EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000015060 (Gene tree)
Gene ID: 102776758
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC102776758
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3574 bases
Position: chrJH422284.1:4517099-4520672
Accession: 102776758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000019537	zf-CCCH	PF00642.24	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000020052	-	3481	XM_006787208	ENSNBRP00000019537	240 (aa)	XP_006787271	UPI0003EBF3D2

Gene Model

Click here to download ENSNBRG00000015060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015060	si:ch211-113e8.11	100	68.199	ENSAPOG00000010990	si:ch211-113e8.11	100	67.692	Acanthochromis_polyacanthus
ENSNBRG00000015060	si:ch211-113e8.11	81	72.081	ENSACIG00000011566	si:ch211-113e8.11	94	77.157	Amphilophus_citrinellus
ENSNBRG00000015060	si:ch211-113e8.11	100	67.442	ENSAOCG00000022156	si:ch211-113e8.11	100	66.279	Amphiprion_ocellaris
ENSNBRG00000015060	si:ch211-113e8.11	100	67.442	ENSAPEG00000018284	si:ch211-113e8.11	100	66.279	Amphiprion_percula
ENSNBRG00000015060	si:ch211-113e8.11	100	65.476	ENSATEG00000018391	si:ch211-113e8.11	100	64.683	Anabas_testudineus
ENSNBRG00000015060	si:ch211-113e8.11	100	98.333	ENSACLG00000017011	si:ch211-113e8.11	100	98.333	Astatotilapia_calliptera
ENSNBRG00000015060	si:ch211-113e8.11	97	49.810	ENSAMXG00000000733	si:ch211-113e8.11	97	51.145	Astyanax_mexicanus
ENSNBRG00000015060	si:ch211-113e8.11	99	62.109	ENSCSEG00000004538	si:ch211-113e8.11	99	59.533	Cynoglossus_semilaevis
ENSNBRG00000015060	si:ch211-113e8.11	100	59.600	ENSCVAG00000020156	si:ch211-113e8.11	99	59.761	Cyprinodon_variegatus
ENSNBRG00000015060	si:ch211-113e8.11	95	47.845	ENSDARG00000076585	si:ch211-113e8.11	97	50.000	Danio_rerio
ENSNBRG00000015060	si:ch211-113e8.11	53	32.593	FBgn0259728	CG42382	63	32.593	Drosophila_melanogaster
ENSNBRG00000015060	si:ch211-113e8.11	100	53.817	ENSELUG00000001130	si:ch211-113e8.11	100	51.711	Esox_lucius
ENSNBRG00000015060	si:ch211-113e8.11	100	59.583	ENSFHEG00000007870	si:ch211-113e8.11	99	58.333	Fundulus_heteroclitus
ENSNBRG00000015060	si:ch211-113e8.11	100	64.113	ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	Gambusia_affinis
ENSNBRG00000015060	si:ch211-113e8.11	100	97.083	ENSHBUG00000003552	si:ch211-113e8.11	100	97.083	Haplochromis_burtoni
ENSNBRG00000015060	si:ch211-113e8.11	99	56.432	ENSHCOG00000002041	si:ch211-113e8.11	99	55.417	Hippocampus_comes
ENSNBRG00000015060	si:ch211-113e8.11	95	50.000	ENSIPUG00000002260	si:ch211-113e8.11	93	50.413	Ictalurus_punctatus
ENSNBRG00000015060	si:ch211-113e8.11	100	63.200	ENSKMAG00000000086	si:ch211-113e8.11	99	63.200	Kryptolebias_marmoratus
ENSNBRG00000015060	si:ch211-113e8.11	100	55.224	ENSLBEG00000008353	si:ch211-113e8.11	100	53.933	Labrus_bergylta
