EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015794 (Gene tree)
Gene ID: 102786754
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin-2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 16673 bases
Position: chrJH422289.1:5265517-5282189
Accession: 102786754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020643	PAM2	PF07145.15	5.7e-06	1	1
ENSNBRP00000020634	PAM2	PF07145.15	5.9e-06	1	1
ENSNBRP00000020643	LsmAD	PF06741.13	3e-14	1	1
ENSNBRP00000020634	LsmAD	PF06741.13	3.1e-14	1	1
ENSNBRP00000020643	SM-ATX	PF14438.6	1.7e-20	1	1
ENSNBRP00000020634	SM-ATX	PF14438.6	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021192	-	3177	-	ENSNBRP00000020634	1058 (aa)	-	-
ENSNBRT00000021202	-	3108	XM_006789868	ENSNBRP00000020643	1035 (aa)	XP_006789931	-

Gene Model

Click here to download ENSNBRG00000015794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015794	atxn2	71	51.254	ENSNBRG00000012039	-	64	51.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015794	atxn2	99	60.298	ENSG00000204842	ATXN2	95	72.789	Homo_sapiens
ENSNBRG00000015794	atxn2	93	93.662	ENSAPOG00000014663	atxn2	94	95.341	Acanthochromis_polyacanthus
ENSNBRG00000015794	atxn2	99	59.739	ENSAMEG00000013747	ATXN2	97	61.137	Ailuropoda_melanoleuca
ENSNBRG00000015794	atxn2	99	89.268	ENSACIG00000004928	atxn2	99	89.494	Amphilophus_citrinellus
ENSNBRG00000015794	atxn2	65	83.148	ENSAOCG00000001107	atxn2	95	93.040	Amphiprion_ocellaris
ENSNBRG00000015794	atxn2	93	94.982	ENSAPEG00000020250	atxn2	93	94.982	Amphiprion_percula
ENSNBRG00000015794	atxn2	99	81.979	ENSATEG00000018587	atxn2	99	83.256	Anabas_testudineus
ENSNBRG00000015794	atxn2	99	60.833	ENSAPLG00000008724	ATXN2	97	62.315	Anas_platyrhynchos
ENSNBRG00000015794	atxn2	99	57.301	ENSACAG00000002419	ATXN2	97	59.482	Anolis_carolinensis
ENSNBRG00000015794	atxn2	99	60.223	ENSANAG00000022522	ATXN2	99	60.545	Aotus_nancymaae
ENSNBRG00000015794	atxn2	99	94.245	ENSACLG00000013359	atxn2	97	94.245	Astatotilapia_calliptera
ENSNBRG00000015794	atxn2	99	60.640	ENSBTAG00000022069	ATXN2	99	61.287	Bos_taurus
ENSNBRG00000015794	atxn2	99	60.037	ENSCJAG00000011756	ATXN2	99	60.019	Callithrix_jacchus
ENSNBRG00000015794	atxn2	99	59.590	ENSCAFG00000008606	ATXN2	79	60.987	Canis_familiaris
ENSNBRG00000015794	atxn2	99	59.646	ENSCAFG00020017041	ATXN2	99	61.044	Canis_lupus_dingo
ENSNBRG00000015794	atxn2	99	60.075	ENSCHIG00000012141	ATXN2	80	61.567	Capra_hircus
ENSNBRG00000015794	atxn2	99	60.298	ENSTSYG00000002717	ATXN2	99	60.419	Carlito_syrichta
