EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015676 (Gene tree)
Gene ID: 102790753
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoproteins C1/C2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 11895 bases
Position: chrJH422296.1:5717114-5729008
Accession: 102790753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020399	RRM_1	PF00076.22	1.9e-13	1	1
ENSNBRP00000020379	RRM_1	PF00076.22	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000020949	-	855	-	ENSNBRP00000020399	284 (aa)	-	-
ENSNBRT00000020929	-	1828	XM_006792337	ENSNBRP00000020379	320 (aa)	XP_006792400	-

Gene Model

Click here to download ENSNBRG00000015676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015676	-	95	75.912	ENSNBRG00000004912	-	99	76.230
ENSNBRG00000015676	-	79	53.361	ENSNBRG00000011206	-	80	52.101
ENSNBRG00000015676	-	84	42.379	ENSNBRG00000014761	raly	90	42.606
ENSNBRG00000015676	-	77	58.874	ENSNBRG00000011376	-	76	56.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015676	-	87	46.667	ENSG00000184672	RALYL	92	79.487	Homo_sapiens
ENSNBRG00000015676	-	75	91.549	ENSAPOG00000006963	hnrnpc	85	80.075	Acanthochromis_polyacanthus
ENSNBRG00000015676	-	97	96.452	ENSACIG00000016568	-	100	96.452	Amphilophus_citrinellus
ENSNBRG00000015676	-	87	80.242	ENSACIG00000000270	-	99	76.000	Amphilophus_citrinellus
ENSNBRG00000015676	-	100	90.741	ENSAOCG00000021616	-	100	89.815	Amphiprion_ocellaris
ENSNBRG00000015676	-	75	91.549	ENSAOCG00000003896	-	85	80.451	Amphiprion_ocellaris
ENSNBRG00000015676	-	97	81.940	ENSAPEG00000019962	-	99	82.274	Amphiprion_percula
ENSNBRG00000015676	-	75	91.549	ENSAPEG00000001489	-	85	80.451	Amphiprion_percula
ENSNBRG00000015676	-	76	87.500	ENSATEG00000011734	-	99	75.563	Anabas_testudineus
ENSNBRG00000015676	-	83	92.193	ENSATEG00000018006	-	100	88.037	Anabas_testudineus
ENSNBRG00000015676	-	74	54.667	ENSAPLG00000015574	RALYL	80	54.043	Anas_platyrhynchos
ENSNBRG00000015676	-	84	48.611	ENSACAG00000028464	RALYL	79	54.468	Anolis_carolinensis
ENSNBRG00000015676	-	87	47.119	ENSANAG00000023383	RALYL	78	55.752	Aotus_nancymaae
ENSNBRG00000015676	-	95	68.027	ENSACLG00000013636	-	87	79.323	Astatotilapia_calliptera
ENSNBRG00000015676	-	90	98.955	ENSACLG00000005707	-	96	98.955	Astatotilapia_calliptera
ENSNBRG00000015676	-	95	68.027	ENSACLG00000000995	-	99	73.646	Astatotilapia_calliptera
ENSNBRG00000015676	-	68	81.250	ENSAMXG00000042946	hnrnpc	98	76.042	Astyanax_mexicanus
ENSNBRG00000015676	-	77	85.000	ENSAMXG00000034915	zgc:55733	91	75.188	Astyanax_mexicanus
ENSNBRG00000015676	-	87	47.119	ENSCJAG00000000402	RALYL	78	55.752	Callithrix_jacchus
ENSNBRG00000015676	-	84	49.129	ENSCPOG00000012314	RALYL	79	54.274	Cavia_porcellus
ENSNBRG00000015676	-	87	47.119	ENSCCAG00000025003	RALYL	76	79.487	Cebus_capucinus
ENSNBRG00000015676	-	87	46.667	ENSCATG00000042145	RALYL	78	55.752	Cercocebus_atys
ENSNBRG00000015676	-	84	49.129	ENSCLAG00000005228	RALYL	79	54.274	Chinchilla_lanigera
ENSNBRG00000015676	-	74	55.111	ENSCHOG00000013228	RALYL	75	52.174	Choloepus_hoffmanni
ENSNBRG00000015676	-	87	46.667	ENSCANG00000039144	RALYL	78	55.752	Colobus_angolensis_palliatus
