EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016294 (Gene tree)
Gene ID: 102777509
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: probable tRNA pseudouridine synthase 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4065 bases
Position: chrJH422277.1:10660243-10664307
Accession: 102777509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021265	TruB_N	PF01509.18	4.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021840	-	1867	XM_006783081	ENSNBRP00000021265	330 (aa)	XP_006783144	UPI0003EC05B0

Gene Model

Click here to download ENSNBRG00000016294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016294	trub2	54	30.939	ENSNBRG00000023393	trub1	72	30.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016294	trub2	84	54.480	ENSG00000167112	TRUB2	84	54.480	Homo_sapiens
ENSNBRG00000016294	trub2	57	69.841	ENSAPOG00000018216	-	90	69.841	Acanthochromis_polyacanthus
ENSNBRG00000016294	trub2	75	78.862	ENSAPOG00000015733	trub2	89	78.862	Acanthochromis_polyacanthus
ENSNBRG00000016294	trub2	78	85.714	ENSAPOG00000018284	-	95	85.714	Acanthochromis_polyacanthus
ENSNBRG00000016294	trub2	85	52.837	ENSAMEG00000015395	TRUB2	85	52.837	Ailuropoda_melanoleuca
ENSNBRG00000016294	trub2	100	86.667	ENSACIG00000016500	trub2	100	86.667	Amphilophus_citrinellus
ENSNBRG00000016294	trub2	99	81.459	ENSAOCG00000002330	trub2	96	81.459	Amphiprion_ocellaris
ENSNBRG00000016294	trub2	99	81.155	ENSAPEG00000013177	trub2	96	81.155	Amphiprion_percula
ENSNBRG00000016294	trub2	87	80.903	ENSATEG00000011371	trub2	91	80.903	Anabas_testudineus
ENSNBRG00000016294	trub2	83	50.714	ENSAPLG00000009254	TRUB2	89	51.071	Anas_platyrhynchos
ENSNBRG00000016294	trub2	85	53.381	ENSACAG00000007331	TRUB2	85	53.381	Anolis_carolinensis
ENSNBRG00000016294	trub2	84	55.036	ENSANAG00000036234	TRUB2	89	55.036	Aotus_nancymaae
ENSNBRG00000016294	trub2	100	96.970	ENSACLG00000010793	trub2	100	96.970	Astatotilapia_calliptera
ENSNBRG00000016294	trub2	98	58.716	ENSAMXG00000031679	trub2	92	58.716	Astyanax_mexicanus
ENSNBRG00000016294	trub2	84	55.197	ENSCJAG00000020009	TRUB2	84	55.197	Callithrix_jacchus
ENSNBRG00000016294	trub2	84	52.518	ENSCAFG00000020068	TRUB2	84	52.518	Canis_familiaris
ENSNBRG00000016294	trub2	52	49.708	ENSCAFG00020017325	-	96	49.708	Canis_lupus_dingo
ENSNBRG00000016294	trub2	84	54.839	ENSCHIG00000021160	TRUB2	84	54.839	Capra_hircus
ENSNBRG00000016294	trub2	84	54.317	ENSTSYG00000034163	TRUB2	84	54.317	Carlito_syrichta
ENSNBRG00000016294	trub2	75	56.225	ENSCAPG00000000223	TRUB2	89	52.817	Cavia_aperea
ENSNBRG00000016294	trub2	87	55.363	ENSCPOG00000013535	TRUB2	91	52.198	Cavia_porcellus
ENSNBRG00000016294	trub2	85	50.890	ENSCCAG00000028463	-	85	50.890	Cebus_capucinus
ENSNBRG00000016294	trub2	84	54.317	ENSCCAG00000026531	-	85	54.317	Cebus_capucinus
