EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000015885 (Gene tree)
Gene ID: 102777662
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 20241 bases
Position: chrJH422317.1:1563186-1583426
Accession: 102777662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020665	KH_1	PF00013.29	4.6e-40	1	2
ENSNBRP00000020665	KH_1	PF00013.29	4.6e-40	2	2
ENSNBRP00000020665	KH_2	PF07650.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021224	-	1287	XM_006796364	ENSNBRP00000020665	428 (aa)	XP_006796427	-

Gene Model

Click here to download ENSNBRG00000015885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000015885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000015885	-	74	54.810	ENSNBRG00000023314	pcbp2	98	57.099
ENSNBRG00000015885	-	75	58.284	ENSNBRG00000016714	-	97	58.284
ENSNBRG00000015885	-	97	63.946	ENSNBRG00000007475	pcbp4	99	63.946
ENSNBRG00000015885	-	99	52.620	ENSNBRG00000017646	zgc:110045	99	52.412
ENSNBRG00000015885	-	71	61.801	ENSNBRG00000016409	-	92	61.801
ENSNBRG00000015885	-	70	31.452	ENSNBRG00000016140	igf2bp2b	55	31.452
ENSNBRG00000015885	-	74	55.786	ENSNBRG00000003872	PCBP2	98	55.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000015885	-	98	53.812	ENSG00000090097	PCBP4	97	63.804	Homo_sapiens
ENSNBRG00000015885	-	51	87.500	ENSAPOG00000018462	-	67	87.500	Acanthochromis_polyacanthus
ENSNBRG00000015885	-	100	93.049	ENSAPOG00000009897	-	98	93.049	Acanthochromis_polyacanthus
ENSNBRG00000015885	-	97	54.233	ENSAMEG00000009211	PCBP4	97	54.462	Ailuropoda_melanoleuca
ENSNBRG00000015885	-	94	74.232	ENSACIG00000015264	pcbp4	94	73.529	Amphilophus_citrinellus
ENSNBRG00000015885	-	94	99.502	ENSACIG00000020434	-	97	99.502	Amphilophus_citrinellus
ENSNBRG00000015885	-	100	97.196	ENSAOCG00000021366	-	100	97.196	Amphiprion_ocellaris
ENSNBRG00000015885	-	90	65.306	ENSAOCG00000006924	-	100	64.962	Amphiprion_ocellaris
ENSNBRG00000015885	-	76	94.054	ENSAPEG00000009555	-	88	94.054	Amphiprion_percula
ENSNBRG00000015885	-	94	76.214	ENSAPEG00000023157	pcbp4	99	76.942	Amphiprion_percula
ENSNBRG00000015885	-	100	93.607	ENSATEG00000006511	-	100	93.607	Anabas_testudineus
ENSNBRG00000015885	-	94	70.244	ENSATEG00000008529	pcbp4	93	70.460	Anabas_testudineus
ENSNBRG00000015885	-	97	58.676	ENSACAG00000011701	PCBP4	97	57.991	Anolis_carolinensis
ENSNBRG00000015885	-	98	54.875	ENSANAG00000023072	PCBP4	99	54.875	Aotus_nancymaae
ENSNBRG00000015885	-	100	69.917	ENSACLG00000013348	pcbp4	96	70.124	Astatotilapia_calliptera
