EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000014709 (Gene tree)
Gene ID: 102785516
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3862 bases
Position: chrJH422342.1:37337-41198
Accession: 102785516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000019070	RRM_1	PF00076.22	1.1e-31	1	2
ENSNBRP00000019070	RRM_1	PF00076.22	1.1e-31	2	2
ENSNBRP00000019070	RRM_3	PF08777.11	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000019579	-	942	XM_006800171	ENSNBRP00000019070	313 (aa)	XP_006800234	-

Gene Model

Click here to download ENSNBRG00000014709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000014709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000014709	-	52	43.787	ENSNBRG00000019981	-	65	43.787
ENSNBRG00000014709	-	52	44.186	ENSNBRG00000008134	-	65	42.857
ENSNBRG00000014709	-	53	43.860	ENSNBRG00000003888	srsf9	73	41.711
ENSNBRG00000014709	-	57	86.339	ENSNBRG00000001846	-	92	66.364
ENSNBRG00000014709	-	71	36.752	ENSNBRG00000008041	srsf1b	65	37.870
ENSNBRG00000014709	-	56	60.989	ENSNBRG00000001285	srsf5b	62	62.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000014709	-	58	83.696	ENSG00000124193	SRSF6	56	89.474	Homo_sapiens
ENSNBRG00000014709	-	100	85.231	ENSACIG00000020091	-	95	91.339	Amphilophus_citrinellus
ENSNBRG00000014709	-	96	63.934	ENSACIG00000023658	-	56	84.358	Amphilophus_citrinellus
ENSNBRG00000014709	-	100	86.250	ENSAOCG00000004309	-	100	87.188	Amphiprion_ocellaris
ENSNBRG00000014709	-	57	87.027	ENSAPEG00000013086	-	53	84.865	Amphiprion_percula
ENSNBRG00000014709	-	100	77.044	ENSAPEG00000020746	-	65	94.022	Amphiprion_percula
ENSNBRG00000014709	-	57	96.067	ENSATEG00000007255	-	72	84.034	Anabas_testudineus
ENSNBRG00000014709	-	57	86.188	ENSACAG00000002061	SRSF6	52	82.873	Anolis_carolinensis
ENSNBRG00000014709	-	58	83.696	ENSANAG00000024080	SRSF6	56	89.474	Aotus_nancymaae
ENSNBRG00000014709	-	57	81.720	ENSAMXG00000042692	-	96	80.000	Astyanax_mexicanus
ENSNBRG00000014709	-	57	84.946	ENSAMXG00000003101	-	91	63.450	Astyanax_mexicanus
ENSNBRG00000014709	-	58	84.239	ENSBTAG00000008527	SRSF6	56	90.789	Bos_taurus
ENSNBRG00000014709	-	58	83.696	ENSCJAG00000048403	SRSF6	68	83.060	Callithrix_jacchus
ENSNBRG00000014709	-	58	84.239	ENSCAFG00000009289	SRSF6	56	90.789	Canis_familiaris
ENSNBRG00000014709	-	58	84.239	ENSCAFG00020013559	SRSF6	56	90.789	Canis_lupus_dingo
ENSNBRG00000014709	-	58	83.696	ENSCHIG00000009148	-	53	82.514	Capra_hircus
ENSNBRG00000014709	-	58	84.239	ENSCHIG00000015890	-	56	90.789	Capra_hircus
ENSNBRG00000014709	-	58	78.261	ENSCPOG00000011761	SRSF6	56	89.474	Cavia_porcellus
ENSNBRG00000014709	-	68	66.055	ENSCCAG00000018540	-	60	72.826	Cebus_capucinus
ENSNBRG00000014709	-	58	83.696	ENSCCAG00000026018	-	56	89.474	Cebus_capucinus
ENSNBRG00000014709	-	58	83.696	ENSCATG00000030794	SRSF6	56	89.474	Cercocebus_atys
ENSNBRG00000014709	-	58	83.696	ENSCLAG00000010247	SRSF6	56	89.474	Chinchilla_lanigera
ENSNBRG00000014709	-	58	83.696	ENSCSAG00000014022	SRSF6	53	82.514	Chlorocebus_sabaeus
ENSNBRG00000014709	-	58	83.422	ENSCPBG00000018200	SRSF6	54	82.258	Chrysemys_picta_bellii
ENSNBRG00000014709	-	58	82.609	ENSCANG00000037774	-	53	81.421	Colobus_angolensis_palliatus
ENSNBRG00000014709	-	58	83.696	ENSCGRG00001022339	Srsf6	56	89.474	Cricetulus_griseus_chok1gshd
ENSNBRG00000014709	-	57	82.888	ENSDARG00000016783	srsf6b	80	92.105	Danio_rerio