ENSNBRG00000016294	trub2	84	55.197	ENSCATG00000038234	TRUB2	84	55.197	Cercocebus_atys
ENSNBRG00000016294	trub2	84	54.839	ENSCLAG00000001702	TRUB2	87	53.488	Chinchilla_lanigera
ENSNBRG00000016294	trub2	84	52.143	ENSCSAG00000014117	TRUB2	84	52.143	Chlorocebus_sabaeus
ENSNBRG00000016294	trub2	84	52.158	ENSCHOG00000001555	TRUB2	84	52.158	Choloepus_hoffmanni
ENSNBRG00000016294	trub2	84	56.115	ENSCPBG00000025186	TRUB2	81	56.115	Chrysemys_picta_bellii
ENSNBRG00000016294	trub2	87	33.677	ENSCSAVG00000003930	-	89	33.677	Ciona_savignyi
ENSNBRG00000016294	trub2	84	49.104	ENSCANG00000016135	TRUB2	82	49.104	Colobus_angolensis_palliatus
ENSNBRG00000016294	trub2	84	52.158	ENSCGRG00001024441	Trub2	91	48.538	Cricetulus_griseus_chok1gshd
ENSNBRG00000016294	trub2	84	52.158	ENSCGRG00000005633	Trub2	84	52.158	Cricetulus_griseus_crigri
ENSNBRG00000016294	trub2	95	67.619	ENSCSEG00000001331	trub2	94	67.619	Cynoglossus_semilaevis
ENSNBRG00000016294	trub2	99	71.472	ENSCVAG00000009901	trub2	98	71.472	Cyprinodon_variegatus
ENSNBRG00000016294	trub2	99	59.146	ENSDARG00000028379	trub2	93	59.146	Danio_rerio
ENSNBRG00000016294	trub2	83	35.052	ENSDNOG00000043967	-	88	35.052	Dasypus_novemcinctus
ENSNBRG00000016294	trub2	84	53.237	ENSDNOG00000045679	-	83	53.237	Dasypus_novemcinctus
ENSNBRG00000016294	trub2	84	53.597	ENSDORG00000016222	Trub2	87	53.597	Dipodomys_ordii
ENSNBRG00000016294	trub2	86	32.168	FBgn0033060	CG7849	90	32.168	Drosophila_melanogaster
ENSNBRG00000016294	trub2	84	52.518	ENSETEG00000009114	TRUB2	86	52.518	Echinops_telfairi
ENSNBRG00000016294	trub2	67	47.619	ENSEBUG00000015723	trub2	81	47.619	Eptatretus_burgeri
ENSNBRG00000016294	trub2	84	52.878	ENSEASG00005016819	TRUB2	84	52.878	Equus_asinus_asinus
ENSNBRG00000016294	trub2	84	53.237	ENSECAG00000023520	TRUB2	84	53.237	Equus_caballus
ENSNBRG00000016294	trub2	84	52.878	ENSEEUG00000008908	TRUB2	84	52.878	Erinaceus_europaeus
ENSNBRG00000016294	trub2	90	63.344	ENSELUG00000002376	trub2	97	63.344	Esox_lucius
ENSNBRG00000016294	trub2	84	54.317	ENSFCAG00000005839	TRUB2	86	54.317	Felis_catus
ENSNBRG00000016294	trub2	76	52.000	ENSFALG00000001364	TRUB2	80	52.400	Ficedula_albicollis
ENSNBRG00000016294	trub2	84	54.480	ENSFDAG00000021374	TRUB2	88	52.326	Fukomys_damarensis
ENSNBRG00000016294	trub2	98	65.231	ENSFHEG00000014655	trub2	97	65.231	Fundulus_heteroclitus
ENSNBRG00000016294	trub2	90	60.067	ENSGMOG00000000981	trub2	100	60.067	Gadus_morhua
ENSNBRG00000016294	trub2	83	52.920	ENSGALG00000004920	TRUB2	67	52.920	Gallus_gallus
ENSNBRG00000016294	trub2	99	70.859	ENSGAFG00000010107	trub2	97	71.472	Gambusia_affinis
ENSNBRG00000016294	trub2	98	75.309	ENSGACG00000001476	trub2	98	75.309	Gasterosteus_aculeatus