ENSNBRG00000015885	-	100	98.368	ENSACLG00000025246	-	100	98.368	Astatotilapia_calliptera
ENSNBRG00000015885	-	100	79.560	ENSAMXG00000033125	pcbp4	98	79.560	Astyanax_mexicanus
ENSNBRG00000015885	-	97	54.462	ENSBTAG00000018622	PCBP4	97	54.691	Bos_taurus
ENSNBRG00000015885	-	98	54.036	ENSCJAG00000005783	PCBP4	99	54.260	Callithrix_jacchus
ENSNBRG00000015885	-	97	54.233	ENSCAFG00000010019	PCBP4	97	54.462	Canis_familiaris
ENSNBRG00000015885	-	97	54.233	ENSCAFG00020022361	PCBP4	97	54.462	Canis_lupus_dingo
ENSNBRG00000015885	-	97	54.839	ENSCHIG00000012918	PCBP4	97	55.300	Capra_hircus
ENSNBRG00000015885	-	97	55.324	ENSTSYG00000008765	PCBP4	97	55.556	Carlito_syrichta
ENSNBRG00000015885	-	97	54.233	ENSCAPG00000005895	PCBP4	97	54.233	Cavia_aperea
ENSNBRG00000015885	-	97	54.233	ENSCPOG00000014617	PCBP4	97	54.462	Cavia_porcellus
ENSNBRG00000015885	-	98	54.139	ENSCCAG00000033268	PCBP4	99	54.586	Cebus_capucinus
ENSNBRG00000015885	-	98	54.505	ENSCATG00000032034	PCBP4	99	54.730	Cercocebus_atys
ENSNBRG00000015885	-	97	54.713	ENSCLAG00000008356	PCBP4	97	54.943	Chinchilla_lanigera
ENSNBRG00000015885	-	98	54.036	ENSCSAG00000013913	PCBP4	99	54.260	Chlorocebus_sabaeus
ENSNBRG00000015885	-	97	57.991	ENSCPBG00000016554	PCBP4	95	57.763	Chrysemys_picta_bellii
ENSNBRG00000015885	-	98	54.505	ENSCANG00000038865	PCBP4	99	54.730	Colobus_angolensis_palliatus
ENSNBRG00000015885	-	97	55.478	ENSCGRG00001014953	Pcbp4	97	55.944	Cricetulus_griseus_chok1gshd
ENSNBRG00000015885	-	97	55.478	ENSCGRG00000008617	Pcbp4	97	55.944	Cricetulus_griseus_crigri
ENSNBRG00000015885	-	100	86.728	ENSCSEG00000021041	PCBP4	100	86.499	Cynoglossus_semilaevis
ENSNBRG00000015885	-	100	65.971	ENSCSEG00000014487	pcbp4	95	66.736	Cynoglossus_semilaevis
ENSNBRG00000015885	-	100	91.781	ENSCVAG00000013090	-	100	91.355	Cyprinodon_variegatus
ENSNBRG00000015885	-	94	68.496	ENSCVAG00000003674	pcbp4	95	67.689	Cyprinodon_variegatus
ENSNBRG00000015885	-	100	78.194	ENSDARG00000024276	pcbp4	100	77.652	Danio_rerio
ENSNBRG00000015885	-	94	54.167	ENSDNOG00000033951	PCBP4	87	50.602	Dasypus_novemcinctus
ENSNBRG00000015885	-	97	53.776	ENSDORG00000000573	Pcbp4	97	54.233	Dipodomys_ordii
ENSNBRG00000015885	-	67	56.592	ENSETEG00000001778	PCBP4	96	56.592	Echinops_telfairi
ENSNBRG00000015885	-	97	54.005	ENSEASG00005012889	PCBP4	97	54.462	Equus_asinus_asinus
ENSNBRG00000015885	-	97	54.005	ENSECAG00000024218	PCBP4	97	54.462	Equus_caballus
ENSNBRG00000015885	-	100	72.258	ENSELUG00000018204	pcbp4	98	72.688	Esox_lucius
ENSNBRG00000015885	-	100	83.186	ENSELUG00000001870	-	98	82.080	Esox_lucius