ENSNBRG00000015676	-	84	49.306	ENSCGRG00001009241	Ralyl	79	53.617	Cricetulus_griseus_chok1gshd
ENSNBRG00000015676	-	80	89.474	ENSCSEG00000021349	-	82	83.895	Cynoglossus_semilaevis
ENSNBRG00000015676	-	96	63.605	ENSCSEG00000019769	-	99	62.245	Cynoglossus_semilaevis
ENSNBRG00000015676	-	93	59.851	ENSCVAG00000002797	-	86	64.865	Cyprinodon_variegatus
ENSNBRG00000015676	-	100	85.321	ENSCVAG00000016981	-	100	82.875	Cyprinodon_variegatus
ENSNBRG00000015676	-	79	83.186	ENSDARG00000053810	hnrnpc	99	72.812	Danio_rerio
ENSNBRG00000015676	-	76	89.352	ENSDARG00000103845	zgc:55733	99	71.181	Danio_rerio
ENSNBRG00000015676	-	82	50.355	ENSDORG00000003721	Ralyl	79	54.468	Dipodomys_ordii
ENSNBRG00000015676	-	57	57.803	ENSETEG00000014028	RALYL	82	60.870	Echinops_telfairi
ENSNBRG00000015676	-	79	47.619	ENSEBUG00000006049	RALYL	74	47.418	Eptatretus_burgeri
ENSNBRG00000015676	-	75	48.430	ENSEBUG00000012363	hnrnpc	67	46.696	Eptatretus_burgeri
ENSNBRG00000015676	-	82	50.000	ENSEEUG00000007202	RALYL	80	54.701	Erinaceus_europaeus
ENSNBRG00000015676	-	80	80.443	ENSELUG00000007714	-	99	72.281	Esox_lucius
ENSNBRG00000015676	-	96	78.526	ENSELUG00000004132	-	99	77.244	Esox_lucius
ENSNBRG00000015676	-	74	58.605	ENSFALG00000008647	RALYL	96	57.746	Ficedula_albicollis
ENSNBRG00000015676	-	97	81.269	ENSFHEG00000007278	-	100	79.758	Fundulus_heteroclitus
ENSNBRG00000015676	-	93	71.269	ENSFHEG00000003605	-	88	74.539	Fundulus_heteroclitus
ENSNBRG00000015676	-	93	41.515	ENSGALG00000036938	RALYL	92	45.667	Gallus_gallus
ENSNBRG00000015676	-	87	76.241	ENSGAFG00000020486	-	98	69.118	Gambusia_affinis
ENSNBRG00000015676	-	97	86.306	ENSGAFG00000020992	-	100	85.669	Gambusia_affinis
ENSNBRG00000015676	-	79	73.094	ENSGACG00000018932	-	89	68.000	Gasterosteus_aculeatus
ENSNBRG00000015676	-	100	79.697	ENSGACG00000017772	-	97	88.189	Gasterosteus_aculeatus
ENSNBRG00000015676	-	87	46.667	ENSGGOG00000000841	RALYL	78	55.752	Gorilla_gorilla
ENSNBRG00000015676	-	100	99.062	ENSHBUG00000010527	-	100	99.062	Haplochromis_burtoni
ENSNBRG00000015676	-	95	68.367	ENSHBUG00000018342	-	99	66.962	Haplochromis_burtoni
ENSNBRG00000015676	-	84	48.780	ENSHGLG00000004866	RALYL	79	53.846	Heterocephalus_glaber_female
ENSNBRG00000015676	-	84	48.780	ENSHGLG00100017480	RALYL	79	53.846	Heterocephalus_glaber_male
ENSNBRG00000015676	-	82	86.496	ENSHCOG00000012333	hnrnpc	91	86.022	Hippocampus_comes
ENSNBRG00000015676	-	90	76.562	ENSIPUG00000011271	hnrnpc	98	80.617	Ictalurus_punctatus
ENSNBRG00000015676	-	81	82.609	ENSIPUG00000008666	zgc:55733	100	77.293	Ictalurus_punctatus
ENSNBRG00000015676	-	82	50.000	ENSSTOG00000012583	RALYL	80	54.043	Ictidomys_tridecemlineatus
ENSNBRG00000015676	-	93	72.015	ENSKMAG00000011170	-	99	66.071	Kryptolebias_marmoratus
ENSNBRG00000015676	-	100	88.235	ENSKMAG00000018265	-	100	87.616	Kryptolebias_marmoratus
ENSNBRG00000015676	-	95	67.616	ENSLBEG00000024418	-	99	62.783	Labrus_bergylta
ENSNBRG00000015676	-	100	86.250	ENSLBEG00000006193	-	100	87.500	Labrus_bergylta
ENSNBRG00000015676	-	93	72.727	ENSLBEG00000006979	-	99	66.330	Labrus_bergylta
ENSNBRG00000015676	-	83	70.896	ENSLOCG00000002560	hnrnpc	91	71.481	Lepisosteus_oculatus
ENSNBRG00000015676	-	87	46.667	ENSMNEG00000033288	RALYL	78	55.752	Macaca_nemestrina