ENSNBRG00000016294	trub2	84	55.596	ENSGAGG00000022872	TRUB2	82	55.596	Gopherus_agassizii
ENSNBRG00000016294	trub2	84	54.480	ENSGGOG00000014780	TRUB2	84	54.480	Gorilla_gorilla
ENSNBRG00000016294	trub2	100	97.273	ENSHBUG00000022384	trub2	100	97.273	Haplochromis_burtoni
ENSNBRG00000016294	trub2	84	54.122	ENSHGLG00000016715	TRUB2	84	54.122	Heterocephalus_glaber_female
ENSNBRG00000016294	trub2	84	54.122	ENSHGLG00100016548	TRUB2	84	54.122	Heterocephalus_glaber_male
ENSNBRG00000016294	trub2	98	74.154	ENSHCOG00000017748	trub2	99	74.154	Hippocampus_comes
ENSNBRG00000016294	trub2	97	57.321	ENSIPUG00000017725	hdhd3	56	57.321	Ictalurus_punctatus
ENSNBRG00000016294	trub2	84	54.480	ENSSTOG00000008024	-	88	51.163	Ictidomys_tridecemlineatus
ENSNBRG00000016294	trub2	84	54.480	ENSSTOG00000022617	-	84	54.480	Ictidomys_tridecemlineatus
ENSNBRG00000016294	trub2	84	46.763	ENSJJAG00000019181	Trub2	82	46.763	Jaculus_jaculus
ENSNBRG00000016294	trub2	99	73.556	ENSKMAG00000007861	trub2	98	73.556	Kryptolebias_marmoratus
ENSNBRG00000016294	trub2	96	77.287	ENSLBEG00000000907	trub2	94	77.287	Labrus_bergylta
ENSNBRG00000016294	trub2	87	52.941	ENSLACG00000001515	TRUB2	85	52.941	Latimeria_chalumnae
ENSNBRG00000016294	trub2	87	60.900	ENSLOCG00000000885	trub2	95	60.900	Lepisosteus_oculatus
ENSNBRG00000016294	trub2	84	53.237	ENSLAFG00000002174	TRUB2	91	53.237	Loxodonta_africana
ENSNBRG00000016294	trub2	84	54.839	ENSMFAG00000000881	TRUB2	84	54.839	Macaca_fascicularis
ENSNBRG00000016294	trub2	84	54.839	ENSMMUG00000014146	TRUB2	84	54.839	Macaca_mulatta
ENSNBRG00000016294	trub2	84	54.839	ENSMNEG00000011189	TRUB2	84	54.839	Macaca_nemestrina
ENSNBRG00000016294	trub2	84	54.839	ENSMLEG00000037270	TRUB2	84	54.839	Mandrillus_leucophaeus
ENSNBRG00000016294	trub2	89	80.339	ENSMAMG00000023643	trub2	98	80.339	Mastacembelus_armatus
ENSNBRG00000016294	trub2	100	97.273	ENSMZEG00005016018	trub2	100	97.273	Maylandia_zebra
ENSNBRG00000016294	trub2	55	55.738	ENSMGAG00000003894	TRUB2	92	55.738	Meleagris_gallopavo
ENSNBRG00000016294	trub2	84	53.237	ENSMAUG00000010403	Trub2	95	47.849	Mesocricetus_auratus
ENSNBRG00000016294	trub2	84	54.317	ENSMICG00000047032	TRUB2	84	54.317	Microcebus_murinus
ENSNBRG00000016294	trub2	84	53.237	ENSMOCG00000014291	Trub2	91	53.237	Microtus_ochrogaster
ENSNBRG00000016294	trub2	97	73.209	ENSMMOG00000021674	trub2	99	73.209	Mola_mola
ENSNBRG00000016294	trub2	85	52.500	ENSMODG00000005940	TRUB2	94	52.500	Monodelphis_domestica
ENSNBRG00000016294	trub2	99	76.807	ENSMALG00000021231	trub2	99	76.807	Monopterus_albus
ENSNBRG00000016294	trub2	84	52.688	MGP_CAROLIEiJ_G0023368	Trub2	95	47.594	Mus_caroli
ENSNBRG00000016294	trub2	84	51.799	ENSMUSG00000039826	Trub2	88	48.538	Mus_musculus
ENSNBRG00000016294	trub2	85	52.857	MGP_PahariEiJ_G0024826	Trub2	88	50.581	Mus_pahari