ENSNBRG00000015885	-	97	54.233	ENSFCAG00000009148	PCBP4	97	54.462	Felis_catus
ENSNBRG00000015885	-	96	54.186	ENSFALG00000008831	PCBP4	95	54.419	Ficedula_albicollis
ENSNBRG00000015885	-	97	54.358	ENSFDAG00000012692	PCBP4	99	53.846	Fukomys_damarensis
ENSNBRG00000015885	-	94	70.149	ENSFHEG00000002769	-	97	70.149	Fundulus_heteroclitus
ENSNBRG00000015885	-	100	83.705	ENSGMOG00000017799	-	100	83.036	Gadus_morhua
ENSNBRG00000015885	-	97	54.338	ENSGALG00000027695	PCBP4	97	54.795	Gallus_gallus
ENSNBRG00000015885	-	82	88.556	ENSGAFG00000021090	-	76	90.730	Gambusia_affinis
ENSNBRG00000015885	-	100	86.384	ENSGACG00000002664	-	100	87.054	Gasterosteus_aculeatus
ENSNBRG00000015885	-	97	58.219	ENSGAGG00000022116	PCBP4	95	57.991	Gopherus_agassizii
ENSNBRG00000015885	-	98	53.812	ENSGGOG00000012474	PCBP4	99	54.260	Gorilla_gorilla
ENSNBRG00000015885	-	100	69.710	ENSHBUG00000009472	pcbp4	96	69.917	Haplochromis_burtoni
ENSNBRG00000015885	-	100	98.135	ENSHBUG00000005329	-	100	98.135	Haplochromis_burtoni
ENSNBRG00000015885	-	97	54.795	ENSHGLG00000012018	PCBP4	97	54.795	Heterocephalus_glaber_female
ENSNBRG00000015885	-	97	54.545	ENSHGLG00100008748	PCBP4	97	54.545	Heterocephalus_glaber_male
ENSNBRG00000015885	-	100	83.669	ENSHCOG00000010838	-	92	98.026	Hippocampus_comes
ENSNBRG00000015885	-	100	79.733	ENSIPUG00000008212	pcbp4	98	79.733	Ictalurus_punctatus
ENSNBRG00000015885	-	97	55.478	ENSSTOG00000002573	PCBP4	97	55.711	Ictidomys_tridecemlineatus
ENSNBRG00000015885	-	97	55.478	ENSJJAG00000016235	Pcbp4	97	55.944	Jaculus_jaculus
ENSNBRG00000015885	-	100	90.807	ENSKMAG00000017554	-	98	90.807	Kryptolebias_marmoratus
ENSNBRG00000015885	-	100	71.368	ENSKMAG00000014252	pcbp4	96	71.581	Kryptolebias_marmoratus
ENSNBRG00000015885	-	100	93.807	ENSLBEG00000011345	-	100	93.807	Labrus_bergylta
ENSNBRG00000015885	-	99	62.838	ENSLACG00000015899	PCBP4	90	73.684	Latimeria_chalumnae
ENSNBRG00000015885	-	100	76.786	ENSLOCG00000013402	pcbp4	98	76.786	Lepisosteus_oculatus
ENSNBRG00000015885	-	94	55.941	ENSLAFG00000010732	PCBP4	99	56.436	Loxodonta_africana
ENSNBRG00000015885	-	98	54.505	ENSMFAG00000001431	PCBP4	99	54.730	Macaca_fascicularis
ENSNBRG00000015885	-	98	54.505	ENSMMUG00000022205	PCBP4	99	54.730	Macaca_mulatta
ENSNBRG00000015885	-	98	54.505	ENSMNEG00000028553	PCBP4	99	54.730	Macaca_nemestrina
ENSNBRG00000015885	-	98	54.505	ENSMLEG00000027083	PCBP4	99	54.730	Mandrillus_leucophaeus
ENSNBRG00000015885	-	100	71.002	ENSMAMG00000010163	pcbp4	95	71.215	Mastacembelus_armatus