ENSNBRG00000014709	-	58	83.696	ENSDNOG00000008410	SRSF6	53	82.514	Dasypus_novemcinctus
ENSNBRG00000014709	-	58	83.696	ENSDORG00000028378	Srsf6	56	89.474	Dipodomys_ordii
ENSNBRG00000014709	-	58	84.239	ENSECAG00000023932	SRSF6	56	83.060	Equus_caballus
ENSNBRG00000014709	-	57	88.172	ENSELUG00000024182	SRSF6	90	82.114	Esox_lucius
ENSNBRG00000014709	-	94	69.205	ENSELUG00000013506	SRSF6	95	68.987	Esox_lucius
ENSNBRG00000014709	-	98	69.497	ENSFHEG00000023065	srsf6a	54	84.066	Fundulus_heteroclitus
ENSNBRG00000014709	-	56	74.857	ENSGMOG00000006105	srsf6a	62	73.143	Gadus_morhua
ENSNBRG00000014709	-	80	83.871	ENSGMOG00000014458	srsf6a	51	81.579	Gadus_morhua
ENSNBRG00000014709	-	57	82.353	ENSGALG00000000990	SRSF6	56	89.474	Gallus_gallus
ENSNBRG00000014709	-	58	84.530	ENSGACG00000006084	srsf6a	72	70.635	Gasterosteus_aculeatus
ENSNBRG00000014709	-	58	83.422	ENSGAGG00000003238	SRSF6	54	82.258	Gopherus_agassizii
ENSNBRG00000014709	-	58	83.696	ENSGGOG00000009808	SRSF6	56	89.474	Gorilla_gorilla
ENSNBRG00000014709	-	100	99.361	ENSHBUG00000006386	-	100	99.361	Haplochromis_burtoni
ENSNBRG00000014709	-	60	68.229	ENSHGLG00000007701	-	57	65.363	Heterocephalus_glaber_female
ENSNBRG00000014709	-	58	83.696	ENSHGLG00000007348	SRSF6	56	89.474	Heterocephalus_glaber_female
ENSNBRG00000014709	-	95	67.230	ENSHCOG00000002740	srsf6a	57	84.358	Hippocampus_comes
ENSNBRG00000014709	-	55	86.047	ENSIPUG00000016856	SRSF6	50	86.628	Ictalurus_punctatus
ENSNBRG00000014709	-	57	84.324	ENSIPUG00000004776	-	63	87.709	Ictalurus_punctatus
ENSNBRG00000014709	-	58	83.696	ENSSTOG00000010866	SRSF6	56	89.474	Ictidomys_tridecemlineatus
ENSNBRG00000014709	-	57	85.870	ENSLBEG00000007356	srsf6a	69	66.667	Labrus_bergylta
ENSNBRG00000014709	-	94	66.343	ENSLACG00000005466	SRSF6	54	84.699	Latimeria_chalumnae
ENSNBRG00000014709	-	58	83.696	ENSMFAG00000036925	SRSF6	56	89.474	Macaca_fascicularis
ENSNBRG00000014709	-	58	83.696	ENSMMUG00000006742	SRSF6	56	89.474	Macaca_mulatta
ENSNBRG00000014709	-	75	65.417	ENSMNEG00000038270	-	53	81.967	Macaca_nemestrina
ENSNBRG00000014709	-	58	83.152	ENSMNEG00000027392	-	56	88.158	Macaca_nemestrina
ENSNBRG00000014709	-	97	63.112	ENSMAMG00000017161	srsf6a	53	85.946	Mastacembelus_armatus
ENSNBRG00000014709	-	100	93.396	ENSMZEG00005008032	-	100	94.340	Maylandia_zebra
ENSNBRG00000014709	-	100	63.898	ENSMZEG00005020658	-	60	81.921	Maylandia_zebra
ENSNBRG00000014709	-	58	83.152	ENSMICG00000008537	SRSF6	56	89.474	Microcebus_murinus
ENSNBRG00000014709	-	58	83.243	ENSMODG00000003107	SRSF6	54	82.609	Monodelphis_domestica
ENSNBRG00000014709	-	58	83.696	MGP_CAROLIEiJ_G0024606	Srsf6	56	89.474	Mus_caroli
ENSNBRG00000014709	-	58	83.696	ENSMUSG00000016921	Srsf6	56	89.474	Mus_musculus
ENSNBRG00000014709	-	58	83.696	MGP_PahariEiJ_G0026050	Srsf6	56	89.474	Mus_pahari
ENSNBRG00000014709	-	58	83.696	MGP_SPRETEiJ_G0025528	Srsf6	56	89.474	Mus_spretus
ENSNBRG00000014709	-	58	84.239	ENSMPUG00000017692	SRSF6	64	83.060	Mustela_putorius_furo
ENSNBRG00000014709	-	58	58.454	ENSMLUG00000016618	SRSF6	80	49.329	Myotis_lucifugus
ENSNBRG00000014709	-	58	83.696	ENSNGAG00000017560	Srsf6	56	89.474	Nannospalax_galili
ENSNBRG00000014709	-	58	83.696	ENSNLEG00000006524	SRSF6	56	89.474	Nomascus_leucogenys
ENSNBRG00000014709	-	58	83.243	ENSMEUG00000014615	SRSF6	61	82.609	Notamacropus_eugenii
