EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016032 (Gene tree)
Gene ID: 102775950
Gene Symbol: patz1
Alias: -
Full Name: POZ-%2C AT hook-%2C and zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9137 bases
Position: chrJH422277.1:10607642-10616778
Accession: 102775950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000020910	zf-C2H2	PF00096.26	2.4e-30	1	5
ENSNBRP00000020910	zf-C2H2	PF00096.26	2.4e-30	2	5
ENSNBRP00000020910	zf-C2H2	PF00096.26	2.4e-30	3	5
ENSNBRP00000020910	zf-C2H2	PF00096.26	2.4e-30	4	5
ENSNBRP00000020910	zf-C2H2	PF00096.26	2.4e-30	5	5
ENSNBRP00000020905	zf-C2H2	PF00096.26	5e-30	1	5
ENSNBRP00000020905	zf-C2H2	PF00096.26	5e-30	2	5
ENSNBRP00000020905	zf-C2H2	PF00096.26	5e-30	3	5
ENSNBRP00000020905	zf-C2H2	PF00096.26	5e-30	4	5
ENSNBRP00000020905	zf-C2H2	PF00096.26	5e-30	5	5
ENSNBRP00000020905	zf-met	PF12874.7	2e-06	1	1
ENSNBRP00000020910	zf-met	PF12874.7	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021475	-	1992	XM_006783076	ENSNBRP00000020910	663 (aa)	XP_006783139	-
ENSNBRT00000021468	-	2154	-	ENSNBRP00000020905	717 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016032	patz1	71	35.928	ENSNBRG00000021237	-	92	31.980
ENSNBRG00000016032	patz1	59	32.727	ENSNBRG00000018449	PRDM15	53	32.727
ENSNBRG00000016032	patz1	63	32.400	ENSNBRG00000016169	-	69	35.268
ENSNBRG00000016032	patz1	71	32.065	ENSNBRG00000011170	zbtb16a	65	30.374
ENSNBRG00000016032	patz1	66	31.658	ENSNBRG00000008123	-	79	36.527
ENSNBRG00000016032	patz1	53	34.884	ENSNBRG00000003250	-	94	34.884
ENSNBRG00000016032	patz1	51	36.905	ENSNBRG00000024354	-	95	36.567
ENSNBRG00000016032	patz1	65	32.090	ENSNBRG00000020159	znf526	71	32.090
ENSNBRG00000016032	patz1	61	33.714	ENSNBRG00000005823	-	84	33.714
ENSNBRG00000016032	patz1	51	35.897	ENSNBRG00000015873	-	92	40.909
ENSNBRG00000016032	patz1	50	37.879	ENSNBRG00000024048	-	84	35.185
ENSNBRG00000016032	patz1	63	39.773	ENSNBRG00000003124	-	95	36.869
ENSNBRG00000016032	patz1	52	36.161	ENSNBRG00000000960	-	98	36.275
ENSNBRG00000016032	patz1	53	31.193	ENSNBRG00000013983	scrt1b	93	31.193
ENSNBRG00000016032	patz1	66	39.394	ENSNBRG00000014088	-	99	36.765
ENSNBRG00000016032	patz1	63	31.472	ENSNBRG00000019481	-	91	35.652
ENSNBRG00000016032	patz1	53	31.282	ENSNBRG00000015442	ZNF319	86	31.282
ENSNBRG00000016032	patz1	53	32.394	ENSNBRG00000008106	-	91	32.794
ENSNBRG00000016032	patz1	52	37.952	ENSNBRG00000000321	-	99	35.484
ENSNBRG00000016032	patz1	51	33.149	ENSNBRG00000024179	-	59	37.572
ENSNBRG00000016032	patz1	52	33.333	ENSNBRG00000016603	-	84	33.333
ENSNBRG00000016032	patz1	52	34.211	ENSNBRG00000001163	-	94	33.333
ENSNBRG00000016032	patz1	55	33.149	ENSNBRG00000001641	-	79	33.149
ENSNBRG00000016032	patz1	61	34.247	ENSNBRG00000010405	-	87	40.000