ENSNBRG00000015885	-	100	94.989	ENSMAMG00000011364	-	100	94.989	Mastacembelus_armatus
ENSNBRG00000015885	-	100	69.917	ENSMZEG00005008852	pcbp4	94	75.355	Maylandia_zebra
ENSNBRG00000015885	-	100	99.766	ENSMZEG00005023631	-	100	99.766	Maylandia_zebra
ENSNBRG00000015885	-	52	64.516	ENSMGAG00000005091	-	85	64.516	Meleagris_gallopavo
ENSNBRG00000015885	-	68	53.488	ENSMGAG00000003895	-	99	53.488	Meleagris_gallopavo
ENSNBRG00000015885	-	97	54.795	ENSMAUG00000021064	Pcbp4	97	54.795	Mesocricetus_auratus
ENSNBRG00000015885	-	97	54.566	ENSMICG00000002686	PCBP4	97	54.795	Microcebus_murinus
ENSNBRG00000015885	-	97	54.920	ENSMOCG00000013557	Pcbp4	97	55.149	Microtus_ochrogaster
ENSNBRG00000015885	-	100	91.837	ENSMMOG00000020533	-	100	91.837	Mola_mola
ENSNBRG00000015885	-	70	62.701	ENSMMOG00000017756	pcbp4	92	62.701	Mola_mola
ENSNBRG00000015885	-	97	54.691	ENSMODG00000011790	PCBP4	82	54.005	Monodelphis_domestica
ENSNBRG00000015885	-	92	95.685	ENSMALG00000022117	-	100	95.418	Monopterus_albus
ENSNBRG00000015885	-	91	74.155	ENSMALG00000020318	pcbp4	87	75.061	Monopterus_albus
ENSNBRG00000015885	-	97	54.462	MGP_CAROLIEiJ_G0032623	Pcbp4	93	65.761	Mus_caroli
ENSNBRG00000015885	-	97	54.462	ENSMUSG00000023495	Pcbp4	93	65.761	Mus_musculus
ENSNBRG00000015885	-	97	54.462	MGP_PahariEiJ_G0015491	Pcbp4	93	65.761	Mus_pahari
ENSNBRG00000015885	-	97	54.462	MGP_SPRETEiJ_G0033768	-	93	65.761	Mus_spretus
ENSNBRG00000015885	-	97	54.233	ENSMPUG00000011766	PCBP4	97	54.462	Mustela_putorius_furo
ENSNBRG00000015885	-	97	54.462	ENSNGAG00000013148	Pcbp4	99	54.570	Nannospalax_galili
ENSNBRG00000015885	-	98	54.505	ENSNLEG00000007064	PCBP4	99	54.730	Nomascus_leucogenys
ENSNBRG00000015885	-	96	48.352	ENSMEUG00000006917	PCBP4	97	47.903	Notamacropus_eugenii
ENSNBRG00000015885	-	94	51.584	ENSOPRG00000008763	PCBP4	97	51.584	Ochotona_princeps
ENSNBRG00000015885	-	97	54.338	ENSODEG00000018230	PCBP4	97	54.566	Octodon_degus
ENSNBRG00000015885	-	97	53.899	ENSOANG00000014110	PCBP4	94	53.670	Ornithorhynchus_anatinus
ENSNBRG00000015885	-	97	54.691	ENSOCUG00000025336	PCBP4	97	54.691	Oryctolagus_cuniculus
ENSNBRG00000015885	-	100	68.000	ENSORLG00000003061	pcbp4	96	68.842	Oryzias_latipes
ENSNBRG00000015885	-	100	92.325	ENSORLG00000009899	-	100	92.325	Oryzias_latipes
ENSNBRG00000015885	-	100	91.704	ENSORLG00020001183	-	100	90.090	Oryzias_latipes_hni
ENSNBRG00000015885	-	100	67.015	ENSORLG00015019262	pcbp4	96	67.641	Oryzias_latipes_hsok
ENSNBRG00000015885	-	100	92.152	ENSORLG00015017819	-	98	92.152	Oryzias_latipes_hsok
