EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000015816 (Gene tree)
Gene ID: 102781713
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3B subunit 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 15821 bases
Position: chrJH422420.1:578229-594049
Accession: 102781713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020612	SF3b1	PF08920.10	1.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021169	-	3846	XM_006805817	ENSNBRP00000020612	1281 (aa)	XP_006805880	-

Gene Model

Click here to download ENSNBRG00000015816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015816	sf3b1	100	89.109	ENSG00000115524	SF3B1	94	97.788	Homo_sapiens
ENSNBRG00000015816	sf3b1	100	93.009	ENSAPOG00000011894	sf3b1	100	93.009	Acanthochromis_polyacanthus
ENSNBRG00000015816	sf3b1	99	89.119	ENSAMEG00000013809	SF3B1	99	89.119	Ailuropoda_melanoleuca
ENSNBRG00000015816	sf3b1	100	94.419	ENSACIG00000020910	sf3b1	97	94.351	Amphilophus_citrinellus
ENSNBRG00000015816	sf3b1	100	93.009	ENSAOCG00000004478	sf3b1	100	93.009	Amphiprion_ocellaris
ENSNBRG00000015816	sf3b1	100	93.009	ENSAPEG00000012937	sf3b1	100	93.009	Amphiprion_percula
ENSNBRG00000015816	sf3b1	100	92.928	ENSATEG00000020435	sf3b1	100	92.928	Anabas_testudineus
ENSNBRG00000015816	sf3b1	99	89.094	ENSAPLG00000003993	SF3B1	99	89.094	Anas_platyrhynchos
ENSNBRG00000015816	sf3b1	100	88.796	ENSACAG00000009612	SF3B1	100	88.796	Anolis_carolinensis
ENSNBRG00000015816	sf3b1	100	89.109	ENSANAG00000021577	SF3B1	100	94.502	Aotus_nancymaae
ENSNBRG00000015816	sf3b1	100	94.673	ENSACLG00000023470	sf3b1	100	94.673	Astatotilapia_calliptera
ENSNBRG00000015816	sf3b1	100	91.572	ENSAMXG00000002219	sf3b1	100	91.572	Astyanax_mexicanus
ENSNBRG00000015816	sf3b1	100	89.109	ENSBTAG00000008915	SF3B1	100	89.109	Bos_taurus
ENSNBRG00000015816	sf3b1	91	68.257	WBGene00011605	sftb-1	89	68.503	Caenorhabditis_elegans
ENSNBRG00000015816	sf3b1	100	89.109	ENSCJAG00000003902	SF3B1	100	89.109	Callithrix_jacchus
ENSNBRG00000015816	sf3b1	100	89.109	ENSCAFG00000010826	SF3B1	100	89.109	Canis_familiaris
ENSNBRG00000015816	sf3b1	100	89.109	ENSCAFG00020004750	SF3B1	100	89.109	Canis_lupus_dingo
ENSNBRG00000015816	sf3b1	100	89.109	ENSCHIG00000015226	SF3B1	100	89.109	Capra_hircus
ENSNBRG00000015816	sf3b1	100	89.033	ENSTSYG00000009214	SF3B1	100	89.033	Carlito_syrichta
ENSNBRG00000015816	sf3b1	99	88.923	ENSCAPG00000006547	SF3B1	99	88.923	Cavia_aperea
ENSNBRG00000015816	sf3b1	99	89.025	ENSCPOG00000009353	SF3B1	100	89.025	Cavia_porcellus
ENSNBRG00000015816	sf3b1	100	89.109	ENSCCAG00000020506	SF3B1	100	89.109	Cebus_capucinus
ENSNBRG00000015816	sf3b1	100	89.109	ENSCATG00000035735	SF3B1	100	89.109	Cercocebus_atys
