EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015057 (Gene tree)
Gene ID: 102781197
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1905 bases
Position: chrJH422352.1:1281693-1283597
Accession: 102781197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000019533	RRM_1	PF00076.22	2e-32	1	3
ENSNBRP00000019533	RRM_1	PF00076.22	2e-32	2	3
ENSNBRP00000019533	RRM_1	PF00076.22	2e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000020048	-	1905	XM_006801361	ENSNBRP00000019533	634 (aa)	XP_006801424	UPI0003EC3EF6

Gene Model

Click here to download ENSNBRG00000015057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015057	rbm12b	74	43.750	ENSNBRG00000013644	zgc:153215	81	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015057	rbm12b	92	46.753	ENSG00000183808	RBM12B	99	75.309	Homo_sapiens
ENSNBRG00000015057	rbm12b	100	69.182	ENSAPOG00000013963	rbm12b	100	69.182	Acanthochromis_polyacanthus
ENSNBRG00000015057	rbm12b	72	30.042	ENSAPOG00000008836	zgc:153215	95	30.042	Acanthochromis_polyacanthus
ENSNBRG00000015057	rbm12b	86	45.455	ENSAMEG00000007134	RBM12B	66	45.455	Ailuropoda_melanoleuca
ENSNBRG00000015057	rbm12b	88	78.826	ENSACIG00000014943	rbm12b	98	83.557	Amphilophus_citrinellus
ENSNBRG00000015057	rbm12b	100	71.384	ENSAOCG00000024270	rbm12b	100	71.384	Amphiprion_ocellaris
ENSNBRG00000015057	rbm12b	99	46.926	ENSAPEG00000022079	rbm12b	100	72.078	Amphiprion_percula
ENSNBRG00000015057	rbm12b	74	50.617	ENSATEG00000001886	zgc:153215	77	48.864	Anabas_testudineus
ENSNBRG00000015057	rbm12b	100	67.296	ENSATEG00000004578	rbm12b	97	67.296	Anabas_testudineus
ENSNBRG00000015057	rbm12b	100	38.182	ENSAPLG00000002020	RBM12B	100	39.628	Anas_platyrhynchos
ENSNBRG00000015057	rbm12b	90	44.444	ENSACAG00000003463	RBM12B	59	44.444	Anolis_carolinensis
ENSNBRG00000015057	rbm12b	90	46.753	ENSANAG00000034015	RBM12B	70	46.753	Aotus_nancymaae
ENSNBRG00000015057	rbm12b	100	80.412	ENSACLG00000005578	rbm12b	100	80.412	Astatotilapia_calliptera
ENSNBRG00000015057	rbm12b	100	98.423	ENSACLG00000005575	rbm12b	98	98.423	Astatotilapia_calliptera
ENSNBRG00000015057	rbm12b	100	46.719	ENSAMXG00000041973	rbm12b	100	46.967	Astyanax_mexicanus
ENSNBRG00000015057	rbm12b	66	57.143	ENSAMXG00000020853	zgc:153215	73	47.321	Astyanax_mexicanus
ENSNBRG00000015057	rbm12b	86	46.753	ENSBTAG00000013408	RBM12B	65	46.753	Bos_taurus
ENSNBRG00000015057	rbm12b	86	45.455	ENSCAFG00000009109	RBM12B	57	45.455	Canis_familiaris
ENSNBRG00000015057	rbm12b	91	45.455	ENSCAFG00020012203	RBM12B	68	45.455	Canis_lupus_dingo
ENSNBRG00000015057	rbm12b	74	40.612	ENSCHIG00000006790	RBM12B	67	40.612	Capra_hircus
ENSNBRG00000015057	rbm12b	92	46.753	ENSTSYG00000012515	RBM12B	61	46.753	Carlito_syrichta
ENSNBRG00000015057	rbm12b	90	48.052	ENSCAPG00000003543	RBM12B	62	48.052	Cavia_aperea
ENSNBRG00000015057	rbm12b	90	48.052	ENSCPOG00000007815	RBM12B	62	48.052	Cavia_porcellus
ENSNBRG00000015057	rbm12b	92	46.753	ENSCATG00000030769	RBM12B	70	46.753	Cercocebus_atys