ENSNBRG00000016032	patz1	65	35.185	ENSNBRG00000009075	znf236	81	30.899
ENSNBRG00000016032	patz1	52	36.681	ENSNBRG00000024345	-	88	39.759
ENSNBRG00000016032	patz1	61	43.114	ENSNBRG00000024344	-	72	43.114
ENSNBRG00000016032	patz1	58	30.631	ENSNBRG00000009815	-	88	31.439
ENSNBRG00000016032	patz1	56	37.500	ENSNBRG00000000492	-	97	37.500
ENSNBRG00000016032	patz1	63	37.725	ENSNBRG00000002902	-	98	37.725
ENSNBRG00000016032	patz1	87	32.353	ENSNBRG00000021111	zbtb16b	85	32.353
ENSNBRG00000016032	patz1	52	34.118	ENSNBRG00000019770	-	87	42.056
ENSNBRG00000016032	patz1	64	34.940	ENSNBRG00000006125	-	94	35.498
ENSNBRG00000016032	patz1	58	36.047	ENSNBRG00000021247	-	96	36.047
ENSNBRG00000016032	patz1	62	32.231	ENSNBRG00000016666	-	96	38.554
ENSNBRG00000016032	patz1	64	30.918	ENSNBRG00000016577	si:dkey-182i3.9	88	35.204
ENSNBRG00000016032	patz1	51	35.204	ENSNBRG00000005796	-	99	35.204
ENSNBRG00000016032	patz1	63	37.634	ENSNBRG00000016282	-	92	38.938
ENSNBRG00000016032	patz1	51	36.207	ENSNBRG00000015652	-	88	33.668
ENSNBRG00000016032	patz1	50	32.883	ENSNBRG00000004822	-	55	34.270
ENSNBRG00000016032	patz1	56	32.576	ENSNBRG00000003990	bcl6ab	53	32.609
ENSNBRG00000016032	patz1	52	30.357	ENSNBRG00000008223	-	89	36.957
ENSNBRG00000016032	patz1	53	37.647	ENSNBRG00000006411	-	87	37.647
ENSNBRG00000016032	patz1	64	34.211	ENSNBRG00000004523	-	91	34.211
ENSNBRG00000016032	patz1	50	31.690	ENSNBRG00000004381	-	77	40.678
ENSNBRG00000016032	patz1	68	31.214	ENSNBRG00000009279	-	89	33.730
ENSNBRG00000016032	patz1	50	35.503	ENSNBRG00000007602	-	81	35.503
ENSNBRG00000016032	patz1	63	31.600	ENSNBRG00000024066	-	97	35.450
ENSNBRG00000016032	patz1	50	36.508	ENSNBRG00000001608	-	94	36.508
ENSNBRG00000016032	patz1	63	31.276	ENSNBRG00000021967	-	71	31.276
ENSNBRG00000016032	patz1	60	34.078	ENSNBRG00000016550	-	84	38.462
ENSNBRG00000016032	patz1	66	33.453	ENSNBRG00000000523	-	68	35.979
ENSNBRG00000016032	patz1	52	36.364	ENSNBRG00000007335	zbtb24	64	32.335
ENSNBRG00000016032	patz1	63	32.558	ENSNBRG00000008827	znf319b	90	32.275
ENSNBRG00000016032	patz1	53	38.636	ENSNBRG00000016234	-	68	38.636
ENSNBRG00000016032	patz1	50	33.482	ENSNBRG00000024014	-	56	33.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016032	patz1	100	59.768	ENSG00000100105	PATZ1	100	60.039	Homo_sapiens
ENSNBRG00000016032	patz1	100	89.308	ENSAPOG00000018447	patz1	100	83.983	Acanthochromis_polyacanthus
ENSNBRG00000016032	patz1	100	58.708	ENSAMEG00000007074	PATZ1	100	58.708	Ailuropoda_melanoleuca
ENSNBRG00000016032	patz1	100	97.071	ENSACIG00000016779	patz1	100	97.071	Amphilophus_citrinellus
ENSNBRG00000016032	patz1	100	90.176	ENSAPEG00000013354	patz1	100	90.176	Amphiprion_percula
