2	99	84.932	Pteropus_vampyrus
ENSNBRG00000014596	msi2a	100	100.000	ENSPNYG00000018393	msi2a	100	100.000	Pundamilia_nyererei
ENSNBRG00000014596	msi2a	100	94.087	ENSPNAG00000014957	msi2a	100	94.087	Pygocentrus_nattereri
ENSNBRG00000014596	msi2a	100	93.631	ENSPNAG00000000844	msi2b	100	93.631	Pygocentrus_nattereri
ENSNBRG00000014596	msi2a	93	92.446	ENSRNOG00000025338	Msi2	100	92.446	Rattus_norvegicus
ENSNBRG00000014596	msi2a	55	73.626	ENSRBIG00000032064	-	84	88.158	Rhinopithecus_bieti
ENSNBRG00000014596	msi2a	79	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSNBRG00000014596	msi2a	93	92.411	ENSSBOG00000026425	MSI2	100	85.047	Saimiri_boliviensis_boliviensis
ENSNBRG00000014596	msi2a	97	85.047	ENSSHAG00000008672	MSI2	100	85.047	Sarcophilus_harrisii
ENSNBRG00000014596	msi2a	97	86.799	ENSSFOG00015021687	-	97	92.793	Scleropages_formosus
ENSNBRG00000014596	msi2a	95	83.058	ENSSFOG00015012168	msi2b	100	71.814	Scleropages_formosus
ENSNBRG00000014596	msi2a	100	99.681	ENSSMAG00000018484	msi2a	100	99.681	Scophthalmus_maximus
ENSNBRG00000014596	msi2a	92	94.040	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSNBRG00000014596	msi2a	100	99.361	ENSSDUG00000014507	msi2a	100	99.588	Seriola_dumerili
ENSNBRG00000014596	msi2a	55	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSNBRG00000014596	msi2a	100	99.361	ENSSLDG00000017172	msi2a	100	99.361	Seriola_lalandi_dorsalis
ENSNBRG00000014596	msi2a	93	94.156	ENSSPUG00000000913	-	94	94.156	Sphenodon_punctatus
ENSNBRG00000014596	msi2a	100	94.840	ENSSPAG00000017793	msi2a	96	99.588	Stegastes_partitus
ENSNBRG00000014596	msi2a	100	87.805	ENSSSCG00000038505	MSI2	100	87.805	Sus_scrofa
ENSNBRG00000014596	msi2a	78	83.575	ENSTGUG00000008452	MSI2	100	83.575	Taeniopygia_guttata
ENSNBRG00000014596	msi2a	92	100.000	ENSTRUG00000021248	msi2a	100	91.642	Takifugu_rubripes
ENSNBRG00000014596	msi2a	81	77.778	ENSTBEG00000001241	MSI2	73	77.273	Tupaia_belangeri
ENSNBRG00000014596	msi2a	79	98.387	ENSTTRG00000002189	MSI2	91	94.079	Tursiops_truncatus
ENSNBRG00000014596	msi2a	98	88.961	ENSUAMG00000000700	MSI2	91	93.274	Ursus_americanus
ENSNBRG00000014596	msi2a	79	95.098	ENSUMAG00000000505	MSI2	95	93.264	Ursus_maritimus
ENSNBRG00000014596	msi2a	78	95.690	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSNBRG00000014596	msi2a	92	95.652	ENSVVUG00000011783	MSI2	97	91.244	Vulpes_vulpes
ENSNBRG00000014596	msi2a	100	97.423	ENSXCOG00000006113	msi2a	100	97.423	Xiphophorus_couchianus
ENSNBRG00000014596	msi2a	96	99.333	ENSXMAG00000000608	msi2a	100	99.588	Xiphophorus_maculatus