ENSNBRG00000015794	atxn2	81	53.502	ENSCAPG00000013332	ATXN2	97	54.325	Cavia_aperea
ENSNBRG00000015794	atxn2	99	60.335	ENSCPOG00000001390	ATXN2	96	60.795	Cavia_porcellus
ENSNBRG00000015794	atxn2	99	60.056	ENSCCAG00000026267	ATXN2	99	60.545	Cebus_capucinus
ENSNBRG00000015794	atxn2	99	60.112	ENSCATG00000017877	ATXN2	99	60.113	Cercocebus_atys
ENSNBRG00000015794	atxn2	99	60.186	ENSCLAG00000009324	ATXN2	96	60.782	Chinchilla_lanigera
ENSNBRG00000015794	atxn2	99	60.298	ENSCSAG00000002590	ATXN2	90	61.510	Chlorocebus_sabaeus
ENSNBRG00000015794	atxn2	79	63.208	ENSCHOG00000004284	ATXN2	83	63.208	Choloepus_hoffmanni
ENSNBRG00000015794	atxn2	99	59.925	ENSCANG00000042302	ATXN2	99	60.455	Colobus_angolensis_palliatus
ENSNBRG00000015794	atxn2	99	57.836	ENSCGRG00001022603	Atxn2	81	58.824	Cricetulus_griseus_chok1gshd
ENSNBRG00000015794	atxn2	99	59.777	ENSCGRG00000015823	Atxn2	96	60.212	Cricetulus_griseus_crigri
ENSNBRG00000015794	atxn2	99	63.889	ENSCSEG00000018366	atxn2	68	77.029	Cynoglossus_semilaevis
ENSNBRG00000015794	atxn2	92	86.572	ENSCSEG00000009072	-	97	76.676	Cynoglossus_semilaevis
ENSNBRG00000015794	atxn2	99	80.508	ENSCVAG00000020160	atxn2	86	89.964	Cyprinodon_variegatus
ENSNBRG00000015794	atxn2	98	68.978	ENSDARG00000052897	atxn2	93	67.793	Danio_rerio
ENSNBRG00000015794	atxn2	99	59.832	ENSDNOG00000015696	ATXN2	99	60.129	Dasypus_novemcinctus
ENSNBRG00000015794	atxn2	99	55.023	ENSDORG00000000808	Atxn2	97	56.203	Dipodomys_ordii
ENSNBRG00000015794	atxn2	92	57.600	ENSETEG00000005224	ATXN2	74	58.167	Echinops_telfairi
ENSNBRG00000015794	atxn2	99	60.019	ENSEASG00005012077	ATXN2	99	60.364	Equus_asinus_asinus
ENSNBRG00000015794	atxn2	99	60.282	ENSECAG00000014347	ATXN2	78	61.459	Equus_caballus
ENSNBRG00000015794	atxn2	69	71.127	ENSEEUG00000014635	-	69	71.127	Erinaceus_europaeus
ENSNBRG00000015794	atxn2	99	69.034	ENSELUG00000019632	atxn2	91	71.883	Esox_lucius
ENSNBRG00000015794	atxn2	99	59.774	ENSFCAG00000003178	ATXN2	99	60.019	Felis_catus
ENSNBRG00000015794	atxn2	99	59.159	ENSFALG00000009001	ATXN2	99	60.298	Ficedula_albicollis
ENSNBRG00000015794	atxn2	99	60.297	ENSFDAG00000020942	ATXN2	97	61.510	Fukomys_damarensis
ENSNBRG00000015794	atxn2	89	90.141	ENSFHEG00000019561	atxn2	92	90.141	Fundulus_heteroclitus
ENSNBRG00000015794	atxn2	91	82.703	ENSGMOG00000007412	atxn2	89	83.002	Gadus_morhua
ENSNBRG00000015794	atxn2	98	57.732	ENSGALG00000004625	ATXN2	99	57.871	Gallus_gallus
ENSNBRG00000015794	atxn2	94	92.115	ENSGAFG00000003302	atxn2	94	92.115	Gambusia_affinis
