EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015774 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2826 bases
Position: chrJH422290.1:8100421-8103246
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	1	6
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	2	6
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	3	6
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	4	6
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	5	6
ENSNBRP00000020513	zf-C2H2	PF00096.26	2.6e-30	6	6
ENSNBRP00000020513	zf-met	PF12874.7	1.1e-07	1	2
ENSNBRP00000020513	zf-met	PF12874.7	1.1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021067	-	1179	-	ENSNBRP00000020513	392 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000015774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015774	gfi1ab	100	62.438	ENSNBRG00000002673	gfi1aa	100	62.687
ENSNBRG00000015774	gfi1ab	69	41.379	ENSNBRG00000006757	-	88	41.379
ENSNBRG00000015774	gfi1ab	69	42.308	ENSNBRG00000018449	PRDM15	56	42.308
ENSNBRG00000015774	gfi1ab	73	38.095	ENSNBRG00000021111	zbtb16b	51	38.095
ENSNBRG00000015774	gfi1ab	59	40.404	ENSNBRG00000021960	zbtb17	51	40.404
ENSNBRG00000015774	gfi1ab	68	43.972	ENSNBRG00000014088	-	98	47.115
ENSNBRG00000015774	gfi1ab	55	39.732	ENSNBRG00000015873	-	94	45.000
ENSNBRG00000015774	gfi1ab	58	43.373	ENSNBRG00000007311	-	91	43.373
ENSNBRG00000015774	gfi1ab	52	42.857	ENSNBRG00000016169	-	67	42.857
ENSNBRG00000015774	gfi1ab	50	40.741	ENSNBRG00000000305	-	87	40.741
ENSNBRG00000015774	gfi1ab	63	47.273	ENSNBRG00000019481	-	90	47.273
ENSNBRG00000015774	gfi1ab	60	42.262	ENSNBRG00000024066	-	83	42.500
ENSNBRG00000015774	gfi1ab	60	44.792	ENSNBRG00000021247	-	54	44.792
ENSNBRG00000015774	gfi1ab	51	43.709	ENSNBRG00000013501	-	100	43.709
ENSNBRG00000015774	gfi1ab	56	41.176	ENSNBRG00000015442	ZNF319	94	41.176
ENSNBRG00000015774	gfi1ab	52	48.352	ENSNBRG00000003124	-	96	46.099
ENSNBRG00000015774	gfi1ab	57	40.566	ENSNBRG00000020314	si:dkey-89b17.4	60	40.566
ENSNBRG00000015774	gfi1ab	63	41.420	ENSNBRG00000005805	-	93	41.420
ENSNBRG00000015774	gfi1ab	63	42.254	ENSNBRG00000008106	-	91	42.254
ENSNBRG00000015774	gfi1ab	60	42.945	ENSNBRG00000024048	-	94	42.945
ENSNBRG00000015774	gfi1ab	53	43.182	ENSNBRG00000008123	-	79	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015774	gfi1ab	100	61.839	ENSG00000162676	GFI1	100	62.299	Homo_sapiens
ENSNBRG00000015774	gfi1ab	100	86.146	ENSAPOG00000015189	gfi1ab	100	86.146	Acanthochromis_polyacanthus
ENSNBRG00000015774	gfi1ab	100	88.520	ENSACIG00000016354	gfi1ab	100	88.520	Amphilophus_citrinellus
ENSNBRG00000015774	gfi1ab	100	76.263	ENSAOCG00000008339	gfi1ab	100	76.263	Amphiprion_ocellaris
ENSNBRG00000015774	gfi1ab	100	86.432	ENSAPEG00000023870	gfi1ab	100	86.432	Amphiprion_percula
