EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015099 (Gene tree)
Gene ID: 102785699
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element-binding protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 8798 bases
Position: chrJH422296.1:5125051-5133848
Accession: 102785699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000019630	KH_1	PF00013.29	9.3e-68	1	4
ENSNBRP00000019630	KH_1	PF00013.29	9.3e-68	2	4
ENSNBRP00000019630	KH_1	PF00013.29	9.3e-68	3	4
ENSNBRP00000019630	KH_1	PF00013.29	9.3e-68	4	4
ENSNBRP00000019630	KH_2	PF07650.17	5.1e-21	1	2
ENSNBRP00000019630	KH_2	PF07650.17	5.1e-21	2	2
ENSNBRP00000019630	DUF1897	PF09005.10	7.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000020147	-	1794	XM_006792317	ENSNBRP00000019630	597 (aa)	XP_006792380	-

Gene Model

Click here to download ENSNBRG00000015099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015099	fubp1	61	44.643	ENSNBRG00000003872	PCBP2	65	46.296
ENSNBRG00000015099	fubp1	51	35.294	ENSNBRG00000016409	-	61	35.294
ENSNBRG00000015099	fubp1	97	54.560	ENSNBRG00000023797	khsrp	92	52.848
ENSNBRG00000015099	fubp1	53	36.923	ENSNBRG00000016714	-	65	37.143
ENSNBRG00000015099	fubp1	57	42.857	ENSNBRG00000023314	pcbp2	90	42.857
ENSNBRG00000015099	fubp1	98	44.059	ENSNBRG00000024313	-	70	51.667
ENSNBRG00000015099	fubp1	97	48.137	ENSNBRG00000005876	KHSRP	98	48.112
ENSNBRG00000015099	fubp1	94	47.469	ENSNBRG00000006751	FUBP3	94	45.979
ENSNBRG00000015099	fubp1	62	34.375	ENSNBRG00000008100	nova1	68	30.201
ENSNBRG00000015099	fubp1	60	32.948	ENSNBRG00000005961	igf2bp3	61	32.184
ENSNBRG00000015099	fubp1	64	38.356	ENSNBRG00000017646	zgc:110045	50	38.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015099	fubp1	72	77.925	ENSG00000162613	FUBP1	100	69.350	Homo_sapiens
ENSNBRG00000015099	fubp1	99	90.821	ENSAPOG00000014845	fubp1	98	87.480	Acanthochromis_polyacanthus
ENSNBRG00000015099	fubp1	72	74.214	ENSAMEG00000007372	FUBP1	100	67.115	Ailuropoda_melanoleuca
ENSNBRG00000015099	fubp1	100	89.120	ENSACIG00000020024	fubp1	100	89.120	Amphilophus_citrinellus
ENSNBRG00000015099	fubp1	100	95.269	ENSAPEG00000012232	fubp1	100	95.269	Amphiprion_percula
ENSNBRG00000015099	fubp1	99	94.290	ENSATEG00000018619	fubp1	100	92.528	Anabas_testudineus
ENSNBRG00000015099	fubp1	66	79.661	ENSAPLG00000005965	FUBP1	100	69.818	Anas_platyrhynchos
ENSNBRG00000015099	fubp1	72	74.207	ENSACAG00000006310	FUBP1	96	63.636	Anolis_carolinensis
ENSNBRG00000015099	fubp1	100	99.832	ENSACLG00000006708	fubp1	100	99.832	Astatotilapia_calliptera
ENSNBRG00000015099	fubp1	88	82.298	ENSAMXG00000005525	fubp1	99	84.181	Astyanax_mexicanus
ENSNBRG00000015099	fubp1	72	78.146	ENSCJAG00000007062	FUBP1	100	69.612	Callithrix_jacchus
ENSNBRG00000015099	fubp1	72	77.974	ENSCAFG00000020361	FUBP1	100	69.505	Canis_familiaris
ENSNBRG00000015099	fubp1	66	81.390	ENSTSYG00000000148	FUBP1	100	68.482	Carlito_syrichta
ENSNBRG00000015099	fubp1	57	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSNBRG00000015099	fubp1	72	77.753	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSNBRG00000015099	fubp1	72	63.478	ENSCCAG00000036537	FUBP1	100	64.058	Cebus_capucinus