ENSNBRG00000016032	patz1	100	92.664	ENSATEG00000011260	patz1	100	88.138	Anabas_testudineus
ENSNBRG00000016032	patz1	88	58.292	ENSAPLG00000003934	PATZ1	99	58.292	Anas_platyrhynchos
ENSNBRG00000016032	patz1	100	59.768	ENSANAG00000029603	PATZ1	100	60.039	Aotus_nancymaae
ENSNBRG00000016032	patz1	99	89.116	ENSAMXG00000002273	patz1	100	69.366	Astyanax_mexicanus
ENSNBRG00000016032	patz1	100	59.768	ENSBTAG00000005478	PATZ1	100	60.039	Bos_taurus
ENSNBRG00000016032	patz1	100	59.768	ENSCJAG00000010978	PATZ1	100	60.039	Callithrix_jacchus
ENSNBRG00000016032	patz1	100	59.768	ENSCAFG00000013087	PATZ1	99	60.039	Canis_familiaris
ENSNBRG00000016032	patz1	100	59.768	ENSCHIG00000020203	PATZ1	100	60.039	Capra_hircus
ENSNBRG00000016032	patz1	100	59.768	ENSTSYG00000033183	PATZ1	100	60.039	Carlito_syrichta
ENSNBRG00000016032	patz1	100	59.768	ENSCCAG00000028772	PATZ1	100	60.039	Cebus_capucinus
ENSNBRG00000016032	patz1	100	59.768	ENSCATG00000006101	PATZ1	100	59.768	Cercocebus_atys
ENSNBRG00000016032	patz1	100	57.865	ENSCPBG00000011277	PATZ1	100	57.865	Chrysemys_picta_bellii
ENSNBRG00000016032	patz1	100	59.768	ENSCANG00000024972	PATZ1	100	59.768	Colobus_angolensis_palliatus
ENSNBRG00000016032	patz1	100	57.103	ENSCGRG00001004071	Patz1	100	57.103	Cricetulus_griseus_chok1gshd
ENSNBRG00000016032	patz1	94	57.928	ENSCGRG00000004814	Patz1	100	57.271	Cricetulus_griseus_crigri
ENSNBRG00000016032	patz1	100	77.443	ENSCSEG00000001385	patz1	100	77.586	Cynoglossus_semilaevis
ENSNBRG00000016032	patz1	100	80.725	ENSCVAG00000007684	patz1	100	84.167	Cyprinodon_variegatus
ENSNBRG00000016032	patz1	100	70.146	ENSDARG00000076584	patz1	100	70.146	Danio_rerio
ENSNBRG00000016032	patz1	89	58.307	ENSDNOG00000003183	PATZ1	100	58.307	Dasypus_novemcinctus
ENSNBRG00000016032	patz1	100	59.961	ENSDORG00000023834	Patz1	100	60.232	Dipodomys_ordii
ENSNBRG00000016032	patz1	100	59.768	ENSECAG00000025030	PATZ1	100	60.039	Equus_caballus
ENSNBRG00000016032	patz1	100	68.953	ENSELUG00000002333	patz1	100	74.449	Esox_lucius
ENSNBRG00000016032	patz1	100	59.768	ENSFCAG00000030253	PATZ1	100	60.039	Felis_catus
ENSNBRG00000016032	patz1	89	58.211	ENSFALG00000007450	PATZ1	100	58.211	Ficedula_albicollis
ENSNBRG00000016032	patz1	97	55.620	ENSFDAG00000005614	PATZ1	100	55.766	Fukomys_damarensis
ENSNBRG00000016032	patz1	100	76.835	ENSFHEG00000014755	patz1	100	87.000	Fundulus_heteroclitus
ENSNBRG00000016032	patz1	100	69.122	ENSGMOG00000001062	patz1	100	69.405	Gadus_morhua
ENSNBRG00000016032	patz1	100	57.639	ENSGALG00000006934	PATZ1	100	58.114	Gallus_gallus
ENSNBRG00000016032	patz1	100	82.828	ENSGAFG00000010053	patz1	100	82.828	Gambusia_affinis
ENSNBRG00000016032	patz1	88	58.581	ENSGAGG00000003214	PATZ1	100	58.581	Gopherus_agassizii
ENSNBRG00000016032	patz1	100	59.768	ENSGGOG00000017171	PATZ1	100	60.039	Gorilla_gorilla