ENSNBRG00000015774	gfi1ab	100	79.337	ENSATEG00000009167	gfi1ab	89	79.337	Anabas_testudineus
ENSNBRG00000015774	gfi1ab	85	66.762	ENSAPLG00000015700	GFI1	99	66.762	Anas_platyrhynchos
ENSNBRG00000015774	gfi1ab	100	63.923	ENSACAG00000004498	GFI1	100	64.649	Anolis_carolinensis
ENSNBRG00000015774	gfi1ab	100	61.927	ENSANAG00000019656	GFI1	100	62.385	Aotus_nancymaae
ENSNBRG00000015774	gfi1ab	100	95.408	ENSACLG00000026458	gfi1ab	93	95.408	Astatotilapia_calliptera
ENSNBRG00000015774	gfi1ab	100	64.677	ENSAMXG00000039600	gfi1ab	100	64.677	Astyanax_mexicanus
ENSNBRG00000015774	gfi1ab	100	53.435	ENSAMXG00000006669	GFI1	100	53.435	Astyanax_mexicanus
ENSNBRG00000015774	gfi1ab	100	61.009	ENSBTAG00000016723	GFI1	100	63.073	Bos_taurus
ENSNBRG00000015774	gfi1ab	100	61.927	ENSCJAG00000017609	GFI1	100	61.927	Callithrix_jacchus
ENSNBRG00000015774	gfi1ab	100	60.369	ENSCAFG00000020155	GFI1	100	62.442	Canis_familiaris
ENSNBRG00000015774	gfi1ab	100	60.369	ENSCAFG00020013371	GFI1	88	62.442	Canis_lupus_dingo
ENSNBRG00000015774	gfi1ab	100	60.557	ENSCHIG00000016135	GFI1	100	62.181	Capra_hircus
ENSNBRG00000015774	gfi1ab	100	61.009	ENSCPOG00000011727	GFI1	100	61.927	Cavia_porcellus
ENSNBRG00000015774	gfi1ab	100	61.574	ENSCCAG00000036072	GFI1	100	61.982	Cebus_capucinus
ENSNBRG00000015774	gfi1ab	100	62.299	ENSCATG00000037873	GFI1	100	62.299	Cercocebus_atys
ENSNBRG00000015774	gfi1ab	100	65.926	ENSCLAG00000005915	GFI1	100	60.314	Chinchilla_lanigera
ENSNBRG00000015774	gfi1ab	98	56.499	ENSCSAG00000001469	GFI1	100	57.029	Chlorocebus_sabaeus
ENSNBRG00000015774	gfi1ab	100	62.529	ENSCANG00000034077	GFI1	100	62.529	Colobus_angolensis_palliatus
ENSNBRG00000015774	gfi1ab	100	58.916	ENSCGRG00001015432	Gfi1	100	61.731	Cricetulus_griseus_chok1gshd
ENSNBRG00000015774	gfi1ab	100	63.210	ENSCSEG00000017729	GFI1	100	63.457	Cynoglossus_semilaevis
ENSNBRG00000015774	gfi1ab	100	79.241	ENSCVAG00000011828	gfi1ab	100	79.241	Cyprinodon_variegatus
ENSNBRG00000015774	gfi1ab	100	58.134	ENSCVAG00000004930	GFI1	100	60.723	Cyprinodon_variegatus
ENSNBRG00000015774	gfi1ab	100	71.464	ENSDARG00000044457	gfi1ab	100	71.464	Danio_rerio
ENSNBRG00000015774	gfi1ab	100	60.599	ENSDNOG00000000782	GFI1	97	62.442	Dasypus_novemcinctus
ENSNBRG00000015774	gfi1ab	100	62.704	ENSEASG00005015509	GFI1	86	63.403	Equus_asinus_asinus
ENSNBRG00000015774	gfi1ab	93	53.960	ENSECAG00000006647	GFI1	94	54.703	Equus_caballus
ENSNBRG00000015774	gfi1ab	100	61.124	ENSEEUG00000000198	GFI1	100	62.238	Erinaceus_europaeus
ENSNBRG00000015774	gfi1ab	100	61.975	ENSELUG00000019033	GFI1	100	62.222	Esox_lucius
ENSNBRG00000015774	gfi1ab	100	73.956	ENSELUG00000003015	gfi1ab	99	73.956	Esox_lucius
ENSNBRG00000015774	gfi1ab	100	60.000	ENSFCAG00000005914	GFI1	100	62.356	Felis_catus
ENSNBRG00000015774	gfi1ab	100	81.519	ENSFHEG00000010997	gfi1ab	100	81.519	Fundulus_heteroclitus