ENSNBRG00000015794	atxn2	99	83.616	ENSGACG00000006295	atxn2	98	83.835	Gasterosteus_aculeatus
ENSNBRG00000015794	atxn2	99	60.112	ENSGGOG00000002137	ATXN2	99	61.510	Gorilla_gorilla
ENSNBRG00000015794	atxn2	92	99.283	ENSHBUG00000002921	atxn2	94	99.283	Haplochromis_burtoni
ENSNBRG00000015794	atxn2	99	59.363	ENSHGLG00000009812	ATXN2	82	60.768	Heterocephalus_glaber_female
ENSNBRG00000015794	atxn2	99	60.353	ENSHGLG00100019351	ATXN2	97	61.660	Heterocephalus_glaber_male
ENSNBRG00000015794	atxn2	92	87.197	ENSHCOG00000005278	atxn2	91	87.197	Hippocampus_comes
ENSNBRG00000015794	atxn2	92	80.351	ENSIPUG00000016649	atxn2	93	80.351	Ictalurus_punctatus
ENSNBRG00000015794	atxn2	99	59.925	ENSSTOG00000000978	ATXN2	96	60.473	Ictidomys_tridecemlineatus
ENSNBRG00000015794	atxn2	93	91.901	ENSKMAG00000000980	atxn2	94	91.901	Kryptolebias_marmoratus
ENSNBRG00000015794	atxn2	57	82.886	ENSLBEG00000017484	atxn2	97	83.168	Labrus_bergylta
ENSNBRG00000015794	atxn2	99	61.887	ENSLACG00000012531	ATXN2	97	62.997	Latimeria_chalumnae
ENSNBRG00000015794	atxn2	99	69.734	ENSLOCG00000007880	atxn2	94	68.377	Lepisosteus_oculatus
ENSNBRG00000015794	atxn2	99	59.963	ENSLAFG00000007416	ATXN2	97	61.266	Loxodonta_africana
ENSNBRG00000015794	atxn2	99	60.205	ENSMFAG00000000374	ATXN2	99	60.636	Macaca_fascicularis
ENSNBRG00000015794	atxn2	99	60.298	ENSMMUG00000002226	ATXN2	99	61.510	Macaca_mulatta
ENSNBRG00000015794	atxn2	99	60.205	ENSMNEG00000035588	ATXN2	99	60.636	Macaca_nemestrina
ENSNBRG00000015794	atxn2	99	60.205	ENSMLEG00000024324	ATXN2	99	60.636	Mandrillus_leucophaeus
ENSNBRG00000015794	atxn2	92	99.283	ENSMZEG00005008476	atxn2	94	99.283	Maylandia_zebra
ENSNBRG00000015794	atxn2	99	60.278	ENSMGAG00000005288	ATXN2	97	61.931	Meleagris_gallopavo
ENSNBRG00000015794	atxn2	62	56.334	ENSMAUG00000008223	-	97	55.142	Mesocricetus_auratus
ENSNBRG00000015794	atxn2	99	60.485	ENSMICG00000013541	ATXN2	99	61.696	Microcebus_murinus
ENSNBRG00000015794	atxn2	86	58.842	ENSMOCG00000005219	Atxn2	96	60.086	Microtus_ochrogaster
ENSNBRG00000015794	atxn2	99	80.553	ENSMMOG00000013189	atxn2	99	80.479	Mola_mola
ENSNBRG00000015794	atxn2	99	60.353	ENSMODG00000012221	ATXN2	82	61.266	Monodelphis_domestica
ENSNBRG00000015794	atxn2	99	72.820	ENSMALG00000018529	atxn2	94	91.039	Monopterus_albus
ENSNBRG00000015794	atxn2	99	58.998	MGP_CAROLIEiJ_G0027692	Atxn2	92	59.796	Mus_caroli
ENSNBRG00000015794	atxn2	99	58.829	ENSMUSG00000042605	Atxn2	96	59.271	Mus_musculus
ENSNBRG00000015794	atxn2	87	68.687	MGP_PahariEiJ_G0024272	Atxn2	97	54.167	Mus_pahari