ENSNBRG00000015099	fubp1	72	77.753	ENSCATG00000042126	FUBP1	100	69.350	Cercocebus_atys
ENSNBRG00000015099	fubp1	72	78.153	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSNBRG00000015099	fubp1	72	77.753	ENSCSAG00000001402	FUBP1	100	69.350	Chlorocebus_sabaeus
ENSNBRG00000015099	fubp1	72	77.753	ENSCHOG00000008177	FUBP1	98	68.062	Choloepus_hoffmanni
ENSNBRG00000015099	fubp1	72	79.018	ENSCGRG00001007103	Fubp1	100	68.478	Cricetulus_griseus_chok1gshd
ENSNBRG00000015099	fubp1	66	79.469	ENSCGRG00000003372	Fubp1	100	68.144	Cricetulus_griseus_crigri
ENSNBRG00000015099	fubp1	100	89.936	ENSCSEG00000021412	fubp1	100	88.679	Cynoglossus_semilaevis
ENSNBRG00000015099	fubp1	99	84.380	ENSCVAG00000014487	fubp1	93	90.257	Cyprinodon_variegatus
ENSNBRG00000015099	fubp1	100	77.484	ENSDARG00000029248	fubp1	100	80.901	Danio_rerio
ENSNBRG00000015099	fubp1	72	49.541	ENSDNOG00000034565	-	66	51.152	Dasypus_novemcinctus
ENSNBRG00000015099	fubp1	72	79.195	ENSDORG00000016534	Fubp1	98	69.302	Dipodomys_ordii
ENSNBRG00000015099	fubp1	77	77.485	ENSETEG00000000948	-	58	77.778	Echinops_telfairi
ENSNBRG00000015099	fubp1	58	57.550	ENSEBUG00000016143	fubp1	54	57.550	Eptatretus_burgeri
ENSNBRG00000015099	fubp1	70	82.770	ENSEEUG00000001287	FUBP1	86	69.815	Erinaceus_europaeus
ENSNBRG00000015099	fubp1	100	81.377	ENSELUG00000007990	fubp1	100	82.473	Esox_lucius
ENSNBRG00000015099	fubp1	72	78.492	ENSFALG00000005768	FUBP1	97	69.579	Ficedula_albicollis
ENSNBRG00000015099	fubp1	72	77.533	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSNBRG00000015099	fubp1	100	90.143	ENSFHEG00000005230	fubp1	100	89.984	Fundulus_heteroclitus
ENSNBRG00000015099	fubp1	100	84.127	ENSGMOG00000003370	fubp1	100	84.127	Gadus_morhua
ENSNBRG00000015099	fubp1	72	78.982	ENSGALG00000008939	FUBP1	100	70.963	Gallus_gallus
ENSNBRG00000015099	fubp1	100	88.750	ENSGAFG00000020972	fubp1	100	88.594	Gambusia_affinis
ENSNBRG00000015099	fubp1	100	87.656	ENSGACG00000016563	fubp1	100	88.732	Gasterosteus_aculeatus
ENSNBRG00000015099	fubp1	100	90.184	ENSHBUG00000009835	fubp1	100	94.706	Haplochromis_burtoni
ENSNBRG00000015099	fubp1	73	73.420	ENSHGLG00000002808	-	100	62.636	Heterocephalus_glaber_female
ENSNBRG00000015099	fubp1	72	77.753	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSNBRG00000015099	fubp1	72	77.753	ENSHGLG00100003417	-	100	69.029	Heterocephalus_glaber_male
ENSNBRG00000015099	fubp1	100	85.891	ENSHCOG00000000910	fubp1	100	86.977	Hippocampus_comes
ENSNBRG00000015099	fubp1	100	79.239	ENSIPUG00000009896	fubp1	100	81.300	Ictalurus_punctatus
ENSNBRG00000015099	fubp1	72	80.594	ENSSTOG00000014312	FUBP1	100	69.505	Ictidomys_tridecemlineatus
ENSNBRG00000015099	fubp1	72	79.505	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSNBRG00000015099	fubp1	100	89.727	ENSKMAG00000018897	fubp1	100	89.228	Kryptolebias_marmoratus
ENSNBRG00000015099	fubp1	99	84.054	ENSLBEG00000012700	fubp1	97	82.844	Labrus_bergylta