ENSNBRG00000015816	sf3b1	99	89.034	ENSCLAG00000014767	SF3B1	99	89.034	Chinchilla_lanigera
ENSNBRG00000015816	sf3b1	100	89.109	ENSCSAG00000011505	SF3B1	100	89.109	Chlorocebus_sabaeus
ENSNBRG00000015816	sf3b1	78	91.676	ENSCHOG00000009860	SF3B1	76	91.676	Choloepus_hoffmanni
ENSNBRG00000015816	sf3b1	100	89.092	ENSCPBG00000021902	SF3B1	99	94.208	Chrysemys_picta_bellii
ENSNBRG00000015816	sf3b1	64	79.881	ENSCING00000002558	-	92	79.976	Ciona_intestinalis
ENSNBRG00000015816	sf3b1	99	77.492	ENSCSAVG00000002559	-	99	77.492	Ciona_savignyi
ENSNBRG00000015816	sf3b1	100	89.109	ENSCANG00000029415	SF3B1	100	89.109	Colobus_angolensis_palliatus
ENSNBRG00000015816	sf3b1	100	89.109	ENSCGRG00001016990	Sf3b1	100	89.109	Cricetulus_griseus_chok1gshd
ENSNBRG00000015816	sf3b1	100	89.109	ENSCGRG00000005301	Sf3b1	100	89.109	Cricetulus_griseus_crigri
ENSNBRG00000015816	sf3b1	100	88.863	ENSCSEG00000003860	sf3b1	100	88.863	Cynoglossus_semilaevis
ENSNBRG00000015816	sf3b1	96	92.326	ENSCVAG00000003680	sf3b1	99	92.259	Cyprinodon_variegatus
ENSNBRG00000015816	sf3b1	100	90.426	ENSDARG00000056138	sf3b1	100	90.364	Danio_rerio
ENSNBRG00000015816	sf3b1	100	89.193	ENSDNOG00000011754	SF3B1	100	89.193	Dasypus_novemcinctus
ENSNBRG00000015816	sf3b1	99	90.195	ENSDORG00000002399	Sf3b1	100	90.195	Dipodomys_ordii
ENSNBRG00000015816	sf3b1	100	74.265	FBgn0031266	Sf3b1	100	74.265	Drosophila_melanogaster
ENSNBRG00000015816	sf3b1	82	87.109	ENSETEG00000009188	SF3B1	100	87.109	Echinops_telfairi
ENSNBRG00000015816	sf3b1	99	82.635	ENSEBUG00000004325	sf3b1	100	88.601	Eptatretus_burgeri
ENSNBRG00000015816	sf3b1	100	89.109	ENSEASG00005020159	SF3B1	98	89.109	Equus_asinus_asinus
ENSNBRG00000015816	sf3b1	100	89.109	ENSECAG00000021657	SF3B1	98	89.109	Equus_caballus
ENSNBRG00000015816	sf3b1	81	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSNBRG00000015816	sf3b1	100	90.491	ENSELUG00000005977	sf3b1	98	90.566	Esox_lucius
ENSNBRG00000015816	sf3b1	100	89.109	ENSFCAG00000005038	SF3B1	100	89.109	Felis_catus
ENSNBRG00000015816	sf3b1	99	89.171	ENSFALG00000004281	SF3B1	99	89.171	Ficedula_albicollis
ENSNBRG00000015816	sf3b1	100	89.109	ENSFDAG00000017510	SF3B1	100	89.109	Fukomys_damarensis
ENSNBRG00000015816	sf3b1	100	92.167	ENSFHEG00000014333	sf3b1	100	92.167	Fundulus_heteroclitus
ENSNBRG00000015816	sf3b1	100	91.172	ENSGMOG00000006773	sf3b1	100	91.172	Gadus_morhua
ENSNBRG00000015816	sf3b1	100	89.169	ENSGALG00000008038	SF3B1	100	89.169	Gallus_gallus
ENSNBRG00000015816	sf3b1	100	90.854	ENSGAFG00000000704	sf3b1	100	92.450	Gambusia_affinis
ENSNBRG00000015816	sf3b1	100	91.698	ENSGACG00000008839	sf3b1	100	91.698	Gasterosteus_aculeatus