ENSNBRG00000015794	atxn2	99	58.960	MGP_SPRETEiJ_G0028690	Atxn2	96	59.422	Mus_spretus
ENSNBRG00000015794	atxn2	99	58.341	ENSMPUG00000002212	ATXN2	97	59.739	Mustela_putorius_furo
ENSNBRG00000015794	atxn2	99	59.422	ENSMLUG00000015559	ATXN2	97	60.728	Myotis_lucifugus
ENSNBRG00000015794	atxn2	99	60.205	ENSNLEG00000000484	ATXN2	99	60.636	Nomascus_leucogenys
ENSNBRG00000015794	atxn2	85	77.143	ENSMEUG00000012244	-	83	77.143	Notamacropus_eugenii
ENSNBRG00000015794	atxn2	99	56.983	ENSOPRG00000014599	ATXN2	98	58.287	Ochotona_princeps
ENSNBRG00000015794	atxn2	99	60.186	ENSODEG00000010798	ATXN2	99	61.080	Octodon_degus
ENSNBRG00000015794	atxn2	99	92.108	ENSONIG00000014521	atxn2	95	92.108	Oreochromis_niloticus
ENSNBRG00000015794	atxn2	87	58.737	ENSOANG00000004796	ATXN2	99	60.296	Ornithorhynchus_anatinus
ENSNBRG00000015794	atxn2	99	58.605	ENSOCUG00000002855	ATXN2	68	60.335	Oryctolagus_cuniculus
ENSNBRG00000015794	atxn2	93	87.674	ENSORLG00000003606	atxn2	95	71.773	Oryzias_latipes
ENSNBRG00000015794	atxn2	93	88.732	ENSOMEG00000020080	atxn2	94	88.732	Oryzias_melastigma
ENSNBRG00000015794	atxn2	99	60.205	ENSOGAG00000000609	ATXN2	80	61.603	Otolemur_garnettii
ENSNBRG00000015794	atxn2	99	60.075	ENSOARG00000018223	ATXN2	97	61.474	Ovis_aries
ENSNBRG00000015794	atxn2	99	60.149	ENSPPAG00000028043	ATXN2	99	61.359	Pan_paniscus
ENSNBRG00000015794	atxn2	99	59.404	ENSPPRG00000003573	ATXN2	99	60.113	Panthera_pardus
ENSNBRG00000015794	atxn2	99	59.311	ENSPTIG00000021122	ATXN2	99	61.417	Panthera_tigris_altaica
ENSNBRG00000015794	atxn2	99	60.205	ENSPTRG00000029540	ATXN2	99	61.417	Pan_troglodytes
ENSNBRG00000015794	atxn2	99	60.205	ENSPANG00000017168	ATXN2	99	60.636	Papio_anubis
ENSNBRG00000015794	atxn2	93	81.754	ENSPKIG00000023134	atxn2	94	81.754	Paramormyrops_kingsleyae
ENSNBRG00000015794	atxn2	99	60.556	ENSPSIG00000002353	-	97	62.140	Pelodiscus_sinensis
ENSNBRG00000015794	atxn2	99	76.859	ENSPMGG00000005074	atxn2	99	77.138	Periophthalmus_magnuspinnatus
ENSNBRG00000015794	atxn2	86	58.798	ENSPEMG00000015340	Atxn2	96	60.150	Peromyscus_maniculatus_bairdii
ENSNBRG00000015794	atxn2	83	55.208	ENSPMAG00000007157	atxn2	90	55.208	Petromyzon_marinus
ENSNBRG00000015794	atxn2	63	56.061	ENSPMAG00000004603	atxn2	66	56.061	Petromyzon_marinus
ENSNBRG00000015794	atxn2	64	56.170	ENSPCIG00000006165	-	99	58.706	Phascolarctos_cinereus
ENSNBRG00000015794	atxn2	94	91.039	ENSPLAG00000015241	atxn2	94	91.039	Poecilia_latipinna
ENSNBRG00000015794	atxn2	95	91.039	ENSPMEG00000016681	atxn2	94	91.039	Poecilia_mexicana