ENSNBRG00000016294	trub2	84	52.158	MGP_SPRETEiJ_G0024286	Trub2	95	46.774	Mus_spretus
ENSNBRG00000016294	trub2	85	51.773	ENSMPUG00000013206	TRUB2	77	51.773	Mustela_putorius_furo
ENSNBRG00000016294	trub2	85	53.763	ENSMLUG00000005256	TRUB2	84	53.763	Myotis_lucifugus
ENSNBRG00000016294	trub2	84	52.158	ENSNGAG00000018679	Trub2	84	52.158	Nannospalax_galili
ENSNBRG00000016294	trub2	84	54.480	ENSNLEG00000017556	TRUB2	84	54.480	Nomascus_leucogenys
ENSNBRG00000016294	trub2	84	54.676	ENSMEUG00000000484	TRUB2	89	54.676	Notamacropus_eugenii
ENSNBRG00000016294	trub2	95	46.082	ENSOPRG00000001981	TRUB2	96	46.082	Ochotona_princeps
ENSNBRG00000016294	trub2	84	54.317	ENSODEG00000017292	TRUB2	85	54.317	Octodon_degus
ENSNBRG00000016294	trub2	100	93.939	ENSONIG00000004230	trub2	100	93.939	Oreochromis_niloticus
ENSNBRG00000016294	trub2	57	49.206	ENSOANG00000029023	-	83	49.206	Ornithorhynchus_anatinus
ENSNBRG00000016294	trub2	84	52.158	ENSOCUG00000026296	TRUB2	76	52.158	Oryctolagus_cuniculus
ENSNBRG00000016294	trub2	98	67.073	ENSORLG00000020011	trub2	99	67.073	Oryzias_latipes
ENSNBRG00000016294	trub2	98	67.584	ENSORLG00020011028	trub2	95	67.890	Oryzias_latipes_hni
ENSNBRG00000016294	trub2	98	67.385	ENSORLG00015007494	trub2	96	68.615	Oryzias_latipes_hsok
ENSNBRG00000016294	trub2	99	72.699	ENSOMEG00000006702	trub2	99	72.699	Oryzias_melastigma
ENSNBRG00000016294	trub2	84	54.480	ENSOARG00000010579	-	84	54.480	Ovis_aries
ENSNBRG00000016294	trub2	59	54.872	ENSOARG00000003785	-	81	53.659	Ovis_aries
ENSNBRG00000016294	trub2	84	54.839	ENSPPAG00000043146	TRUB2	84	54.839	Pan_paniscus
ENSNBRG00000016294	trub2	84	54.317	ENSPPRG00000006307	TRUB2	86	54.317	Panthera_pardus
ENSNBRG00000016294	trub2	84	54.676	ENSPTIG00000012366	TRUB2	86	54.676	Panthera_tigris_altaica
ENSNBRG00000016294	trub2	84	54.480	ENSPTRG00000021423	TRUB2	84	54.480	Pan_troglodytes
ENSNBRG00000016294	trub2	84	54.480	ENSPTRG00000052151	-	84	54.480	Pan_troglodytes
ENSNBRG00000016294	trub2	84	54.839	ENSPANG00000025856	TRUB2	84	54.839	Papio_anubis
ENSNBRG00000016294	trub2	91	64.667	ENSPKIG00000019769	trub2	98	64.667	Paramormyrops_kingsleyae
ENSNBRG00000016294	trub2	84	51.613	ENSPSIG00000015701	TRUB2	92	51.613	Pelodiscus_sinensis
ENSNBRG00000016294	trub2	93	72.258	ENSPMGG00000010206	trub2	97	72.258	Periophthalmus_magnuspinnatus
ENSNBRG00000016294	trub2	84	53.047	ENSPEMG00000017893	Trub2	91	49.419	Peromyscus_maniculatus_bairdii
ENSNBRG00000016294	trub2	84	54.676	ENSPCIG00000026731	TRUB2	89	54.676	Phascolarctos_cinereus
ENSNBRG00000016294	trub2	96	72.812	ENSPFOG00000018018	trub2	84	72.414	Poecilia_formosa
ENSNBRG00000016294	trub2	96	73.125	ENSPLAG00000010484	trub2	91	72.727	Poecilia_latipinna
ENSNBRG00000016294	trub2	99	71.951	ENSPMEG00000012913	trub2	97	71.951	Poecilia_mexicana