ENSNBRG00000015099	fubp1	98	71.194	ENSLOCG00000003745	fubp1	99	73.373	Lepisosteus_oculatus
ENSNBRG00000015099	fubp1	72	74.841	ENSLAFG00000003273	FUBP1	99	69.078	Loxodonta_africana
ENSNBRG00000015099	fubp1	72	77.925	ENSMFAG00000031825	FUBP1	100	69.457	Macaca_fascicularis
ENSNBRG00000015099	fubp1	72	80.365	ENSMMUG00000002899	FUBP1	100	69.350	Macaca_mulatta
ENSNBRG00000015099	fubp1	72	77.753	ENSMNEG00000045212	FUBP1	100	69.350	Macaca_nemestrina
ENSNBRG00000015099	fubp1	99	85.952	ENSMAMG00000007489	fubp1	99	84.720	Mastacembelus_armatus
ENSNBRG00000015099	fubp1	100	94.569	ENSMZEG00005024298	fubp1	100	94.569	Maylandia_zebra
ENSNBRG00000015099	fubp1	66	79.710	ENSMGAG00000009424	FUBP1	100	70.792	Meleagris_gallopavo
ENSNBRG00000015099	fubp1	72	78.194	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSNBRG00000015099	fubp1	72	80.594	ENSMOCG00000014751	Fubp1	100	69.683	Microtus_ochrogaster
ENSNBRG00000015099	fubp1	88	90.293	ENSMMOG00000019463	fubp1	99	91.743	Mola_mola
ENSNBRG00000015099	fubp1	69	71.461	ENSMODG00000020804	FUBP1	100	63.150	Monodelphis_domestica
ENSNBRG00000015099	fubp1	100	91.561	ENSMALG00000015173	fubp1	100	91.561	Monopterus_albus
ENSNBRG00000015099	fubp1	72	78.396	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.191	Mus_caroli
ENSNBRG00000015099	fubp1	72	78.174	ENSMUSG00000028034	Fubp1	99	75.000	Mus_musculus
ENSNBRG00000015099	fubp1	72	78.222	MGP_PahariEiJ_G0027191	Fubp1	99	75.048	Mus_pahari
ENSNBRG00000015099	fubp1	72	78.396	MGP_SPRETEiJ_G0026693	Fubp1	99	75.191	Mus_spretus
ENSNBRG00000015099	fubp1	72	74.059	ENSMLUG00000014802	FUBP1	100	66.369	Myotis_lucifugus
ENSNBRG00000015099	fubp1	72	75.278	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSNBRG00000015099	fubp1	72	72.967	ENSNLEG00000009772	FUBP1	100	66.821	Nomascus_leucogenys
ENSNBRG00000015099	fubp1	58	84.314	ENSMEUG00000007917	-	64	69.231	Notamacropus_eugenii
ENSNBRG00000015099	fubp1	71	62.108	ENSOPRG00000001175	FUBP1	98	56.728	Ochotona_princeps
ENSNBRG00000015099	fubp1	99	53.519	ENSODEG00000003657	-	99	51.452	Octodon_degus
ENSNBRG00000015099	fubp1	72	77.753	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSNBRG00000015099	fubp1	99	93.959	ENSONIG00000018381	fubp1	99	93.959	Oreochromis_niloticus
ENSNBRG00000015099	fubp1	61	80.469	ENSOANG00000009777	FUBP1	99	63.651	Ornithorhynchus_anatinus
ENSNBRG00000015099	fubp1	99	92.422	ENSORLG00000003540	fubp1	99	92.092	Oryzias_latipes
ENSNBRG00000015099	fubp1	99	92.691	ENSORLG00020005908	fubp1	99	92.691	Oryzias_latipes_hni
ENSNBRG00000015099	fubp1	99	92.219	ENSORLG00015008779	fubp1	100	88.468	Oryzias_latipes_hsok
ENSNBRG00000015099	fubp1	100	89.431	ENSOMEG00000021943	fubp1	100	89.525	Oryzias_melastigma
ENSNBRG00000015099	fubp1	72	73.904	ENSOGAG00000014233	FUBP1	100	65.379	Otolemur_garnettii
ENSNBRG00000015099	fubp1	72	78.146	ENSOARG00000013259	FUBP1	100	66.866	Ovis_aries
ENSNBRG00000015099	fubp1	72	77.974	ENSPPRG00000000413	FUBP1	100	69.505	Panthera_pardus
ENSNBRG00000015099	fubp1	72	77.974	ENSPTIG00000019450	FUBP1	100	69.505	Panthera_tigris_altaica