ENSNBRG00000015816	sf3b1	100	88.485	ENSGAGG00000017478	SF3B1	100	88.485	Gopherus_agassizii
ENSNBRG00000015816	sf3b1	99	83.883	ENSGGOG00000009264	SF3B1	99	83.883	Gorilla_gorilla
ENSNBRG00000015816	sf3b1	99	94.669	ENSHBUG00000007705	sf3b1	100	94.669	Haplochromis_burtoni
ENSNBRG00000015816	sf3b1	99	89.034	ENSHGLG00000008285	-	99	89.034	Heterocephalus_glaber_female
ENSNBRG00000015816	sf3b1	99	87.040	ENSHGLG00100005535	-	99	87.040	Heterocephalus_glaber_male
ENSNBRG00000015816	sf3b1	100	91.459	ENSHCOG00000016775	sf3b1	100	91.534	Hippocampus_comes
ENSNBRG00000015816	sf3b1	100	91.413	ENSIPUG00000013171	sf3b1	100	91.413	Ictalurus_punctatus
ENSNBRG00000015816	sf3b1	100	89.799	ENSSTOG00000011034	SF3B1	100	89.799	Ictidomys_tridecemlineatus
ENSNBRG00000015816	sf3b1	99	88.992	ENSJJAG00000010903	Sf3b1	99	88.992	Jaculus_jaculus
ENSNBRG00000015816	sf3b1	100	92.191	ENSKMAG00000004009	sf3b1	100	92.191	Kryptolebias_marmoratus
ENSNBRG00000015816	sf3b1	100	92.372	ENSLBEG00000022208	sf3b1	100	92.372	Labrus_bergylta
ENSNBRG00000015816	sf3b1	99	86.052	ENSLACG00000014832	SF3B1	99	86.052	Latimeria_chalumnae
ENSNBRG00000015816	sf3b1	100	90.212	ENSLOCG00000003899	sf3b1	100	90.212	Lepisosteus_oculatus
ENSNBRG00000015816	sf3b1	100	89.109	ENSLAFG00000001956	SF3B1	100	89.109	Loxodonta_africana
ENSNBRG00000015816	sf3b1	99	89.034	ENSMMUG00000022430	SF3B1	99	89.034	Macaca_mulatta
ENSNBRG00000015816	sf3b1	100	89.109	ENSMNEG00000042333	SF3B1	100	94.502	Macaca_nemestrina
ENSNBRG00000015816	sf3b1	91	88.370	ENSMLEG00000026141	SF3B1	93	89.012	Mandrillus_leucophaeus
ENSNBRG00000015816	sf3b1	100	92.624	ENSMAMG00000010241	sf3b1	100	92.559	Mastacembelus_armatus
ENSNBRG00000015816	sf3b1	100	94.673	ENSMZEG00005021254	sf3b1	100	94.673	Maylandia_zebra
ENSNBRG00000015816	sf3b1	99	88.556	ENSMGAG00000007017	SF3B1	99	88.556	Meleagris_gallopavo
ENSNBRG00000015816	sf3b1	99	84.816	ENSMAUG00000009071	Sf3b1	99	84.816	Mesocricetus_auratus
ENSNBRG00000015816	sf3b1	100	89.109	ENSMICG00000013879	SF3B1	100	89.109	Microcebus_murinus
ENSNBRG00000015816	sf3b1	99	84.598	ENSMOCG00000000455	Sf3b1	99	84.598	Microtus_ochrogaster
ENSNBRG00000015816	sf3b1	83	91.606	ENSMMOG00000000475	sf3b1	100	91.606	Mola_mola
ENSNBRG00000015816	sf3b1	100	88.643	ENSMODG00000012275	SF3B1	100	88.643	Monodelphis_domestica
ENSNBRG00000015816	sf3b1	100	92.548	ENSMALG00000017211	sf3b1	100	92.483	Monopterus_albus
ENSNBRG00000015816	sf3b1	100	89.109	MGP_CAROLIEiJ_G0014141	Sf3b1	100	89.109	Mus_caroli
ENSNBRG00000015816	sf3b1	100	89.109	ENSMUSG00000025982	Sf3b1	100	89.109	Mus_musculus
ENSNBRG00000015816	sf3b1	100	89.109	MGP_SPRETEiJ_G0014947	Sf3b1	100	89.109	Mus_spretus
ENSNBRG00000015816	sf3b1	100	89.109	ENSMPUG00000007799	SF3B1	100	89.109	Mustela_putorius_furo