ENSNBRG00000015774	gfi1ab	100	62.222	ENSFHEG00000000341	GFI1	100	62.469	Fundulus_heteroclitus
ENSNBRG00000015774	gfi1ab	100	72.431	ENSGMOG00000007737	gfi1ab	100	72.431	Gadus_morhua
ENSNBRG00000015774	gfi1ab	100	65.450	ENSGALG00000043650	GFI1	100	65.937	Gallus_gallus
ENSNBRG00000015774	gfi1ab	100	59.466	ENSGAFG00000018063	GFI1	100	61.071	Gambusia_affinis
ENSNBRG00000015774	gfi1ab	100	82.323	ENSGAFG00000016637	gfi1ab	100	82.323	Gambusia_affinis
ENSNBRG00000015774	gfi1ab	100	83.929	ENSGACG00000004257	gfi1ab	97	84.184	Gasterosteus_aculeatus
ENSNBRG00000015774	gfi1ab	100	61.839	ENSGGOG00000005320	GFI1	100	62.299	Gorilla_gorilla
ENSNBRG00000015774	gfi1ab	100	94.388	ENSHBUG00000011969	gfi1ab	100	94.388	Haplochromis_burtoni
ENSNBRG00000015774	gfi1ab	100	61.253	ENSHGLG00000008020	GFI1	100	62.877	Heterocephalus_glaber_female
ENSNBRG00000015774	gfi1ab	100	61.253	ENSHGLG00100000610	GFI1	100	62.877	Heterocephalus_glaber_male
ENSNBRG00000015774	gfi1ab	100	62.559	ENSHCOG00000008590	gfi1ab	100	62.559	Hippocampus_comes
ENSNBRG00000015774	gfi1ab	100	57.568	ENSHCOG00000019555	GFI1	100	71.053	Hippocampus_comes
ENSNBRG00000015774	gfi1ab	100	65.414	ENSIPUG00000010071	gfi1ab	87	65.578	Ictalurus_punctatus
ENSNBRG00000015774	gfi1ab	100	62.162	ENSIPUG00000013414	GFI1	100	62.162	Ictalurus_punctatus
ENSNBRG00000015774	gfi1ab	100	60.544	ENSSTOG00000014583	GFI1	100	61.224	Ictidomys_tridecemlineatus
ENSNBRG00000015774	gfi1ab	100	80.612	ENSKMAG00000003810	gfi1ab	100	80.612	Kryptolebias_marmoratus
ENSNBRG00000015774	gfi1ab	100	84.383	ENSLBEG00000027776	gfi1ab	100	84.383	Labrus_bergylta
ENSNBRG00000015774	gfi1ab	100	67.488	ENSLACG00000013362	GFI1	98	67.488	Latimeria_chalumnae
ENSNBRG00000015774	gfi1ab	100	70.297	ENSLOCG00000004711	gfi1ab	100	70.545	Lepisosteus_oculatus
ENSNBRG00000015774	gfi1ab	100	60.417	ENSLAFG00000018346	GFI1	100	61.972	Loxodonta_africana
ENSNBRG00000015774	gfi1ab	100	62.299	ENSMFAG00000045801	GFI1	100	62.299	Macaca_fascicularis
ENSNBRG00000015774	gfi1ab	100	62.299	ENSMNEG00000036338	GFI1	100	62.299	Macaca_nemestrina
ENSNBRG00000015774	gfi1ab	100	62.299	ENSMLEG00000036181	GFI1	100	62.299	Mandrillus_leucophaeus
ENSNBRG00000015774	gfi1ab	100	86.224	ENSMAMG00000008125	gfi1ab	100	86.224	Mastacembelus_armatus
ENSNBRG00000015774	gfi1ab	100	94.898	ENSMZEG00005009895	gfi1ab	100	94.898	Maylandia_zebra
ENSNBRG00000015774	gfi1ab	86	66.761	ENSMGAG00000008187	GFI1	99	67.898	Meleagris_gallopavo
ENSNBRG00000015774	gfi1ab	100	58.730	ENSMICG00000047208	GFI1	100	60.771	Microcebus_murinus
ENSNBRG00000015774	gfi1ab	100	74.809	ENSMMOG00000005556	gfi1ab	100	74.809	Mola_mola
ENSNBRG00000015774	gfi1ab	100	60.277	ENSMODG00000011802	GFI1	100	62.150	Monodelphis_domestica
ENSNBRG00000015774	gfi1ab	100	82.653	ENSMALG00000014672	gfi1ab	100	82.653	Monopterus_albus