ENSNBRG00000016294	trub2	98	71.865	ENSPREG00000002549	trub2	97	71.865	Poecilia_reticulata
ENSNBRG00000016294	trub2	84	54.122	ENSPPYG00000019650	TRUB2	85	54.122	Pongo_abelii
ENSNBRG00000016294	trub2	84	53.237	ENSPCAG00000015068	TRUB2	85	53.237	Procavia_capensis
ENSNBRG00000016294	trub2	84	54.676	ENSPCOG00000017100	TRUB2	84	54.676	Propithecus_coquereli
ENSNBRG00000016294	trub2	79	53.640	ENSPVAG00000001224	TRUB2	87	53.640	Pteropus_vampyrus
ENSNBRG00000016294	trub2	100	97.576	ENSPNYG00000013666	trub2	100	97.576	Pundamilia_nyererei
ENSNBRG00000016294	trub2	98	58.462	ENSPNAG00000017292	trub2	93	58.462	Pygocentrus_nattereri
ENSNBRG00000016294	trub2	84	53.405	ENSRNOG00000043189	Trub2	86	53.405	Rattus_norvegicus
ENSNBRG00000016294	trub2	85	49.822	ENSRBIG00000006965	TRUB2	83	49.822	Rhinopithecus_bieti
ENSNBRG00000016294	trub2	84	55.556	ENSRROG00000042928	TRUB2	84	55.556	Rhinopithecus_roxellana
ENSNBRG00000016294	trub2	84	53.957	ENSSBOG00000022439	TRUB2	84	53.957	Saimiri_boliviensis_boliviensis
ENSNBRG00000016294	trub2	89	63.946	ENSSFOG00015013391	trub2	94	63.946	Scleropages_formosus
ENSNBRG00000016294	trub2	100	72.121	ENSSMAG00000020820	trub2	100	72.121	Scophthalmus_maximus
ENSNBRG00000016294	trub2	99	77.676	ENSSDUG00000016928	trub2	98	77.676	Seriola_dumerili
ENSNBRG00000016294	trub2	99	77.676	ENSSLDG00000024701	trub2	98	77.676	Seriola_lalandi_dorsalis
ENSNBRG00000016294	trub2	85	51.971	ENSSPUG00000015515	TRUB2	83	51.971	Sphenodon_punctatus
ENSNBRG00000016294	trub2	99	77.508	ENSSPAG00000017865	trub2	98	77.508	Stegastes_partitus
ENSNBRG00000016294	trub2	84	52.878	ENSSSCG00000005645	TRUB2	84	52.610	Sus_scrofa
ENSNBRG00000016294	trub2	75	52.823	ENSTGUG00000003704	TRUB2	94	52.823	Taeniopygia_guttata
ENSNBRG00000016294	trub2	95	71.293	ENSTRUG00000015499	trub2	97	71.293	Takifugu_rubripes
ENSNBRG00000016294	trub2	88	74.658	ENSTNIG00000014721	trub2	100	74.658	Tetraodon_nigroviridis
ENSNBRG00000016294	trub2	54	52.247	ENSTBEG00000000586	TRUB2	79	52.247	Tupaia_belangeri
ENSNBRG00000016294	trub2	84	52.158	ENSTTRG00000016486	TRUB2	84	52.158	Tursiops_truncatus
ENSNBRG00000016294	trub2	85	52.482	ENSUAMG00000020276	TRUB2	83	52.482	Ursus_americanus
ENSNBRG00000016294	trub2	85	52.482	ENSUMAG00000022051	TRUB2	83	52.482	Ursus_maritimus
ENSNBRG00000016294	trub2	84	41.007	ENSVPAG00000005793	TRUB2	87	41.007	Vicugna_pacos
ENSNBRG00000016294	trub2	84	52.518	ENSVVUG00000013451	TRUB2	79	52.518	Vulpes_vulpes
ENSNBRG00000016294	trub2	87	54.828	ENSXETG00000003973	trub2	88	54.828	Xenopus_tropicalis
ENSNBRG00000016294	trub2	99	70.859	ENSXCOG00000008759	trub2	97	70.859	Xiphophorus_couchianus
ENSNBRG00000016294	trub2	99	70.552	ENSXMAG00000015478	trub2	97	70.552	Xiphophorus_maculatus