ENSNBRG00000015676	-	87	46.667	ENSMLEG00000038284	RALYL	78	55.752	Mandrillus_leucophaeus
ENSNBRG00000015676	-	100	90.093	ENSMAMG00000008033	-	100	89.474	Mastacembelus_armatus
ENSNBRG00000015676	-	76	87.907	ENSMAMG00000012236	-	84	81.203	Mastacembelus_armatus
ENSNBRG00000015676	-	95	68.027	ENSMZEG00005020460	-	88	77.567	Maylandia_zebra
ENSNBRG00000015676	-	100	98.750	ENSMZEG00005024249	-	100	98.750	Maylandia_zebra
ENSNBRG00000015676	-	84	49.306	ENSMAUG00000015149	Ralyl	79	53.617	Mesocricetus_auratus
ENSNBRG00000015676	-	87	47.635	ENSMICG00000005558	RALYL	79	79.487	Microcebus_murinus
ENSNBRG00000015676	-	84	49.306	ENSMOCG00000017371	Ralyl	79	53.617	Microtus_ochrogaster
ENSNBRG00000015676	-	83	82.264	ENSMMOG00000021465	-	92	80.755	Mola_mola
ENSNBRG00000015676	-	97	85.145	ENSMMOG00000019520	-	100	82.653	Mola_mola
ENSNBRG00000015676	-	74	81.517	ENSMALG00000007520	-	99	69.039	Monopterus_albus
ENSNBRG00000015676	-	83	88.015	ENSMALG00000014623	-	84	88.390	Monopterus_albus
ENSNBRG00000015676	-	84	48.958	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSNBRG00000015676	-	84	50.000	ENSMPUG00000010724	RALYL	79	53.617	Mustela_putorius_furo
ENSNBRG00000015676	-	84	49.306	ENSNGAG00000013375	Ralyl	79	53.617	Nannospalax_galili
ENSNBRG00000015676	-	84	49.117	ENSNLEG00000002702	RALYL	74	55.752	Nomascus_leucogenys
ENSNBRG00000015676	-	63	51.295	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSNBRG00000015676	-	84	48.780	ENSODEG00000001012	RALYL	79	54.274	Octodon_degus
ENSNBRG00000015676	-	79	83.529	ENSONIG00000007859	-	93	81.319	Oreochromis_niloticus
ENSNBRG00000015676	-	100	99.375	ENSONIG00000018350	-	100	99.375	Oreochromis_niloticus
ENSNBRG00000015676	-	100	86.787	ENSORLG00000003144	-	100	86.787	Oryzias_latipes
ENSNBRG00000015676	-	79	72.374	ENSORLG00000009999	-	85	69.403	Oryzias_latipes
ENSNBRG00000015676	-	79	71.984	ENSORLG00020018228	hnrnpc	85	69.030	Oryzias_latipes_hni
ENSNBRG00000015676	-	100	86.567	ENSORLG00015009460	-	100	86.567	Oryzias_latipes_hsok
ENSNBRG00000015676	-	79	72.374	ENSORLG00015019755	-	85	69.403	Oryzias_latipes_hsok
ENSNBRG00000015676	-	79	73.541	ENSOMEG00000020488	-	85	70.522	Oryzias_melastigma
ENSNBRG00000015676	-	100	88.820	ENSOMEG00000022665	-	100	89.441	Oryzias_melastigma
ENSNBRG00000015676	-	87	46.667	ENSPPAG00000038705	RALYL	78	55.752	Pan_paniscus
ENSNBRG00000015676	-	87	49.832	ENSPPRG00000018612	RALYL	78	55.947	Panthera_pardus
ENSNBRG00000015676	-	87	49.832	ENSPTIG00000020331	RALYL	78	55.947	Panthera_tigris_altaica
ENSNBRG00000015676	-	87	46.667	ENSPTRG00000020381	RALYL	78	55.752	Pan_troglodytes
ENSNBRG00000015676	-	87	46.667	ENSPANG00000029305	RALYL	78	55.752	Papio_anubis
ENSNBRG00000015676	-	92	75.564	ENSPKIG00000008592	-	100	76.524	Paramormyrops_kingsleyae
ENSNBRG00000015676	-	98	74.534	ENSPKIG00000022837	-	98	79.814	Paramormyrops_kingsleyae
ENSNBRG00000015676	-	84	48.966	ENSPSIG00000011135	RALYL	78	54.468	Pelodiscus_sinensis
ENSNBRG00000015676	-	96	82.909	ENSPMGG00000013144	-	99	79.422	Periophthalmus_magnuspinnatus
ENSNBRG00000015676	-	95	70.397	ENSPMGG00000017774	-	95	68.182	Periophthalmus_magnuspinnatus