ENSNBRG00000015057	rbm12b	90	48.052	ENSCLAG00000017617	RBM12B	62	48.052	Chinchilla_lanigera
ENSNBRG00000015057	rbm12b	92	46.753	ENSCSAG00000018559	RBM12B	60	46.753	Chlorocebus_sabaeus
ENSNBRG00000015057	rbm12b	84	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSNBRG00000015057	rbm12b	100	38.582	ENSCPBG00000003061	RBM12B	100	38.582	Chrysemys_picta_bellii
ENSNBRG00000015057	rbm12b	92	46.753	ENSCANG00000030379	RBM12B	69	46.753	Colobus_angolensis_palliatus
ENSNBRG00000015057	rbm12b	86	48.052	ENSCGRG00001008710	-	65	48.052	Cricetulus_griseus_chok1gshd
ENSNBRG00000015057	rbm12b	50	30.931	ENSCSEG00000001575	-	91	30.931	Cynoglossus_semilaevis
ENSNBRG00000015057	rbm12b	100	60.606	ENSCSEG00000004610	rbm12b	97	60.606	Cynoglossus_semilaevis
ENSNBRG00000015057	rbm12b	74	36.406	ENSCVAG00000009259	-	99	36.406	Cyprinodon_variegatus
ENSNBRG00000015057	rbm12b	100	59.624	ENSCVAG00000011047	rbm12b	100	59.624	Cyprinodon_variegatus
ENSNBRG00000015057	rbm12b	100	42.335	ENSDARG00000079717	rbm12b	100	43.338	Danio_rerio
ENSNBRG00000015057	rbm12b	65	56.977	ENSDARG00000055889	zgc:153215	79	56.977	Danio_rerio
ENSNBRG00000015057	rbm12b	86	46.753	ENSDNOG00000041608	RBM12B	56	46.753	Dasypus_novemcinctus
ENSNBRG00000015057	rbm12b	91	48.052	ENSDORG00000024034	-	63	48.052	Dipodomys_ordii
ENSNBRG00000015057	rbm12b	78	39.922	ENSETEG00000013005	-	69	39.922	Echinops_telfairi
ENSNBRG00000015057	rbm12b	69	30.045	ENSEBUG00000009015	-	71	30.045	Eptatretus_burgeri
ENSNBRG00000015057	rbm12b	86	46.753	ENSEASG00005016297	RBM12B	64	46.753	Equus_asinus_asinus
ENSNBRG00000015057	rbm12b	86	46.753	ENSECAG00000017870	RBM12B	58	46.753	Equus_caballus
ENSNBRG00000015057	rbm12b	86	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSNBRG00000015057	rbm12b	100	37.465	ENSFALG00000014893	RBM12B	100	38.122	Ficedula_albicollis
ENSNBRG00000015057	rbm12b	90	48.052	ENSFDAG00000005576	RBM12B	60	48.052	Fukomys_damarensis
ENSNBRG00000015057	rbm12b	72	30.131	ENSFHEG00000014539	zgc:153215	95	30.131	Fundulus_heteroclitus
ENSNBRG00000015057	rbm12b	100	60.436	ENSFHEG00000016425	rbm12b	100	60.436	Fundulus_heteroclitus
ENSNBRG00000015057	rbm12b	99	56.063	ENSGMOG00000013467	rbm12b	100	56.063	Gadus_morhua
ENSNBRG00000015057	rbm12b	100	39.205	ENSGALG00000035129	RBM12B	100	39.205	Gallus_gallus
ENSNBRG00000015057	rbm12b	100	65.620	ENSGAFG00000007224	rbm12b	100	65.620	Gambusia_affinis
ENSNBRG00000015057	rbm12b	100	63.707	ENSGACG00000008682	rbm12b	100	63.707	Gasterosteus_aculeatus
ENSNBRG00000015057	rbm12b	100	38.865	ENSGAGG00000009774	RBM12B	100	38.865	Gopherus_agassizii
ENSNBRG00000015057	rbm12b	92	46.753	ENSGGOG00000011909	RBM12B	68	46.753	Gorilla_gorilla
ENSNBRG00000015057	rbm12b	100	94.190	ENSHBUG00000016227	rbm12b	100	94.190	Haplochromis_burtoni
ENSNBRG00000015057	rbm12b	74	46.591	ENSHBUG00000016150	zgc:153215	80	46.591	Haplochromis_burtoni
ENSNBRG00000015057	rbm12b	90	48.052	ENSHGLG00000009063	RBM12B	61	48.052	Heterocephalus_glaber_female