ENSNBRG00000015794	atxn2	95	89.789	ENSPREG00000014825	atxn2	94	89.789	Poecilia_reticulata
ENSNBRG00000015794	atxn2	99	60.205	ENSPPYG00000004963	ATXN2	83	61.323	Pongo_abelii
ENSNBRG00000015794	atxn2	98	59.887	ENSPCOG00000022031	ATXN2	99	61.187	Propithecus_coquereli
ENSNBRG00000015794	atxn2	91	72.183	ENSPVAG00000013179	ATXN2	74	72.535	Pteropus_vampyrus
ENSNBRG00000015794	atxn2	58	87.542	ENSPNYG00000016981	atxn2	100	87.542	Pundamilia_nyererei
ENSNBRG00000015794	atxn2	92	83.929	ENSPNAG00000010889	atxn2	93	83.929	Pygocentrus_nattereri
ENSNBRG00000015794	atxn2	99	58.480	ENSRNOG00000001256	Atxn2	96	59.944	Rattus_norvegicus
ENSNBRG00000015794	atxn2	99	58.636	ENSRBIG00000039212	ATXN2	99	59.925	Rhinopithecus_bieti
ENSNBRG00000015794	atxn2	99	60.019	ENSRROG00000031170	ATXN2	99	60.455	Rhinopithecus_roxellana
ENSNBRG00000015794	atxn2	99	59.582	ENSSBOG00000031563	ATXN2	99	60.672	Saimiri_boliviensis_boliviensis
ENSNBRG00000015794	atxn2	99	59.007	ENSSHAG00000007304	ATXN2	97	60.184	Sarcophilus_harrisii
ENSNBRG00000015794	atxn2	99	66.919	ENSSFOG00015017229	atxn2	99	64.672	Scleropages_formosus
ENSNBRG00000015794	atxn2	99	85.261	ENSSMAG00000004627	atxn2	94	91.579	Scophthalmus_maximus
ENSNBRG00000015794	atxn2	93	94.982	ENSSDUG00000001223	atxn2	92	94.982	Seriola_dumerili
ENSNBRG00000015794	atxn2	99	81.964	ENSSLDG00000019837	atxn2	99	81.051	Seriola_lalandi_dorsalis
ENSNBRG00000015794	atxn2	73	69.683	ENSSARG00000006291	ATXN2	68	69.683	Sorex_araneus
ENSNBRG00000015794	atxn2	99	59.430	ENSSPUG00000010317	ATXN2	91	60.906	Sphenodon_punctatus
ENSNBRG00000015794	atxn2	93	95.341	ENSSPAG00000000377	atxn2	93	95.341	Stegastes_partitus
ENSNBRG00000015794	atxn2	99	59.256	ENSSSCG00000009834	ATXN2	91	60.728	Sus_scrofa
ENSNBRG00000015794	atxn2	99	80.093	ENSTRUG00000016801	atxn2	94	86.667	Takifugu_rubripes
ENSNBRG00000015794	atxn2	87	71.560	ENSTBEG00000001985	ATXN2	83	71.560	Tupaia_belangeri
ENSNBRG00000015794	atxn2	90	64.407	ENSTTRG00000000952	ATXN2	74	64.165	Tursiops_truncatus
ENSNBRG00000015794	atxn2	99	59.273	ENSUAMG00000025295	ATXN2	91	61.044	Ursus_americanus
ENSNBRG00000015794	atxn2	99	59.812	ENSUMAG00000007315	ATXN2	99	61.044	Ursus_maritimus
ENSNBRG00000015794	atxn2	91	64.167	ENSVPAG00000005940	ATXN2	90	61.033	Vicugna_pacos
ENSNBRG00000015794	atxn2	99	59.739	ENSVVUG00000016107	ATXN2	99	61.137	Vulpes_vulpes
ENSNBRG00000015794	atxn2	99	56.865	ENSXETG00000020912	atxn2	98	58.071	Xenopus_tropicalis
ENSNBRG00000015794	atxn2	56	78.930	ENSXCOG00000010001	atxn2	98	79.766	Xiphophorus_couchianus