ENSNBRG00000015774	gfi1ab	100	59.540	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSNBRG00000015774	gfi1ab	100	60.920	ENSMUSG00000029275	Gfi1	100	61.379	Mus_musculus
ENSNBRG00000015774	gfi1ab	100	60.690	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSNBRG00000015774	gfi1ab	100	60.920	MGP_SPRETEiJ_G0028507	Gfi1	100	62.069	Mus_spretus
ENSNBRG00000015774	gfi1ab	100	64.851	ENSMPUG00000004178	GFI1	97	65.347	Mustela_putorius_furo
ENSNBRG00000015774	gfi1ab	100	61.949	ENSMLUG00000015191	GFI1	97	61.949	Myotis_lucifugus
ENSNBRG00000015774	gfi1ab	85	62.865	ENSNLEG00000010470	GFI1	92	64.987	Nomascus_leucogenys
ENSNBRG00000015774	gfi1ab	100	61.521	ENSOPRG00000001473	GFI1	100	62.212	Ochotona_princeps
ENSNBRG00000015774	gfi1ab	100	95.918	ENSONIG00000019246	gfi1ab	100	95.918	Oreochromis_niloticus
ENSNBRG00000015774	gfi1ab	98	54.450	ENSOCUG00000023553	GFI1	93	56.283	Oryctolagus_cuniculus
ENSNBRG00000015774	gfi1ab	100	77.041	ENSORLG00000013806	gfi1ab	100	77.041	Oryzias_latipes
ENSNBRG00000015774	gfi1ab	100	62.129	ENSORLG00000005060	GFI1	100	62.129	Oryzias_latipes
ENSNBRG00000015774	gfi1ab	100	57.286	ENSORLG00020002817	GFI1	100	57.286	Oryzias_latipes_hni
ENSNBRG00000015774	gfi1ab	100	76.531	ENSORLG00020001602	gfi1ab	100	76.531	Oryzias_latipes_hni
ENSNBRG00000015774	gfi1ab	100	60.741	ENSORLG00015006070	GFI1	100	61.728	Oryzias_latipes_hsok
ENSNBRG00000015774	gfi1ab	100	61.750	ENSOMEG00000016722	GFI1	100	61.750	Oryzias_melastigma
ENSNBRG00000015774	gfi1ab	100	64.250	ENSOGAG00000027913	GFI1	100	64.750	Otolemur_garnettii
ENSNBRG00000015774	gfi1ab	98	98.095	ENSOARG00000016329	GFI1	94	69.173	Ovis_aries
ENSNBRG00000015774	gfi1ab	100	64.975	ENSPPAG00000042186	GFI1	100	65.482	Pan_paniscus
ENSNBRG00000015774	gfi1ab	100	60.000	ENSPPRG00000007521	GFI1	100	62.356	Panthera_pardus
ENSNBRG00000015774	gfi1ab	100	61.839	ENSPTRG00000043053	GFI1	100	62.299	Pan_troglodytes
ENSNBRG00000015774	gfi1ab	100	62.299	ENSPANG00000016433	GFI1	100	62.299	Papio_anubis
ENSNBRG00000015774	gfi1ab	100	71.852	ENSPKIG00000004263	GFI1	100	71.852	Paramormyrops_kingsleyae
ENSNBRG00000015774	gfi1ab	85	65.730	ENSPSIG00000008734	GFI1	97	66.292	Pelodiscus_sinensis
ENSNBRG00000015774	gfi1ab	99	92.262	ENSPMGG00000011041	GFI1	53	92.262	Periophthalmus_magnuspinnatus
ENSNBRG00000015774	gfi1ab	100	76.203	ENSPMGG00000012546	gfi1ab	100	76.709	Periophthalmus_magnuspinnatus
ENSNBRG00000015774	gfi1ab	100	61.521	ENSPCIG00000013728	GFI1	100	63.170	Phascolarctos_cinereus
ENSNBRG00000015774	gfi1ab	100	82.576	ENSPFOG00000023214	gfi1ab	100	82.576	Poecilia_formosa
ENSNBRG00000015774	gfi1ab	100	59.662	ENSPLAG00000005376	GFI1	91	61.836	Poecilia_latipinna
ENSNBRG00000015774	gfi1ab	100	82.576	ENSPLAG00000010879	gfi1ab	100	82.576	Poecilia_latipinna