ENSNBRG00000015676	-	84	49.306	ENSPEMG00000016447	Ralyl	79	53.617	Peromyscus_maniculatus_bairdii
ENSNBRG00000015676	-	74	54.425	ENSPMAG00000002407	RALYL	97	52.679	Petromyzon_marinus
ENSNBRG00000015676	-	87	76.868	ENSPFOG00000001583	-	99	68.012	Poecilia_formosa
ENSNBRG00000015676	-	100	85.802	ENSPFOG00000002643	-	100	84.877	Poecilia_formosa
ENSNBRG00000015676	-	100	84.923	ENSPLAG00000000061	-	100	86.769	Poecilia_latipinna
ENSNBRG00000015676	-	87	75.445	ENSPLAG00000015305	-	99	66.770	Poecilia_latipinna
ENSNBRG00000015676	-	100	85.185	ENSPMEG00000016524	-	100	84.259	Poecilia_mexicana
ENSNBRG00000015676	-	87	78.369	ENSPMEG00000004802	-	98	67.925	Poecilia_mexicana
ENSNBRG00000015676	-	83	89.139	ENSPREG00000001852	-	89	88.390	Poecilia_reticulata
ENSNBRG00000015676	-	79	78.516	ENSPREG00000007928	-	87	75.277	Poecilia_reticulata
ENSNBRG00000015676	-	74	48.571	ENSPPYG00000018710	-	68	73.786	Pongo_abelii
ENSNBRG00000015676	-	82	49.110	ENSPVAG00000010821	RALYL	78	53.419	Pteropus_vampyrus
ENSNBRG00000015676	-	81	82.692	ENSPNYG00000020293	-	87	80.000	Pundamilia_nyererei
ENSNBRG00000015676	-	100	96.886	ENSPNYG00000003747	-	100	96.886	Pundamilia_nyererei
ENSNBRG00000015676	-	79	81.858	ENSPNAG00000015686	hnrnpc	89	79.026	Pygocentrus_nattereri
ENSNBRG00000015676	-	83	74.539	ENSPNAG00000019200	zgc:55733	86	74.539	Pygocentrus_nattereri
ENSNBRG00000015676	-	84	49.117	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSNBRG00000015676	-	90	76.172	ENSSFOG00015012015	-	100	76.895	Scleropages_formosus
ENSNBRG00000015676	-	90	75.676	ENSSFOG00015012924	-	80	100.000	Scleropages_formosus
ENSNBRG00000015676	-	95	76.144	ENSSMAG00000013592	-	99	73.832	Scophthalmus_maximus
ENSNBRG00000015676	-	100	85.933	ENSSMAG00000011147	-	100	85.933	Scophthalmus_maximus
ENSNBRG00000015676	-	100	87.188	ENSSDUG00000006730	-	100	86.250	Seriola_dumerili
ENSNBRG00000015676	-	93	74.812	ENSSDUG00000001723	-	99	73.520	Seriola_dumerili
ENSNBRG00000015676	-	93	75.188	ENSSLDG00000007454	-	87	81.111	Seriola_lalandi_dorsalis
ENSNBRG00000015676	-	83	88.015	ENSSLDG00000007474	-	92	87.266	Seriola_lalandi_dorsalis
ENSNBRG00000015676	-	93	74.812	ENSSPAG00000023204	-	85	81.203	Stegastes_partitus
ENSNBRG00000015676	-	100	90.654	ENSSPAG00000013996	-	100	90.343	Stegastes_partitus
ENSNBRG00000015676	-	83	47.917	ENSTGUG00000011689	RALYL	78	55.217	Taeniopygia_guttata
ENSNBRG00000015676	-	76	87.500	ENSTRUG00000020158	-	98	68.456	Takifugu_rubripes
ENSNBRG00000015676	-	80	78.431	ENSTNIG00000000334	-	94	76.718	Tetraodon_nigroviridis
ENSNBRG00000015676	-	80	77.481	ENSTNIG00000007427	-	84	77.099	Tetraodon_nigroviridis
ENSNBRG00000015676	-	74	50.224	ENSTBEG00000005551	RALYL	92	48.101	Tupaia_belangeri
ENSNBRG00000015676	-	84	47.350	ENSTTRG00000015762	RALYL	78	52.838	Tursiops_truncatus
ENSNBRG00000015676	-	84	46.953	ENSVPAG00000008501	RALYL	78	51.542	Vicugna_pacos
ENSNBRG00000015676	-	54	90.062	ENSXCOG00000019434	-	69	88.344	Xiphophorus_couchianus
ENSNBRG00000015676	-	90	70.408	ENSXCOG00000006552	-	92	66.781	Xiphophorus_couchianus
ENSNBRG00000015676	-	83	89.139	ENSXMAG00000022849	-	86	88.390	Xiphophorus_maculatus
ENSNBRG00000015676	-	87	76.596	ENSXMAG00000009333	-	99	66.460	Xiphophorus_maculatus