ENSNBRG00000015816	sf3b1	100	87.966	ENSMLUG00000000840	SF3B1	100	87.966	Myotis_lucifugus
ENSNBRG00000015816	sf3b1	99	88.770	ENSNGAG00000021884	-	100	88.770	Nannospalax_galili
ENSNBRG00000015816	sf3b1	100	89.109	ENSNLEG00000006861	SF3B1	100	89.109	Nomascus_leucogenys
ENSNBRG00000015816	sf3b1	60	99.717	ENSMEUG00000015848	-	61	99.717	Notamacropus_eugenii
ENSNBRG00000015816	sf3b1	100	77.467	ENSOPRG00000008596	SF3B1	100	77.541	Ochotona_princeps
ENSNBRG00000015816	sf3b1	100	89.109	ENSODEG00000011153	-	100	89.109	Octodon_degus
ENSNBRG00000015816	sf3b1	100	94.673	ENSONIG00000013758	sf3b1	100	94.673	Oreochromis_niloticus
ENSNBRG00000015816	sf3b1	84	95.387	ENSOCUG00000012722	-	96	95.387	Oryctolagus_cuniculus
ENSNBRG00000015816	sf3b1	100	92.395	ENSORLG00000020219	sf3b1	100	92.331	Oryzias_latipes
ENSNBRG00000015816	sf3b1	100	92.395	ENSORLG00020001746	sf3b1	100	92.331	Oryzias_latipes_hni
ENSNBRG00000015816	sf3b1	63	88.452	ENSORLG00015001759	sf3b1	98	88.452	Oryzias_latipes_hsok
ENSNBRG00000015816	sf3b1	100	92.629	ENSOMEG00000019231	sf3b1	100	92.564	Oryzias_melastigma
ENSNBRG00000015816	sf3b1	100	89.109	ENSOARG00000015374	SF3B1	100	89.109	Ovis_aries
ENSNBRG00000015816	sf3b1	100	89.109	ENSPPAG00000035007	SF3B1	100	89.109	Pan_paniscus
ENSNBRG00000015816	sf3b1	100	89.109	ENSPPRG00000009090	SF3B1	100	89.109	Panthera_pardus
ENSNBRG00000015816	sf3b1	100	89.109	ENSPTIG00000021557	SF3B1	100	89.109	Panthera_tigris_altaica
ENSNBRG00000015816	sf3b1	99	81.714	ENSPTRG00000012771	SF3B1	99	81.714	Pan_troglodytes
ENSNBRG00000015816	sf3b1	100	89.109	ENSPANG00000013417	SF3B1	100	89.109	Papio_anubis
ENSNBRG00000015816	sf3b1	99	90.625	ENSPKIG00000000784	sf3b1	99	90.625	Paramormyrops_kingsleyae
ENSNBRG00000015816	sf3b1	99	87.932	ENSPSIG00000017222	SF3B1	98	87.932	Pelodiscus_sinensis
ENSNBRG00000015816	sf3b1	90	91.751	ENSPMGG00000004330	sf3b1	99	91.604	Periophthalmus_magnuspinnatus
ENSNBRG00000015816	sf3b1	99	89.034	ENSPEMG00000010699	Sf3b1	100	89.034	Peromyscus_maniculatus_bairdii
ENSNBRG00000015816	sf3b1	99	85.898	ENSPMAG00000001311	sf3b1	99	86.202	Petromyzon_marinus
ENSNBRG00000015816	sf3b1	100	88.720	ENSPCIG00000010642	SF3B1	100	88.720	Phascolarctos_cinereus
ENSNBRG00000015816	sf3b1	100	92.559	ENSPFOG00000000073	sf3b1	100	92.494	Poecilia_formosa
ENSNBRG00000015816	sf3b1	100	92.553	ENSPLAG00000002293	sf3b1	100	92.489	Poecilia_latipinna
ENSNBRG00000015816	sf3b1	100	92.553	ENSPMEG00000000446	sf3b1	98	92.489	Poecilia_mexicana
ENSNBRG00000015816	sf3b1	100	92.629	ENSPREG00000019652	sf3b1	100	92.564	Poecilia_reticulata
ENSNBRG00000015816	sf3b1	91	94.485	ENSPPYG00000013044	SF3B1	100	94.485	Pongo_abelii
