EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000016429 (Gene tree)
Gene ID: 102779846
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar MIF4G domain-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 11968 bases
Position: chrJH422308.1:3584569-3596536
Accession: 102779846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021434	MA3	PF02847.17	3.4e-22	1	1
ENSNBRP00000021421	MA3	PF02847.17	9.5e-22	1	1
ENSNBRP00000021421	MIF4G	PF02854.19	3.1e-21	1	1
ENSNBRP00000021434	MIF4G	PF02854.19	5.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000021999	-	3035	XM_006795060	ENSNBRP00000021421	835 (aa)	XP_006795123	UPI0003EC4A68
ENSNBRT00000022012	-	1671	-	ENSNBRP00000021434	556 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016429	nom1	99	66.184	ENSG00000146909	NOM1	85	58.480	Homo_sapiens
ENSNBRG00000016429	nom1	95	90.359	ENSAPOG00000012073	nom1	100	76.505	Acanthochromis_polyacanthus
ENSNBRG00000016429	nom1	94	65.201	ENSAMEG00000001412	NOM1	99	56.414	Ailuropoda_melanoleuca
ENSNBRG00000016429	nom1	94	93.130	ENSACIG00000018050	nom1	100	80.930	Amphilophus_citrinellus
ENSNBRG00000016429	nom1	95	89.981	ENSAOCG00000006229	nom1	100	77.156	Amphiprion_ocellaris
ENSNBRG00000016429	nom1	95	89.981	ENSAPEG00000015994	nom1	100	76.196	Amphiprion_percula
ENSNBRG00000016429	nom1	95	87.713	ENSATEG00000005405	nom1	100	75.685	Anabas_testudineus
ENSNBRG00000016429	nom1	94	66.667	ENSAPLG00000006585	NOM1	98	58.171	Anas_platyrhynchos
ENSNBRG00000016429	nom1	95	66.229	ENSACAG00000011192	NOM1	89	54.889	Anolis_carolinensis
ENSNBRG00000016429	nom1	100	97.735	ENSACLG00000000033	nom1	100	97.823	Astatotilapia_calliptera
ENSNBRG00000016429	nom1	95	74.717	ENSAMXG00000041486	nom1	65	73.118	Astyanax_mexicanus
ENSNBRG00000016429	nom1	99	64.014	ENSBTAG00000016435	NOM1	95	52.814	Bos_taurus
ENSNBRG00000016429	nom1	93	68.077	ENSCJAG00000004336	NOM1	95	54.874	Callithrix_jacchus
ENSNBRG00000016429	nom1	94	66.730	ENSCAFG00020005121	NOM1	83	56.593	Canis_lupus_dingo
ENSNBRG00000016429	nom1	94	65.966	ENSCHIG00000020102	NOM1	95	52.169	Capra_hircus
ENSNBRG00000016429	nom1	93	67.625	ENSTSYG00000000227	NOM1	83	57.756	Carlito_syrichta
ENSNBRG00000016429	nom1	93	68.906	ENSCAPG00000016273	NOM1	99	68.906	Cavia_aperea
ENSNBRG00000016429	nom1	94	64.381	ENSCPOG00000025538	NOM1	96	52.262	Cavia_porcellus
ENSNBRG00000016429	nom1	89	69.431	ENSCCAG00000014944	NOM1	99	68.362	Cebus_capucinus
ENSNBRG00000016429	nom1	94	65.970	ENSCLAG00000000267	NOM1	82	57.525	Chinchilla_lanigera
ENSNBRG00000016429	nom1	94	68.441	ENSCPBG00000018215	NOM1	74	65.889	Chrysemys_picta_bellii
ENSNBRG00000016429	nom1	93	41.154	ENSCING00000005248	-	96	36.755	Ciona_intestinalis
ENSNBRG00000016429	nom1	93	67.625	ENSCANG00000041984	NOM1	89	67.625	Colobus_angolensis_palliatus
ENSNBRG00000016429	nom1	93	67.823	ENSCGRG00001020293	Nom1	80	60.029	Cricetulus_griseus_chok1gshd
ENSNBRG00000016429	nom1	93	67.823	ENSCGRG00000005405	Nom1	97	67.823	Cricetulus_griseus_crigri
ENSNBRG00000016429	nom1	89	82.222	ENSCSEG00000000932	nom1	96	69.527	Cynoglossus_semilaevis
ENSNBRG00000016429	nom1	95	85.417	ENSCVAG00000007562	nom1	98	72.551	Cyprinodon_variegatus
ENSNBRG00000016429	nom1	95	77.401	ENSDARG00000060027	nom1	100	77.823	Danio_rerio
ENSNBRG00000016429	nom1	93	57.744	ENSDORG00000015682	Nom1	99	51.297	Dipodomys_ordii