ENSNBRG00000016032	patz1	100	76.626	ENSHCOG00000017644	patz1	99	76.115	Hippocampus_comes
ENSNBRG00000016032	patz1	100	67.833	ENSIPUG00000017653	patz1	99	67.833	Ictalurus_punctatus
ENSNBRG00000016032	patz1	100	59.574	ENSSTOG00000020707	PATZ1	100	59.846	Ictidomys_tridecemlineatus
ENSNBRG00000016032	patz1	100	58.969	ENSJJAG00000015259	Patz1	99	59.117	Jaculus_jaculus
ENSNBRG00000016032	patz1	100	82.692	ENSKMAG00000008157	patz1	99	85.321	Kryptolebias_marmoratus
ENSNBRG00000016032	patz1	100	59.456	ENSLAFG00000002317	PATZ1	100	59.456	Loxodonta_africana
ENSNBRG00000016032	patz1	100	59.961	ENSMFAG00000040968	PATZ1	100	59.961	Macaca_fascicularis
ENSNBRG00000016032	patz1	100	59.961	ENSMNEG00000037588	PATZ1	100	59.961	Macaca_nemestrina
ENSNBRG00000016032	patz1	100	59.768	ENSMLEG00000030938	PATZ1	100	59.768	Mandrillus_leucophaeus
ENSNBRG00000016032	patz1	100	85.977	ENSMAMG00000023652	patz1	100	85.977	Mastacembelus_armatus
ENSNBRG00000016032	patz1	88	55.574	ENSMGAG00000008439	PATZ1	100	55.574	Meleagris_gallopavo
ENSNBRG00000016032	patz1	100	59.574	ENSMAUG00000004129	Patz1	100	59.574	Mesocricetus_auratus
ENSNBRG00000016032	patz1	100	59.768	ENSMICG00000005430	PATZ1	100	60.039	Microcebus_murinus
ENSNBRG00000016032	patz1	100	58.368	ENSMOCG00000014488	Patz1	100	58.368	Microtus_ochrogaster
ENSNBRG00000016032	patz1	100	83.288	ENSMMOG00000021679	patz1	100	83.288	Mola_mola
ENSNBRG00000016032	patz1	100	88.606	ENSMALG00000021172	patz1	100	88.606	Monopterus_albus
ENSNBRG00000016032	patz1	100	59.961	MGP_CAROLIEiJ_G0016007	Patz1	100	60.232	Mus_caroli
ENSNBRG00000016032	patz1	100	59.961	ENSMUSG00000020453	Patz1	100	60.232	Mus_musculus
ENSNBRG00000016032	patz1	100	59.961	MGP_PahariEiJ_G0016884	Patz1	100	60.232	Mus_pahari
ENSNBRG00000016032	patz1	100	59.961	MGP_SPRETEiJ_G0016846	Patz1	100	60.232	Mus_spretus
ENSNBRG00000016032	patz1	100	59.846	ENSMLUG00000009942	PATZ1	100	59.768	Myotis_lucifugus
ENSNBRG00000016032	patz1	100	59.768	ENSNGAG00000010268	Patz1	100	60.039	Nannospalax_galili
ENSNBRG00000016032	patz1	77	61.176	ENSMEUG00000016293	PATZ1	97	59.322	Notamacropus_eugenii
ENSNBRG00000016032	patz1	100	59.768	ENSODEG00000003589	PATZ1	100	60.039	Octodon_degus
ENSNBRG00000016032	patz1	100	89.495	ENSONIG00000004248	patz1	100	89.193	Oreochromis_niloticus
ENSNBRG00000016032	patz1	100	59.406	ENSOANG00000014654	PATZ1	100	59.689	Ornithorhynchus_anatinus
ENSNBRG00000016032	patz1	100	80.709	ENSORLG00020010937	patz1	100	80.709	Oryzias_latipes_hni
ENSNBRG00000016032	patz1	100	80.939	ENSORLG00015007396	patz1	100	80.939	Oryzias_latipes_hsok
ENSNBRG00000016032	patz1	100	83.840	ENSOMEG00000006636	patz1	100	83.840	Oryzias_melastigma
