EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000016402 (Gene tree)
Gene ID: 102799714
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G patch domain-containing protein 8-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 28574 bases
Position: chrJH422328.1:2192941-2221514
Accession: 102799714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021367	zf-C2H2_jaz	PF12171.8	5.2e-06	1	1
ENSNBRP00000021367	G-patch	PF01585.23	8.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021945	-	7288	XM_006798204	ENSNBRP00000021367	1491 (aa)	XP_006798267	UPI0003EBECB9

Gene Model

Click here to download ENSNBRG00000016402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016402	gpatch8	100	89.558	ENSAPOG00000023938	gpatch8	100	89.491	Acanthochromis_polyacanthus
ENSNBRG00000016402	gpatch8	100	93.110	ENSACIG00000012241	gpatch8	100	93.311	Amphilophus_citrinellus
ENSNBRG00000016402	gpatch8	100	89.357	ENSAOCG00000018102	gpatch8	100	89.157	Amphiprion_ocellaris
ENSNBRG00000016402	gpatch8	100	89.424	ENSAPEG00000016776	gpatch8	100	89.224	Amphiprion_percula
ENSNBRG00000016402	gpatch8	100	85.207	ENSATEG00000003247	gpatch8	100	84.404	Anabas_testudineus
ENSNBRG00000016402	gpatch8	100	98.793	ENSACLG00000004165	gpatch8	100	98.793	Astatotilapia_calliptera
ENSNBRG00000016402	gpatch8	59	60.270	ENSAMXG00000041683	gpatch8	57	61.732	Astyanax_mexicanus
ENSNBRG00000016402	gpatch8	100	80.720	ENSCSEG00000021277	gpatch8	100	80.587	Cynoglossus_semilaevis
ENSNBRG00000016402	gpatch8	100	82.345	ENSCVAG00000013477	gpatch8	100	82.545	Cyprinodon_variegatus
ENSNBRG00000016402	gpatch8	100	63.867	ENSDARG00000059768	gpatch8	56	61.432	Danio_rerio
ENSNBRG00000016402	gpatch8	100	64.702	ENSELUG00000019920	gpatch8	57	64.082	Esox_lucius
ENSNBRG00000016402	gpatch8	56	73.063	ENSFHEG00000005791	gpatch8	100	80.692	Fundulus_heteroclitus
ENSNBRG00000016402	gpatch8	57	61.372	ENSGALG00000041556	GPATCH8	57	63.566	Gallus_gallus
ENSNBRG00000016402	gpatch8	100	82.388	ENSGAFG00000018138	gpatch8	100	81.988	Gambusia_affinis
ENSNBRG00000016402	gpatch8	100	98.929	ENSHBUG00000002669	gpatch8	100	98.929	Haplochromis_burtoni
ENSNBRG00000016402	gpatch8	73	57.983	ENSHGLG00100010738	GPATCH8	61	61.157	Heterocephalus_glaber_male
ENSNBRG00000016402	gpatch8	100	73.174	ENSHCOG00000017518	gpatch8	100	72.908	Hippocampus_comes
ENSNBRG00000016402	gpatch8	100	62.934	ENSIPUG00000015431	gpatch8	55	62.903	Ictalurus_punctatus
ENSNBRG00000016402	gpatch8	100	83.267	ENSKMAG00000018364	gpatch8	100	82.067	Kryptolebias_marmoratus
ENSNBRG00000016402	gpatch8	100	82.989	ENSLBEG00000023352	gpatch8	100	83.189	Labrus_bergylta
ENSNBRG00000016402	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	72	75.887	Lepisosteus_oculatus