ENSNBRG00000015885	-	100	92.377	ENSOMEG00000011545	-	98	92.377	Oryzias_melastigma
ENSNBRG00000015885	-	100	66.098	ENSOMEG00000003516	-	100	66.200	Oryzias_melastigma
ENSNBRG00000015885	-	97	54.233	ENSOGAG00000032384	PCBP4	97	54.462	Otolemur_garnettii
ENSNBRG00000015885	-	94	55.941	ENSOARG00000006603	PCBP4	98	56.436	Ovis_aries
ENSNBRG00000015885	-	98	53.587	ENSPPAG00000038764	PCBP4	99	53.812	Pan_paniscus
ENSNBRG00000015885	-	97	54.233	ENSPPRG00000006165	PCBP4	97	54.462	Panthera_pardus
ENSNBRG00000015885	-	97	54.233	ENSPTIG00000005401	PCBP4	93	54.462	Panthera_tigris_altaica
ENSNBRG00000015885	-	98	53.812	ENSPTRG00000014983	PCBP4	99	54.036	Pan_troglodytes
ENSNBRG00000015885	-	98	54.505	ENSPANG00000026222	PCBP4	99	54.730	Papio_anubis
ENSNBRG00000015885	-	100	71.365	ENSPKIG00000005487	-	98	70.917	Paramormyrops_kingsleyae
ENSNBRG00000015885	-	100	79.866	ENSPKIG00000010244	pcbp4	100	80.841	Paramormyrops_kingsleyae
ENSNBRG00000015885	-	80	55.827	ENSPSIG00000011286	PCBP4	96	55.046	Pelodiscus_sinensis
ENSNBRG00000015885	-	100	85.388	ENSPMGG00000022732	-	100	85.845	Periophthalmus_magnuspinnatus
ENSNBRG00000015885	-	94	73.775	ENSPMGG00000000063	pcbp4	96	73.775	Periophthalmus_magnuspinnatus
ENSNBRG00000015885	-	97	55.046	ENSPEMG00000009276	Pcbp4	97	55.046	Peromyscus_maniculatus_bairdii
ENSNBRG00000015885	-	97	55.149	ENSPCIG00000018151	PCBP4	93	54.691	Phascolarctos_cinereus
ENSNBRG00000015885	-	97	66.964	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSNBRG00000015885	-	100	90.807	ENSPFOG00000002989	-	98	90.807	Poecilia_formosa
ENSNBRG00000015885	-	85	69.713	ENSPLAG00000023316	pcbp4	89	71.279	Poecilia_latipinna
ENSNBRG00000015885	-	95	64.569	ENSPLAG00000011438	-	98	64.569	Poecilia_latipinna
ENSNBRG00000015885	-	64	61.433	ENSPMEG00000012990	pcbp4	100	63.087	Poecilia_mexicana
ENSNBRG00000015885	-	100	89.486	ENSPREG00000017370	-	100	89.486	Poecilia_reticulata
ENSNBRG00000015885	-	64	59.058	ENSPREG00000021498	-	75	59.058	Poecilia_reticulata
ENSNBRG00000015885	-	98	54.036	ENSPPYG00000013822	PCBP4	99	54.260	Pongo_abelii
ENSNBRG00000015885	-	94	52.403	ENSPCAG00000009515	PCBP4	97	52.184	Procavia_capensis
ENSNBRG00000015885	-	97	54.462	ENSPCOG00000027535	PCBP4	97	54.920	Propithecus_coquereli
ENSNBRG00000015885	-	94	49.670	ENSPVAG00000012474	PCBP4	97	49.011	Pteropus_vampyrus
ENSNBRG00000015885	-	100	99.533	ENSPNYG00000003098	-	100	99.533	Pundamilia_nyererei
ENSNBRG00000015885	-	94	75.118	ENSPNYG00000019234	pcbp4	95	75.118	Pundamilia_nyererei