ENSNBRG00000016429	nom1	89	38.824	FBgn0035336	CG9004	77	36.219	Drosophila_melanogaster
ENSNBRG00000016429	nom1	76	58.095	ENSETEG00000003104	NOM1	87	58.095	Echinops_telfairi
ENSNBRG00000016429	nom1	78	52.620	ENSEBUG00000010077	nom1	96	52.620	Eptatretus_burgeri
ENSNBRG00000016429	nom1	94	68.631	ENSEASG00005001489	NOM1	96	54.610	Equus_asinus_asinus
ENSNBRG00000016429	nom1	98	66.728	ENSECAG00000007596	NOM1	59	66.606	Equus_caballus
ENSNBRG00000016429	nom1	95	80.529	ENSELUG00000006266	nom1	98	66.745	Esox_lucius
ENSNBRG00000016429	nom1	99	63.964	ENSFCAG00000006467	NOM1	84	58.466	Felis_catus
ENSNBRG00000016429	nom1	94	68.441	ENSFALG00000006904	NOM1	99	58.523	Ficedula_albicollis
ENSNBRG00000016429	nom1	94	66.348	ENSFDAG00000016241	NOM1	97	53.357	Fukomys_damarensis
ENSNBRG00000016429	nom1	95	83.871	ENSFHEG00000015974	nom1	98	74.574	Fundulus_heteroclitus
ENSNBRG00000016429	nom1	94	75.096	ENSGMOG00000005129	nom1	100	61.928	Gadus_morhua
ENSNBRG00000016429	nom1	94	65.970	ENSGALG00000006437	NOM1	81	55.722	Gallus_gallus
ENSNBRG00000016429	nom1	95	84.470	ENSGAFG00000003211	nom1	98	74.788	Gambusia_affinis
ENSNBRG00000016429	nom1	94	68.441	ENSGAGG00000014347	NOM1	87	56.694	Gopherus_agassizii
ENSNBRG00000016429	nom1	99	65.642	ENSGGOG00000010920	NOM1	88	54.753	Gorilla_gorilla
ENSNBRG00000016429	nom1	100	97.611	ENSHBUG00000014616	nom1	100	97.611	Haplochromis_burtoni
ENSNBRG00000016429	nom1	99	65.580	ENSHGLG00000007392	NOM1	96	54.459	Heterocephalus_glaber_female
ENSNBRG00000016429	nom1	99	65.580	ENSHGLG00100014407	NOM1	96	68.590	Heterocephalus_glaber_male
ENSNBRG00000016429	nom1	57	78.616	ENSHCOG00000011999	-	86	77.778	Hippocampus_comes
ENSNBRG00000016429	nom1	95	72.642	ENSIPUG00000013980	nom1	98	60.240	Ictalurus_punctatus
ENSNBRG00000016429	nom1	93	69.231	ENSSTOG00000031736	NOM1	95	66.850	Ictidomys_tridecemlineatus
ENSNBRG00000016429	nom1	87	69.897	ENSJJAG00000011716	Nom1	98	69.897	Jaculus_jaculus
ENSNBRG00000016429	nom1	95	85.472	ENSLBEG00000009252	nom1	100	73.472	Labrus_bergylta
ENSNBRG00000016429	nom1	95	69.492	ENSLACG00000011777	NOM1	95	58.772	Latimeria_chalumnae
ENSNBRG00000016429	nom1	95	75.236	ENSLOCG00000012452	nom1	100	62.785	Lepisosteus_oculatus
ENSNBRG00000016429	nom1	99	59.386	ENSLAFG00000007119	NOM1	67	59.386	Loxodonta_africana
ENSNBRG00000016429	nom1	99	61.400	ENSMMUG00000039033	NOM1	95	51.679	Macaca_mulatta
ENSNBRG00000016429	nom1	93	68.008	ENSMLEG00000037062	NOM1	98	68.008	Mandrillus_leucophaeus
ENSNBRG00000016429	nom1	95	85.255	ENSMAMG00000004118	nom1	98	74.732	Mastacembelus_armatus
ENSNBRG00000016429	nom1	100	97.616	ENSMZEG00005000384	nom1	100	97.616	Maylandia_zebra
ENSNBRG00000016429	nom1	94	66.098	ENSMGAG00000005051	NOM1	99	58.453	Meleagris_gallopavo
ENSNBRG00000016429	nom1	93	68.208	ENSMAUG00000017988	Nom1	95	53.819	Mesocricetus_auratus
ENSNBRG00000016429	nom1	93	67.113	ENSMICG00000017531	NOM1	96	53.455	Microcebus_murinus
ENSNBRG00000016429	nom1	96	66.854	ENSMOCG00000015962	Nom1	95	53.855	Microtus_ochrogaster
ENSNBRG00000016429	nom1	95	79.450	ENSMMOG00000004419	nom1	99	70.340	Mola_mola
ENSNBRG00000016429	nom1	94	70.076	ENSMODG00000005177	NOM1	87	58.170	Monodelphis_domestica
ENSNBRG00000016429	nom1	87	87.552	ENSMALG00000008800	nom1	98	75.871	Monopterus_albus