ENSNBRG00000014709	-	57	86.885	ENSONIG00000001925	-	52	85.946	Oreochromis_niloticus
ENSNBRG00000014709	-	100	90.588	ENSONIG00000020247	-	100	87.353	Oreochromis_niloticus
ENSNBRG00000014709	-	58	68.063	ENSOCUG00000009785	-	63	64.550	Oryctolagus_cuniculus
ENSNBRG00000014709	-	56	54.286	ENSOCUG00000023999	-	70	54.286	Oryctolagus_cuniculus
ENSNBRG00000014709	-	58	74.444	ENSOMEG00000006001	srsf6a	67	60.956	Oryzias_melastigma
ENSNBRG00000014709	-	58	83.152	ENSPPAG00000034327	-	53	81.967	Pan_paniscus
ENSNBRG00000014709	-	58	71.667	ENSPPAG00000043131	-	57	71.429	Pan_paniscus
ENSNBRG00000014709	-	58	71.667	ENSPTRG00000046274	-	57	71.429	Pan_troglodytes
ENSNBRG00000014709	-	58	83.696	ENSPTRG00000044686	-	56	89.474	Pan_troglodytes
ENSNBRG00000014709	-	58	83.696	ENSPANG00000035224	SRSF6	56	89.474	Papio_anubis
ENSNBRG00000014709	-	94	68.153	ENSPKIG00000018463	-	75	90.789	Paramormyrops_kingsleyae
ENSNBRG00000014709	-	82	75.362	ENSPKIG00000015703	-	83	68.468	Paramormyrops_kingsleyae
ENSNBRG00000014709	-	96	67.508	ENSPMGG00000014963	srsf6a	55	85.792	Periophthalmus_magnuspinnatus
ENSNBRG00000014709	-	58	83.243	ENSPCIG00000003820	SRSF6	56	89.474	Phascolarctos_cinereus
ENSNBRG00000014709	-	57	87.931	ENSPFOG00000006437	srsf6a	50	80.952	Poecilia_formosa
ENSNBRG00000014709	-	98	59.882	ENSPLAG00000009243	srsf6a	80	78.740	Poecilia_latipinna
ENSNBRG00000014709	-	57	83.696	ENSPMEG00000006042	SRSF6	53	83.696	Poecilia_mexicana
ENSNBRG00000014709	-	58	83.696	ENSPPYG00000011019	SRSF6	53	82.514	Pongo_abelii
ENSNBRG00000014709	-	58	84.239	ENSPCAG00000010954	SRSF6	55	83.060	Procavia_capensis
ENSNBRG00000014709	-	58	83.152	ENSPCOG00000026364	SRSF6	56	89.474	Propithecus_coquereli
ENSNBRG00000014709	-	58	83.696	ENSPVAG00000015232	SRSF6	53	82.967	Pteropus_vampyrus
ENSNBRG00000014709	-	57	86.339	ENSPNYG00000011272	-	91	68.373	Pundamilia_nyererei
ENSNBRG00000014709	-	100	99.681	ENSPNYG00000004944	-	100	99.681	Pundamilia_nyererei
ENSNBRG00000014709	-	58	84.444	ENSRBIG00000041414	SRSF6	58	89.474	Rhinopithecus_bieti
ENSNBRG00000014709	-	58	83.696	ENSRROG00000029989	SRSF6	56	89.474	Rhinopithecus_roxellana
ENSNBRG00000014709	-	58	83.696	ENSSBOG00000033708	-	56	89.474	Saimiri_boliviensis_boliviensis
ENSNBRG00000014709	-	57	70.950	ENSSBOG00000034078	-	54	64.894	Saimiri_boliviensis_boliviensis
ENSNBRG00000014709	-	58	83.243	ENSSHAG00000012805	SRSF6	54	82.609	Sarcophilus_harrisii
ENSNBRG00000014709	-	57	83.420	ENSSFOG00015019681	-	81	65.203	Scleropages_formosus
ENSNBRG00000014709	-	57	86.667	ENSSFOG00015015169	SRSF6	59	85.165	Scleropages_formosus
ENSNBRG00000014709	-	96	76.415	ENSSMAG00000017447	-	72	78.903	Scophthalmus_maximus
ENSNBRG00000014709	-	57	86.486	ENSSDUG00000016097	srsf6a	100	63.897	Seriola_dumerili
ENSNBRG00000014709	-	98	59.877	ENSSLDG00000022841	srsf6a	53	85.946	Seriola_lalandi_dorsalis
ENSNBRG00000014709	-	57	87.293	ENSSPUG00000004967	SRSF6	56	89.474	Sphenodon_punctatus
ENSNBRG00000014709	-	57	86.486	ENSSPAG00000002362	srsf6a	96	62.810	Stegastes_partitus
ENSNBRG00000014709	-	58	84.239	ENSSSCG00000007362	SRSF6	61	83.060	Sus_scrofa
ENSNBRG00000014709	-	97	68.810	ENSTNIG00000001692	srsf6a	56	84.865	Tetraodon_nigroviridis
ENSNBRG00000014709	-	58	84.239	ENSUAMG00000003559	SRSF6	56	90.789	Ursus_americanus
ENSNBRG00000014709	-	57	85.635	ENSXMAG00000021849	srsf6a	55	85.635	Xiphophorus_maculatus