ENSNBRG00000015774	gfi1ab	100	59.902	ENSPMEG00000019299	GFI1	100	62.439	Poecilia_mexicana
ENSNBRG00000015774	gfi1ab	100	82.828	ENSPMEG00000013694	gfi1ab	100	82.828	Poecilia_mexicana
ENSNBRG00000015774	gfi1ab	100	54.912	ENSPREG00000007997	GFI1	100	55.357	Poecilia_reticulata
ENSNBRG00000015774	gfi1ab	100	82.785	ENSPREG00000014097	gfi1ab	100	82.785	Poecilia_reticulata
ENSNBRG00000015774	gfi1ab	100	50.339	ENSPCAG00000011020	GFI1	100	50.339	Procavia_capensis
ENSNBRG00000015774	gfi1ab	100	60.091	ENSPCOG00000020540	GFI1	100	60.998	Propithecus_coquereli
ENSNBRG00000015774	gfi1ab	100	61.772	ENSPVAG00000006928	GFI1	100	62.617	Pteropus_vampyrus
ENSNBRG00000015774	gfi1ab	100	95.408	ENSPNYG00000021183	gfi1ab	100	95.408	Pundamilia_nyererei
ENSNBRG00000015774	gfi1ab	100	64.128	ENSPNAG00000027258	gfi1ab	100	64.128	Pygocentrus_nattereri
ENSNBRG00000015774	gfi1ab	100	58.477	ENSPNAG00000028014	GFI1	100	58.477	Pygocentrus_nattereri
ENSNBRG00000015774	gfi1ab	100	65.432	ENSPNAG00000014299	-	98	65.432	Pygocentrus_nattereri
ENSNBRG00000015774	gfi1ab	100	61.663	ENSRNOG00000002042	Gfi1	100	61.379	Rattus_norvegicus
ENSNBRG00000015774	gfi1ab	100	61.839	ENSRBIG00000036467	GFI1	100	62.299	Rhinopithecus_bieti
ENSNBRG00000015774	gfi1ab	100	61.839	ENSRROG00000031687	GFI1	100	62.299	Rhinopithecus_roxellana
ENSNBRG00000015774	gfi1ab	100	62.125	ENSSBOG00000031300	GFI1	100	62.529	Saimiri_boliviensis_boliviensis
ENSNBRG00000015774	gfi1ab	100	71.852	ENSSFOG00015020295	gfi1	100	71.852	Scleropages_formosus
ENSNBRG00000015774	gfi1ab	98	57.018	ENSSFOG00015008114	-	85	57.018	Scleropages_formosus
ENSNBRG00000015774	gfi1ab	100	80.303	ENSSMAG00000002782	gfi1ab	100	80.303	Scophthalmus_maximus
ENSNBRG00000015774	gfi1ab	100	83.673	ENSSDUG00000022410	gfi1ab	100	83.929	Seriola_dumerili
ENSNBRG00000015774	gfi1ab	100	83.418	ENSSLDG00000020163	gfi1ab	100	83.673	Seriola_lalandi_dorsalis
ENSNBRG00000015774	gfi1ab	78	90.909	ENSSPAG00000009140	gfi1ab	100	89.324	Stegastes_partitus
ENSNBRG00000015774	gfi1ab	100	63.318	ENSSSCG00000006902	GFI1	100	63.256	Sus_scrofa
ENSNBRG00000015774	gfi1ab	85	67.622	ENSTGUG00000006060	GFI1	100	68.195	Taeniopygia_guttata
ENSNBRG00000015774	gfi1ab	100	78.626	ENSTRUG00000000415	gfi1ab	100	78.626	Takifugu_rubripes
ENSNBRG00000015774	gfi1ab	100	72.544	ENSTNIG00000000651	gfi1ab	97	72.544	Tetraodon_nigroviridis
ENSNBRG00000015774	gfi1ab	100	61.395	ENSTTRG00000000082	GFI1	100	63.488	Tursiops_truncatus
ENSNBRG00000015774	gfi1ab	100	63.789	ENSUAMG00000021124	GFI1	91	64.269	Ursus_americanus
ENSNBRG00000015774	gfi1ab	100	65.250	ENSXETG00000023006	gfi1	98	65.750	Xenopus_tropicalis
ENSNBRG00000015774	gfi1ab	100	82.532	ENSXMAG00000010523	gfi1ab	100	82.532	Xiphophorus_maculatus
ENSNBRG00000015774	gfi1ab	86	55.337	ENSXMAG00000009274	GFI1	70	56.303	Xiphophorus_maculatus