ENSNBRG00000015060	si:ch211-113e8.11	73	42.373	ENSLACG00000004304	si:ch211-113e8.11	77	43.226	Latimeria_chalumnae
ENSNBRG00000015060	si:ch211-113e8.11	86	63.717	ENSMAMG00000019098	si:ch211-113e8.11	90	60.889	Mastacembelus_armatus
ENSNBRG00000015060	si:ch211-113e8.11	100	95.000	ENSMZEG00005023658	si:ch211-113e8.11	100	95.000	Maylandia_zebra
ENSNBRG00000015060	si:ch211-113e8.11	100	55.738	ENSMMOG00000007254	si:ch211-113e8.11	100	54.772	Mola_mola
ENSNBRG00000015060	si:ch211-113e8.11	100	62.835	ENSMALG00000005110	si:ch211-113e8.11	100	60.385	Monopterus_albus
ENSNBRG00000015060	si:ch211-113e8.11	100	60.241	ENSORLG00000023699	si:ch211-113e8.11	100	59.036	Oryzias_latipes
ENSNBRG00000015060	si:ch211-113e8.11	100	60.000	ENSORLG00020022094	si:ch211-113e8.11	100	57.600	Oryzias_latipes_hni
ENSNBRG00000015060	si:ch211-113e8.11	100	59.289	ENSORLG00015002588	si:ch211-113e8.11	100	58.103	Oryzias_latipes_hsok
ENSNBRG00000015060	si:ch211-113e8.11	100	60.400	ENSOMEG00000010624	si:ch211-113e8.11	100	58.943	Oryzias_melastigma
ENSNBRG00000015060	si:ch211-113e8.11	57	53.472	ENSPKIG00000023576	si:ch211-113e8.11	95	46.250	Paramormyrops_kingsleyae
ENSNBRG00000015060	si:ch211-113e8.11	96	54.348	ENSPMGG00000018547	si:ch211-113e8.11	97	54.783	Periophthalmus_magnuspinnatus
ENSNBRG00000015060	si:ch211-113e8.11	98	65.702	ENSPFOG00000007950	si:ch211-113e8.11	100	65.289	Poecilia_formosa
ENSNBRG00000015060	si:ch211-113e8.11	100	66.532	ENSPLAG00000002081	si:ch211-113e8.11	100	66.129	Poecilia_latipinna
ENSNBRG00000015060	si:ch211-113e8.11	100	66.129	ENSPMEG00000017505	si:ch211-113e8.11	100	65.726	Poecilia_mexicana
ENSNBRG00000015060	si:ch211-113e8.11	100	68.313	ENSPREG00000008530	si:ch211-113e8.11	100	68.313	Poecilia_reticulata
ENSNBRG00000015060	si:ch211-113e8.11	100	98.750	ENSPNYG00000022856	si:ch211-113e8.11	100	98.750	Pundamilia_nyererei
ENSNBRG00000015060	si:ch211-113e8.11	98	43.600	ENSPNAG00000013782	si:ch211-113e8.11	99	44.177	Pygocentrus_nattereri
ENSNBRG00000015060	si:ch211-113e8.11	97	49.583	ENSSFOG00015000959	si:ch211-113e8.11	97	47.755	Scleropages_formosus
ENSNBRG00000015060	si:ch211-113e8.11	100	67.068	ENSSMAG00000009732	si:ch211-113e8.11	100	65.462	Scophthalmus_maximus
ENSNBRG00000015060	si:ch211-113e8.11	100	69.412	ENSSDUG00000000112	si:ch211-113e8.11	100	68.627	Seriola_dumerili
ENSNBRG00000015060	si:ch211-113e8.11	100	70.196	ENSSLDG00000003287	si:ch211-113e8.11	100	69.804	Seriola_lalandi_dorsalis
ENSNBRG00000015060	si:ch211-113e8.11	100	68.872	ENSSPAG00000001375	si:ch211-113e8.11	100	68.482	Stegastes_partitus
ENSNBRG00000015060	si:ch211-113e8.11	99	56.504	ENSTRUG00000023898	si:ch211-113e8.11	99	54.878	Takifugu_rubripes
ENSNBRG00000015060	si:ch211-113e8.11	100	64.113	ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	Xiphophorus_maculatus