ENSNBRG00000016402	gpatch8	100	85.274	ENSMAMG00000001618	gpatch8	100	86.511	Mastacembelus_armatus
ENSNBRG00000016402	gpatch8	100	98.726	ENSMZEG00005022584	gpatch8	100	98.726	Maylandia_zebra
ENSNBRG00000016402	gpatch8	61	82.135	ENSMMOG00000020472	gpatch8	100	81.528	Mola_mola
ENSNBRG00000016402	gpatch8	100	84.590	ENSMALG00000004204	gpatch8	100	82.388	Monopterus_albus
ENSNBRG00000016402	gpatch8	50	62.428	ENSMLUG00000013840	GPATCH8	52	63.314	Myotis_lucifugus
ENSNBRG00000016402	gpatch8	100	94.504	ENSONIG00000001292	gpatch8	100	98.178	Oreochromis_niloticus
ENSNBRG00000016402	gpatch8	99	79.169	ENSORLG00000028497	gpatch8	100	79.775	Oryzias_latipes
ENSNBRG00000016402	gpatch8	61	77.023	ENSORLG00020006656	gpatch8	100	79.761	Oryzias_latipes_hni
ENSNBRG00000016402	gpatch8	96	78.878	ENSORLG00015019797	gpatch8	100	80.159	Oryzias_latipes_hsok
ENSNBRG00000016402	gpatch8	56	74.911	ENSOMEG00000023809	gpatch8	100	80.626	Oryzias_melastigma
ENSNBRG00000016402	gpatch8	61	53.871	ENSPKIG00000018753	gpatch8	56	55.156	Paramormyrops_kingsleyae
ENSNBRG00000016402	gpatch8	56	56.773	ENSPKIG00000004860	GPATCH8	54	56.840	Paramormyrops_kingsleyae
ENSNBRG00000016402	gpatch8	100	77.535	ENSPMGG00000000730	gpatch8	99	77.469	Periophthalmus_magnuspinnatus
ENSNBRG00000016402	gpatch8	100	82.322	ENSPFOG00000014833	gpatch8	100	82.322	Poecilia_formosa
ENSNBRG00000016402	gpatch8	100	82.322	ENSPLAG00000001035	gpatch8	100	82.322	Poecilia_latipinna
ENSNBRG00000016402	gpatch8	100	82.588	ENSPMEG00000024032	gpatch8	100	82.255	Poecilia_mexicana
ENSNBRG00000016402	gpatch8	100	82.388	ENSPREG00000008911	gpatch8	100	82.055	Poecilia_reticulata
ENSNBRG00000016402	gpatch8	100	98.860	ENSPNYG00000009426	gpatch8	100	98.860	Pundamilia_nyererei
ENSNBRG00000016402	gpatch8	59	61.135	ENSPNAG00000016200	gpatch8	58	63.823	Pygocentrus_nattereri
ENSNBRG00000016402	gpatch8	56	57.324	ENSSFOG00015004299	GPATCH8	55	56.800	Scleropages_formosus
ENSNBRG00000016402	gpatch8	55	55.763	ENSSFOG00015021377	-	55	55.916	Scleropages_formosus
ENSNBRG00000016402	gpatch8	96	87.293	ENSSDUG00000018065	gpatch8	100	87.086	Seriola_dumerili
ENSNBRG00000016402	gpatch8	100	88.282	ENSSLDG00000009225	gpatch8	100	88.149	Seriola_lalandi_dorsalis
ENSNBRG00000016402	gpatch8	100	89.692	ENSSPAG00000011368	gpatch8	100	89.491	Stegastes_partitus
ENSNBRG00000016402	gpatch8	100	78.429	ENSTRUG00000020474	gpatch8	100	77.896	Takifugu_rubripes
ENSNBRG00000016402	gpatch8	59	61.232	ENSTBEG00000009486	GPATCH8	56	64.591	Tupaia_belangeri
ENSNBRG00000016402	gpatch8	55	69.492	ENSXETG00000008843	gpatch8	56	64.777	Xenopus_tropicalis
ENSNBRG00000016402	gpatch8	100	81.969	ENSXCOG00000016680	gpatch8	100	81.504	Xiphophorus_couchianus
ENSNBRG00000016402	gpatch8	100	82.157	ENSXMAG00000009217	gpatch8	100	81.691	Xiphophorus_maculatus