ENSNBRG00000015057	rbm12b	90	48.052	ENSHGLG00100021324	RBM12B	61	48.052	Heterocephalus_glaber_male
ENSNBRG00000015057	rbm12b	100	55.486	ENSHCOG00000014952	rbm12b	100	55.486	Hippocampus_comes
ENSNBRG00000015057	rbm12b	100	45.372	ENSIPUG00000001167	RBM12B	97	45.372	Ictalurus_punctatus
ENSNBRG00000015057	rbm12b	92	48.052	ENSSTOG00000027445	RBM12B	72	48.052	Ictidomys_tridecemlineatus
ENSNBRG00000015057	rbm12b	86	46.753	ENSJJAG00000004165	-	65	46.753	Jaculus_jaculus
ENSNBRG00000015057	rbm12b	100	61.792	ENSKMAG00000013715	rbm12b	100	61.792	Kryptolebias_marmoratus
ENSNBRG00000015057	rbm12b	100	62.107	ENSKMAG00000013704	rbm12b	97	62.107	Kryptolebias_marmoratus
ENSNBRG00000015057	rbm12b	74	30.952	ENSLBEG00000002597	zgc:153215	99	30.952	Labrus_bergylta
ENSNBRG00000015057	rbm12b	100	39.545	ENSLACG00000007177	RBM12B	100	39.574	Latimeria_chalumnae
ENSNBRG00000015057	rbm12b	100	47.407	ENSLOCG00000018344	rbm12b	100	47.556	Lepisosteus_oculatus
ENSNBRG00000015057	rbm12b	87	43.750	ENSLAFG00000029949	RBM12B	67	43.750	Loxodonta_africana
ENSNBRG00000015057	rbm12b	92	46.753	ENSMFAG00000045430	RBM12B	69	46.753	Macaca_fascicularis
ENSNBRG00000015057	rbm12b	92	46.753	ENSMMUG00000005558	RBM12B	68	46.753	Macaca_mulatta
ENSNBRG00000015057	rbm12b	92	46.753	ENSMNEG00000041292	RBM12B	69	46.753	Macaca_nemestrina
ENSNBRG00000015057	rbm12b	92	46.753	ENSMLEG00000037288	RBM12B	68	46.753	Mandrillus_leucophaeus
ENSNBRG00000015057	rbm12b	100	68.643	ENSMAMG00000011998	rbm12b	100	69.159	Mastacembelus_armatus
ENSNBRG00000015057	rbm12b	100	92.902	ENSMZEG00005014845	rbm12b	99	92.710	Maylandia_zebra
ENSNBRG00000015057	rbm12b	100	98.107	ENSMZEG00005015005	rbm12b	100	98.107	Maylandia_zebra
ENSNBRG00000015057	rbm12b	74	46.591	ENSMZEG00005005435	zgc:153215	80	46.591	Maylandia_zebra
ENSNBRG00000015057	rbm12b	74	42.500	ENSMGAG00000011985	RBM12B	99	42.500	Meleagris_gallopavo
ENSNBRG00000015057	rbm12b	90	48.052	ENSMAUG00000021752	-	70	48.052	Mesocricetus_auratus
ENSNBRG00000015057	rbm12b	92	46.753	ENSMICG00000036969	RBM12B	71	46.753	Microcebus_murinus
ENSNBRG00000015057	rbm12b	86	46.753	ENSMOCG00000005603	-	68	46.753	Microtus_ochrogaster
ENSNBRG00000015057	rbm12b	99	63.191	ENSMMOG00000002404	rbm12b	94	63.191	Mola_mola
ENSNBRG00000015057	rbm12b	86	44.156	ENSMODG00000007436	RBM12B	76	44.156	Monodelphis_domestica
ENSNBRG00000015057	rbm12b	100	65.781	ENSMALG00000012059	rbm12b	100	65.781	Monopterus_albus
ENSNBRG00000015057	rbm12b	73	31.185	ENSMALG00000001222	zgc:153215	98	31.185	Monopterus_albus
ENSNBRG00000015057	rbm12b	86	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSNBRG00000015057	rbm12b	86	50.667	ENSMUSG00000046667	Rbm12b1	67	50.667	Mus_musculus
ENSNBRG00000015057	rbm12b	95	40.204	MGP_SPRETEiJ_G0026766	-	73	40.204	Mus_spretus
ENSNBRG00000015057	rbm12b	95	39.600	MGP_SPRETEiJ_G0026765	-	67	39.600	Mus_spretus
ENSNBRG00000015057	rbm12b	86	46.753	ENSMPUG00000018637	RBM12B	56	46.753	Mustela_putorius_furo
