EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000015313 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 62686 bases
Position: chrJH422383.1:1641532-1704217
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000019879	SRRM_C	PF15230.6	8.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000020407	-	1431	-	ENSNBRP00000019879	476 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000015313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015313	srrm4	98	70.085	ENSACIG00000002171	srrm4	92	68.803	Amphilophus_citrinellus
ENSNBRG00000015313	srrm4	75	91.667	ENSATEG00000005330	srrm4	89	91.667	Anabas_testudineus
ENSNBRG00000015313	srrm4	100	87.629	ENSACLG00000023532	srrm4	100	87.629	Astatotilapia_calliptera
ENSNBRG00000015313	srrm4	79	74.419	ENSCSEG00000007689	-	78	74.419	Cynoglossus_semilaevis
ENSNBRG00000015313	srrm4	81	44.601	ENSELUG00000004986	srrm4	62	49.355	Esox_lucius
ENSNBRG00000015313	srrm4	68	70.393	ENSFHEG00000005091	srrm4	86	70.393	Fundulus_heteroclitus
ENSNBRG00000015313	srrm4	57	45.955	ENSGMOG00000006714	srrm4	56	51.273	Gadus_morhua
ENSNBRG00000015313	srrm4	98	55.297	ENSGAFG00000006706	srrm4	80	93.939	Gambusia_affinis
ENSNBRG00000015313	srrm4	84	82.421	ENSHBUG00000010505	srrm4	70	84.438	Haplochromis_burtoni
ENSNBRG00000015313	srrm4	98	66.525	ENSMAMG00000004280	srrm4	90	69.527	Mastacembelus_armatus
ENSNBRG00000015313	srrm4	100	87.629	ENSMZEG00005021733	srrm4	100	87.629	Maylandia_zebra
ENSNBRG00000015313	srrm4	98	63.482	ENSMMOG00000000228	srrm4	98	60.805	Mola_mola
ENSNBRG00000015313	srrm4	67	81.337	ENSONIG00000010552	srrm4	70	82.817	Oreochromis_niloticus
ENSNBRG00000015313	srrm4	82	75.735	ENSORLG00015019143	srrm4	98	54.545	Oryzias_latipes_hsok
ENSNBRG00000015313	srrm4	98	51.883	ENSPMGG00000008387	srrm4	76	56.569	Periophthalmus_magnuspinnatus
ENSNBRG00000015313	srrm4	83	94.595	ENSPLAG00000002006	srrm4	88	94.595	Poecilia_latipinna
ENSNBRG00000015313	srrm4	83	94.595	ENSPMEG00000017802	srrm4	89	94.595	Poecilia_mexicana
ENSNBRG00000015313	srrm4	98	57.265	ENSPREG00000004567	srrm4	83	91.667	Poecilia_reticulata
ENSNBRG00000015313	srrm4	100	91.423	ENSPNYG00000007785	srrm4	100	91.423	Pundamilia_nyererei
ENSNBRG00000015313	srrm4	98	59.236	ENSSMAG00000012257	srrm4	99	62.260	Scophthalmus_maximus
ENSNBRG00000015313	srrm4	98	65.469	ENSSDUG00000017519	srrm4	99	70.238	Seriola_dumerili
ENSNBRG00000015313	srrm4	84	72.622	ENSSLDG00000015130	srrm4	77	72.622	Seriola_lalandi_dorsalis
ENSNBRG00000015313	srrm4	99	68.724	ENSSPAG00000016190	srrm4	99	77.015	Stegastes_partitus
ENSNBRG00000015313	srrm4	77	81.395	ENSXMAG00000002658	srrm4	62	81.395	Xiphophorus_maculatus