ENSNBRG00000015885	-	100	79.956	ENSPNAG00000025434	pcbp4	98	79.956	Pygocentrus_nattereri
ENSNBRG00000015885	-	97	54.462	ENSRNOG00000012406	Pcbp4	97	54.920	Rattus_norvegicus
ENSNBRG00000015885	-	98	54.505	ENSRBIG00000043793	PCBP4	99	54.730	Rhinopithecus_bieti
ENSNBRG00000015885	-	98	54.505	ENSRROG00000034589	PCBP4	99	54.730	Rhinopithecus_roxellana
ENSNBRG00000015885	-	98	54.139	ENSSBOG00000027029	PCBP4	99	54.586	Saimiri_boliviensis_boliviensis
ENSNBRG00000015885	-	69	55.462	ENSSHAG00000007362	PCBP4	90	55.462	Sarcophilus_harrisii
ENSNBRG00000015885	-	100	70.824	ENSSFOG00015012075	PCBP4	98	70.379	Scleropages_formosus
ENSNBRG00000015885	-	75	83.442	ENSSFOG00015008221	pcbp4	60	83.442	Scleropages_formosus
ENSNBRG00000015885	-	100	93.256	ENSSMAG00000009392	-	100	93.256	Scophthalmus_maximus
ENSNBRG00000015885	-	100	70.316	ENSSMAG00000005827	pcbp4	94	71.308	Scophthalmus_maximus
ENSNBRG00000015885	-	94	76.998	ENSSDUG00000017719	pcbp4	97	77.724	Seriola_dumerili
ENSNBRG00000015885	-	100	97.664	ENSSDUG00000015540	-	100	97.664	Seriola_dumerili
ENSNBRG00000015885	-	100	97.664	ENSSLDG00000007851	-	100	97.664	Seriola_lalandi_dorsalis
ENSNBRG00000015885	-	97	54.147	ENSSPUG00000000194	PCBP4	97	54.147	Sphenodon_punctatus
ENSNBRG00000015885	-	100	93.049	ENSSPAG00000003033	-	100	92.757	Stegastes_partitus
ENSNBRG00000015885	-	86	63.990	ENSSPAG00000019058	-	92	64.249	Stegastes_partitus
ENSNBRG00000015885	-	97	54.233	ENSSSCG00000028446	PCBP4	97	54.691	Sus_scrofa
ENSNBRG00000015885	-	71	52.941	ENSTGUG00000006393	PCBP4	96	52.941	Taeniopygia_guttata
ENSNBRG00000015885	-	100	93.240	ENSTRUG00000007426	-	100	93.240	Takifugu_rubripes
ENSNBRG00000015885	-	100	82.287	ENSTNIG00000017887	-	99	81.390	Tetraodon_nigroviridis
ENSNBRG00000015885	-	85	39.409	ENSTBEG00000015770	PCBP4	100	39.409	Tupaia_belangeri
ENSNBRG00000015885	-	75	53.968	ENSTTRG00000001443	PCBP4	84	53.968	Tursiops_truncatus
ENSNBRG00000015885	-	98	50.569	ENSUAMG00000020871	PCBP4	100	54.692	Ursus_americanus
ENSNBRG00000015885	-	88	55.224	ENSUMAG00000021609	PCBP4	90	55.198	Ursus_maritimus
ENSNBRG00000015885	-	97	54.233	ENSVVUG00000026857	PCBP4	97	54.462	Vulpes_vulpes
ENSNBRG00000015885	-	87	84.636	ENSXCOG00000000111	-	100	84.636	Xiphophorus_couchianus
ENSNBRG00000015885	-	90	67.488	ENSXMAG00000022188	-	90	68.966	Xiphophorus_maculatus
ENSNBRG00000015885	-	79	77.437	ENSXMAG00000015709	pcbp4	75	77.437	Xiphophorus_maculatus
ENSNBRG00000015885	-	100	90.807	ENSXMAG00000024530	-	98	90.807	Xiphophorus_maculatus