ENSNBRG00000015057	rbm12b	86	44.156	ENSMLUG00000002359	RBM12B	59	44.156	Myotis_lucifugus
ENSNBRG00000015057	rbm12b	91	45.455	ENSNGAG00000002801	-	64	45.455	Nannospalax_galili
ENSNBRG00000015057	rbm12b	92	46.753	ENSNLEG00000032050	RBM12B	68	46.753	Nomascus_leucogenys
ENSNBRG00000015057	rbm12b	90	48.052	ENSODEG00000019204	RBM12B	62	48.052	Octodon_degus
ENSNBRG00000015057	rbm12b	100	97.003	ENSONIG00000020612	rbm12b	100	97.003	Oreochromis_niloticus
ENSNBRG00000015057	rbm12b	100	37.518	ENSOANG00000015735	-	97	38.528	Ornithorhynchus_anatinus
ENSNBRG00000015057	rbm12b	86	46.753	ENSOCUG00000010353	RBM12B	65	46.753	Oryctolagus_cuniculus
ENSNBRG00000015057	rbm12b	100	63.693	ENSORLG00000008228	rbm12b	97	63.693	Oryzias_latipes
ENSNBRG00000015057	rbm12b	100	64.006	ENSORLG00020013619	rbm12b	97	64.006	Oryzias_latipes_hni
ENSNBRG00000015057	rbm12b	100	63.850	ENSORLG00015019999	rbm12b	97	63.850	Oryzias_latipes_hsok
ENSNBRG00000015057	rbm12b	100	64.476	ENSOMEG00000022523	rbm12b	97	64.476	Oryzias_melastigma
ENSNBRG00000015057	rbm12b	92	46.753	ENSOGAG00000002979	RBM12B	61	46.753	Otolemur_garnettii
ENSNBRG00000015057	rbm12b	86	46.753	ENSPTIG00000020071	RBM12B	65	46.753	Panthera_tigris_altaica
ENSNBRG00000015057	rbm12b	92	46.753	ENSPTRG00000020420	RBM12B	68	46.753	Pan_troglodytes
ENSNBRG00000015057	rbm12b	92	46.753	ENSPANG00000035535	RBM12B	68	46.753	Papio_anubis
ENSNBRG00000015057	rbm12b	100	49.398	ENSPKIG00000018719	rbm12b	99	49.548	Paramormyrops_kingsleyae
ENSNBRG00000015057	rbm12b	73	33.659	ENSPKIG00000014851	zgc:153215	99	33.659	Paramormyrops_kingsleyae
ENSNBRG00000015057	rbm12b	100	38.494	ENSPSIG00000001348	RBM12B	100	38.494	Pelodiscus_sinensis
ENSNBRG00000015057	rbm12b	67	51.385	ENSPMGG00000012348	-	97	51.385	Periophthalmus_magnuspinnatus
ENSNBRG00000015057	rbm12b	86	48.052	ENSPEMG00000008279	-	67	48.052	Peromyscus_maniculatus_bairdii
ENSNBRG00000015057	rbm12b	86	44.156	ENSPCIG00000008556	RBM12B	78	44.156	Phascolarctos_cinereus
ENSNBRG00000015057	rbm12b	74	42.143	ENSPFOG00000017451	zgc:153215	77	42.143	Poecilia_formosa
ENSNBRG00000015057	rbm12b	100	64.780	ENSPFOG00000020937	rbm12b	97	64.780	Poecilia_formosa
ENSNBRG00000015057	rbm12b	100	65.306	ENSPLAG00000018782	rbm12b	100	65.306	Poecilia_latipinna
ENSNBRG00000015057	rbm12b	100	65.463	ENSPMEG00000011418	rbm12b	100	65.463	Poecilia_mexicana
ENSNBRG00000015057	rbm12b	100	64.992	ENSPREG00000020770	rbm12b	100	64.992	Poecilia_reticulata
ENSNBRG00000015057	rbm12b	86	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSNBRG00000015057	rbm12b	86	45.455	ENSPCOG00000023546	RBM12B	65	45.455	Propithecus_coquereli
ENSNBRG00000015057	rbm12b	86	46.753	ENSPVAG00000011803	RBM12B	61	46.753	Pteropus_vampyrus
ENSNBRG00000015057	rbm12b	100	98.580	ENSPNYG00000016696	rbm12b	100	98.580	Pundamilia_nyererei
ENSNBRG00000015057	rbm12b	67	52.041	ENSPNAG00000025628	zgc:153215	77	52.041	Pygocentrus_nattereri