ENSNBRG00000016032	patz1	100	58.650	ENSOGAG00000027905	PATZ1	100	58.989	Otolemur_garnettii
ENSNBRG00000016032	patz1	100	59.768	ENSPPAG00000033227	PATZ1	100	60.039	Pan_paniscus
ENSNBRG00000016032	patz1	100	59.768	ENSPPRG00000001573	PATZ1	100	60.039	Panthera_pardus
ENSNBRG00000016032	patz1	88	58.592	ENSPTIG00000007937	PATZ1	91	58.537	Panthera_tigris_altaica
ENSNBRG00000016032	patz1	100	59.768	ENSPTRG00000014268	PATZ1	100	60.039	Pan_troglodytes
ENSNBRG00000016032	patz1	100	59.768	ENSPANG00000006821	PATZ1	100	58.509	Papio_anubis
ENSNBRG00000016032	patz1	100	70.809	ENSPKIG00000019584	patz1	100	70.809	Paramormyrops_kingsleyae
ENSNBRG00000016032	patz1	56	60.982	ENSPSIG00000016553	-	85	60.982	Pelodiscus_sinensis
ENSNBRG00000016032	patz1	69	73.661	ENSPSIG00000011562	-	100	73.661	Pelodiscus_sinensis
ENSNBRG00000016032	patz1	100	78.394	ENSPMGG00000010196	patz1	100	78.394	Periophthalmus_magnuspinnatus
ENSNBRG00000016032	patz1	100	59.768	ENSPEMG00000005321	Patz1	100	59.768	Peromyscus_maniculatus_bairdii
ENSNBRG00000016032	patz1	100	83.434	ENSPLAG00000010425	patz1	100	83.434	Poecilia_latipinna
ENSNBRG00000016032	patz1	100	83.434	ENSPMEG00000000255	patz1	100	83.434	Poecilia_mexicana
ENSNBRG00000016032	patz1	100	82.665	ENSPREG00000002440	patz1	100	82.665	Poecilia_reticulata
ENSNBRG00000016032	patz1	100	58.368	ENSPPYG00000011732	PATZ1	100	58.708	Pongo_abelii
ENSNBRG00000016032	patz1	100	59.768	ENSPCOG00000019729	PATZ1	100	60.039	Propithecus_coquereli
ENSNBRG00000016032	patz1	100	58.509	ENSPVAG00000001749	PATZ1	100	58.708	Pteropus_vampyrus
ENSNBRG00000016032	patz1	100	96.765	ENSPNYG00000013542	patz1	100	96.765	Pundamilia_nyererei
ENSNBRG00000016032	patz1	88	63.867	ENSPNAG00000017222	patz1	100	63.867	Pygocentrus_nattereri
ENSNBRG00000016032	patz1	100	59.768	ENSRBIG00000044231	PATZ1	100	59.768	Rhinopithecus_bieti
ENSNBRG00000016032	patz1	100	59.768	ENSRROG00000037155	PATZ1	100	59.768	Rhinopithecus_roxellana
ENSNBRG00000016032	patz1	100	59.768	ENSSBOG00000003894	PATZ1	100	60.039	Saimiri_boliviensis_boliviensis
ENSNBRG00000016032	patz1	80	91.304	ENSSFOG00015013244	patz1	78	91.304	Scleropages_formosus
ENSNBRG00000016032	patz1	99	58.615	ENSSPUG00000015298	PATZ1	97	58.110	Sphenodon_punctatus
ENSNBRG00000016032	patz1	89	60.194	ENSSSCG00000010027	PATZ1	100	60.194	Sus_scrofa
ENSNBRG00000016032	patz1	100	84.892	ENSTRUG00000015366	patz1	100	84.892	Takifugu_rubripes
ENSNBRG00000016032	patz1	100	58.368	ENSTTRG00000010279	PATZ1	100	58.567	Tursiops_truncatus
ENSNBRG00000016032	patz1	100	59.768	ENSUAMG00000015014	PATZ1	100	60.039	Ursus_americanus
ENSNBRG00000016032	patz1	100	56.105	ENSXETG00000004190	patz1	100	56.997	Xenopus_tropicalis
ENSNBRG00000016032	patz1	100	83.030	ENSXMAG00000015531	patz1	100	83.030	Xiphophorus_maculatus