ENSNBRG00000015816	sf3b1	100	88.957	ENSPCAG00000009292	SF3B1	100	88.957	Procavia_capensis
ENSNBRG00000015816	sf3b1	100	89.109	ENSPCOG00000024074	SF3B1	100	89.109	Propithecus_coquereli
ENSNBRG00000015816	sf3b1	100	89.109	ENSPVAG00000008302	SF3B1	100	89.109	Pteropus_vampyrus
ENSNBRG00000015816	sf3b1	100	94.597	ENSPNYG00000014939	sf3b1	100	94.597	Pundamilia_nyererei
ENSNBRG00000015816	sf3b1	100	91.344	ENSPNAG00000008288	sf3b1	100	91.344	Pygocentrus_nattereri
ENSNBRG00000015816	sf3b1	100	89.109	ENSRNOG00000013516	Sf3b1	100	89.109	Rattus_norvegicus
ENSNBRG00000015816	sf3b1	99	85.355	ENSRBIG00000026096	SF3B1	100	85.355	Rhinopithecus_bieti
ENSNBRG00000015816	sf3b1	100	89.109	ENSRROG00000031308	SF3B1	100	89.109	Rhinopithecus_roxellana
ENSNBRG00000015816	sf3b1	100	89.109	ENSSBOG00000020080	SF3B1	100	89.109	Saimiri_boliviensis_boliviensis
ENSNBRG00000015816	sf3b1	100	88.643	ENSSHAG00000017564	SF3B1	100	88.643	Sarcophilus_harrisii
ENSNBRG00000015816	sf3b1	100	90.653	ENSSFOG00015021535	sf3b1	100	90.653	Scleropages_formosus
ENSNBRG00000015816	sf3b1	99	91.964	ENSSMAG00000013977	sf3b1	99	91.900	Scophthalmus_maximus
ENSNBRG00000015816	sf3b1	100	92.776	ENSSDUG00000017422	sf3b1	100	92.711	Seriola_dumerili
ENSNBRG00000015816	sf3b1	100	92.700	ENSSLDG00000019495	sf3b1	100	92.635	Seriola_lalandi_dorsalis
ENSNBRG00000015816	sf3b1	72	98.768	ENSSARG00000007016	SF3B1	71	98.768	Sorex_araneus
ENSNBRG00000015816	sf3b1	100	88.863	ENSSPUG00000000410	SF3B1	100	88.863	Sphenodon_punctatus
ENSNBRG00000015816	sf3b1	100	93.156	ENSSPAG00000010451	sf3b1	99	93.090	Stegastes_partitus
ENSNBRG00000015816	sf3b1	91	94.502	ENSSSCG00000016075	SF3B1	100	94.502	Sus_scrofa
ENSNBRG00000015816	sf3b1	100	89.169	ENSTGUG00000010553	SF3B1	100	89.169	Taeniopygia_guttata
ENSNBRG00000015816	sf3b1	100	91.939	ENSTRUG00000015534	sf3b1	100	91.939	Takifugu_rubripes
ENSNBRG00000015816	sf3b1	83	96.384	ENSTBEG00000008714	SF3B1	90	96.384	Tupaia_belangeri
ENSNBRG00000015816	sf3b1	92	93.300	ENSTTRG00000003414	SF3B1	92	93.300	Tursiops_truncatus
ENSNBRG00000015816	sf3b1	94	80.251	ENSUAMG00000018506	SF3B1	99	97.773	Ursus_americanus
ENSNBRG00000015816	sf3b1	100	89.109	ENSUMAG00000020945	SF3B1	100	89.109	Ursus_maritimus
ENSNBRG00000015816	sf3b1	95	92.683	ENSVPAG00000005798	SF3B1	96	92.683	Vicugna_pacos
ENSNBRG00000015816	sf3b1	100	89.109	ENSVVUG00000025948	SF3B1	95	89.109	Vulpes_vulpes
ENSNBRG00000015816	sf3b1	100	87.805	ENSXETG00000013339	sf3b1	100	87.805	Xenopus_tropicalis
ENSNBRG00000015816	sf3b1	100	88.415	ENSXCOG00000018086	sf3b1	100	88.661	Xiphophorus_couchianus
ENSNBRG00000015816	sf3b1	100	92.477	ENSXMAG00000007369	sf3b1	100	92.413	Xiphophorus_maculatus