ENSNBRG00000015057	rbm12b	100	45.536	ENSPNAG00000008126	rbm12b	97	46.875	Pygocentrus_nattereri
ENSNBRG00000015057	rbm12b	86	49.333	ENSRNOG00000016330	Rbm12b	67	49.333	Rattus_norvegicus
ENSNBRG00000015057	rbm12b	74	40.688	ENSRNOG00000055292	LOC679087	65	40.688	Rattus_norvegicus
ENSNBRG00000015057	rbm12b	92	46.753	ENSRBIG00000035046	RBM12B	68	46.753	Rhinopithecus_bieti
ENSNBRG00000015057	rbm12b	92	46.753	ENSRROG00000023660	RBM12B	71	46.753	Rhinopithecus_roxellana
ENSNBRG00000015057	rbm12b	92	46.753	ENSSBOG00000027592	RBM12B	68	46.753	Saimiri_boliviensis_boliviensis
ENSNBRG00000015057	rbm12b	86	44.156	ENSSHAG00000015335	RBM12B	78	44.156	Sarcophilus_harrisii
ENSNBRG00000015057	rbm12b	74	34.510	ENSSFOG00015009427	zgc:153215	99	34.510	Scleropages_formosus
ENSNBRG00000015057	rbm12b	100	48.744	ENSSFOG00015001584	rbm12b	100	48.744	Scleropages_formosus
ENSNBRG00000015057	rbm12b	74	31.138	ENSSMAG00000019013	zgc:153215	96	31.138	Scophthalmus_maximus
ENSNBRG00000015057	rbm12b	100	68.652	ENSSMAG00000019708	rbm12b	100	68.652	Scophthalmus_maximus
ENSNBRG00000015057	rbm12b	100	70.031	ENSSDUG00000006856	rbm12b	100	70.031	Seriola_dumerili
ENSNBRG00000015057	rbm12b	74	30.661	ENSSDUG00000012545	zgc:153215	98	30.661	Seriola_dumerili
ENSNBRG00000015057	rbm12b	100	70.336	ENSSLDG00000016156	rbm12b	100	70.336	Seriola_lalandi_dorsalis
ENSNBRG00000015057	rbm12b	74	53.086	ENSSLDG00000013581	zgc:153215	77	51.136	Seriola_lalandi_dorsalis
ENSNBRG00000015057	rbm12b	75	40.719	ENSSARG00000011845	-	67	40.719	Sorex_araneus
ENSNBRG00000015057	rbm12b	75	39.048	ENSSPUG00000016954	RBM12B	92	38.667	Sphenodon_punctatus
ENSNBRG00000015057	rbm12b	100	71.384	ENSSPAG00000006774	rbm12b	100	71.384	Stegastes_partitus
ENSNBRG00000015057	rbm12b	74	32.265	ENSSPAG00000023584	zgc:153215	98	32.051	Stegastes_partitus
ENSNBRG00000015057	rbm12b	86	45.333	ENSSSCG00000006110	RBM12B	57	45.333	Sus_scrofa
ENSNBRG00000015057	rbm12b	74	42.222	ENSTGUG00000011860	RBM12B	96	42.222	Taeniopygia_guttata
ENSNBRG00000015057	rbm12b	100	58.268	ENSTRUG00000013738	rbm12b	100	58.268	Takifugu_rubripes
ENSNBRG00000015057	rbm12b	55	30.491	ENSTNIG00000018374	-	98	30.513	Tetraodon_nigroviridis
ENSNBRG00000015057	rbm12b	78	38.566	ENSTBEG00000000449	RBM12B	66	38.566	Tupaia_belangeri
ENSNBRG00000015057	rbm12b	86	46.753	ENSUAMG00000023639	RBM12B	64	46.753	Ursus_americanus
ENSNBRG00000015057	rbm12b	86	46.753	ENSUMAG00000016008	RBM12B	61	46.753	Ursus_maritimus
ENSNBRG00000015057	rbm12b	91	45.455	ENSVVUG00000002694	RBM12B	68	45.455	Vulpes_vulpes
ENSNBRG00000015057	rbm12b	100	34.949	ENSXETG00000014694	rbm12b	100	38.254	Xenopus_tropicalis
ENSNBRG00000015057	rbm12b	82	33.208	ENSXETG00000014696	rbm12b	74	33.208	Xenopus_tropicalis
ENSNBRG00000015057	rbm12b	66	65.017	ENSXCOG00000019735	-	99	65.017	Xiphophorus_couchianus
ENSNBRG00000015057	rbm12b	62	38.636	ENSXMAG00000013169	-	96	38.636	Xiphophorus_maculatus
ENSNBRG00000015057	rbm12b	100	65.620	ENSXMAG00000014213	rbm12b	100	65.620	Xiphophorus_maculatus