ENSNBRG00000015099	fubp1	68	78.810	ENSPSIG00000012965	FUBP1	100	69.984	Pelodiscus_sinensis
ENSNBRG00000015099	fubp1	99	84.814	ENSPMGG00000009060	fubp1	99	83.199	Periophthalmus_magnuspinnatus
ENSNBRG00000015099	fubp1	72	78.842	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSNBRG00000015099	fubp1	64	58.515	ENSPMAG00000001644	-	93	58.515	Petromyzon_marinus
ENSNBRG00000015099	fubp1	100	85.496	ENSPFOG00000000238	fubp1	100	83.459	Poecilia_formosa
ENSNBRG00000015099	fubp1	100	94.272	ENSPLAG00000021170	fubp1	100	94.272	Poecilia_latipinna
ENSNBRG00000015099	fubp1	99	90.584	ENSPMEG00000004747	fubp1	96	91.468	Poecilia_mexicana
ENSNBRG00000015099	fubp1	99	90.431	ENSPREG00000017911	fubp1	99	90.271	Poecilia_reticulata
ENSNBRG00000015099	fubp1	74	77.371	ENSPPYG00000001219	-	68	78.492	Pongo_abelii
ENSNBRG00000015099	fubp1	72	77.925	ENSPCAG00000012617	FUBP1	98	68.012	Procavia_capensis
ENSNBRG00000015099	fubp1	72	78.924	ENSPCOG00000024974	FUBP1	100	69.505	Propithecus_coquereli
ENSNBRG00000015099	fubp1	72	71.806	ENSPVAG00000014637	FUBP1	98	65.116	Pteropus_vampyrus
ENSNBRG00000015099	fubp1	100	94.569	ENSPNYG00000004552	fubp1	100	94.569	Pundamilia_nyererei
ENSNBRG00000015099	fubp1	100	78.907	ENSPNAG00000016207	fubp1	98	80.306	Pygocentrus_nattereri
ENSNBRG00000015099	fubp1	72	78.396	ENSRNOG00000043370	Fubp1	100	68.323	Rattus_norvegicus
ENSNBRG00000015099	fubp1	72	77.753	ENSRBIG00000042950	FUBP1	100	69.350	Rhinopithecus_bieti
ENSNBRG00000015099	fubp1	72	77.753	ENSRROG00000043534	FUBP1	100	69.350	Rhinopithecus_roxellana
ENSNBRG00000015099	fubp1	72	77.974	ENSSBOG00000027299	FUBP1	100	69.505	Saimiri_boliviensis_boliviensis
ENSNBRG00000015099	fubp1	66	78.230	ENSSHAG00000005367	FUBP1	99	70.092	Sarcophilus_harrisii
ENSNBRG00000015099	fubp1	99	79.487	ENSSFOG00015010213	fubp1	98	80.769	Scleropages_formosus
ENSNBRG00000015099	fubp1	100	81.250	ENSSMAG00000012029	fubp1	91	94.872	Scophthalmus_maximus
ENSNBRG00000015099	fubp1	99	91.536	ENSSDUG00000007383	fubp1	95	91.536	Seriola_dumerili
ENSNBRG00000015099	fubp1	100	93.115	ENSSLDG00000022863	fubp1	100	92.951	Seriola_lalandi_dorsalis
ENSNBRG00000015099	fubp1	72	87.356	ENSSARG00000011730	FUBP1	69	71.326	Sorex_araneus
ENSNBRG00000015099	fubp1	99	63.772	ENSSPUG00000008389	FUBP1	99	73.684	Sphenodon_punctatus
ENSNBRG00000015099	fubp1	99	94.643	ENSSPAG00000010161	fubp1	99	94.643	Stegastes_partitus
ENSNBRG00000015099	fubp1	66	78.759	ENSTGUG00000006841	FUBP1	100	69.294	Taeniopygia_guttata
ENSNBRG00000015099	fubp1	96	88.547	ENSTRUG00000004615	fubp1	85	87.179	Takifugu_rubripes
ENSNBRG00000015099	fubp1	76	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSNBRG00000015099	fubp1	72	77.974	ENSTTRG00000000096	FUBP1	98	69.302	Tursiops_truncatus
ENSNBRG00000015099	fubp1	72	77.974	ENSVPAG00000004709	FUBP1	99	69.302	Vicugna_pacos
ENSNBRG00000015099	fubp1	100	84.665	ENSXCOG00000019354	fubp1	100	79.154	Xiphophorus_couchianus
ENSNBRG00000015099	fubp1	96	91.468	ENSXMAG00000007168	fubp1	99	88.224	Xiphophorus_maculatus