ENSNBRG00000016429	nom1	93	67.052	MGP_CAROLIEiJ_G0027043	Nom1	94	53.809	Mus_caroli
ENSNBRG00000016429	nom1	93	66.859	ENSMUSG00000001569	Nom1	94	54.545	Mus_musculus
ENSNBRG00000016429	nom1	93	67.052	MGP_SPRETEiJ_G0028039	Nom1	94	53.995	Mus_spretus
ENSNBRG00000016429	nom1	94	63.671	ENSMPUG00000009745	NOM1	99	56.143	Mustela_putorius_furo
ENSNBRG00000016429	nom1	94	67.614	ENSMLUG00000009129	NOM1	93	65.357	Myotis_lucifugus
ENSNBRG00000016429	nom1	93	66.985	ENSNLEG00000000238	NOM1	95	53.708	Nomascus_leucogenys
ENSNBRG00000016429	nom1	77	74.900	ENSMEUG00000001108	NOM1	74	55.556	Notamacropus_eugenii
ENSNBRG00000016429	nom1	79	58.497	ENSOPRG00000014676	NOM1	70	51.915	Ochotona_princeps
ENSNBRG00000016429	nom1	93	66.475	ENSODEG00000009399	NOM1	98	58.934	Octodon_degus
ENSNBRG00000016429	nom1	95	97.353	ENSONIG00000005958	nom1	100	96.066	Oreochromis_niloticus
ENSNBRG00000016429	nom1	83	68.683	ENSOANG00000006139	-	97	68.683	Ornithorhynchus_anatinus
ENSNBRG00000016429	nom1	94	54.924	ENSOCUG00000021448	-	91	48.493	Oryctolagus_cuniculus
ENSNBRG00000016429	nom1	99	66.245	ENSOCUG00000004071	-	85	59.234	Oryctolagus_cuniculus
ENSNBRG00000016429	nom1	95	84.688	ENSORLG00000010541	nom1	98	73.798	Oryzias_latipes
ENSNBRG00000016429	nom1	95	84.688	ENSORLG00020010789	nom1	99	74.165	Oryzias_latipes_hni
ENSNBRG00000016429	nom1	95	84.499	ENSORLG00015010475	nom1	99	74.611	Oryzias_latipes_hsok
ENSNBRG00000016429	nom1	95	85.255	ENSOMEG00000004219	nom1	98	74.368	Oryzias_melastigma
ENSNBRG00000016429	nom1	93	67.241	ENSOGAG00000001124	NOM1	90	64.545	Otolemur_garnettii
ENSNBRG00000016429	nom1	94	65.966	ENSOARG00000007261	NOM1	96	54.953	Ovis_aries
ENSNBRG00000016429	nom1	99	65.823	ENSPPAG00000041374	NOM1	95	54.096	Pan_paniscus
ENSNBRG00000016429	nom1	99	63.669	ENSPTIG00000013532	NOM1	75	64.674	Panthera_tigris_altaica
ENSNBRG00000016429	nom1	99	65.823	ENSPTRG00000019917	NOM1	95	54.087	Pan_troglodytes
ENSNBRG00000016429	nom1	93	68.008	ENSPANG00000007605	NOM1	95	54.022	Papio_anubis
ENSNBRG00000016429	nom1	95	70.245	ENSPKIG00000005825	nom1	98	59.424	Paramormyrops_kingsleyae
ENSNBRG00000016429	nom1	95	68.809	ENSPSIG00000017848	NOM1	97	64.322	Pelodiscus_sinensis
ENSNBRG00000016429	nom1	95	85.606	ENSPMGG00000002577	nom1	100	71.617	Periophthalmus_magnuspinnatus
ENSNBRG00000016429	nom1	93	68.786	ENSPEMG00000024180	Nom1	95	54.306	Peromyscus_maniculatus_bairdii
ENSNBRG00000016429	nom1	94	68.939	ENSPCIG00000027941	NOM1	60	67.587	Phascolarctos_cinereus
ENSNBRG00000016429	nom1	95	85.283	ENSPFOG00000015771	nom1	99	75.181	Poecilia_formosa
ENSNBRG00000016429	nom1	95	85.660	ENSPLAG00000007856	nom1	99	73.325	Poecilia_latipinna
ENSNBRG00000016429	nom1	95	85.094	ENSPMEG00000014155	nom1	99	75.301	Poecilia_mexicana
ENSNBRG00000016429	nom1	95	85.094	ENSPREG00000008850	nom1	98	74.970	Poecilia_reticulata
ENSNBRG00000016429	nom1	93	62.835	ENSPPYG00000018222	NOM1	95	50.662	Pongo_abelii
ENSNBRG00000016429	nom1	77	62.326	ENSPCAG00000000440	NOM1	79	62.558	Procavia_capensis
ENSNBRG00000016429	nom1	94	66.477	ENSPCOG00000015222	NOM1	99	66.477	Propithecus_coquereli
ENSNBRG00000016429	nom1	99	63.177	ENSPVAG00000014760	NOM1	95	52.226	Pteropus_vampyrus
ENSNBRG00000016429	nom1	100	97.139	ENSPNYG00000006975	nom1	100	97.139	Pundamilia_nyererei
ENSNBRG00000016429	nom1	95	74.669	ENSPNAG00000011085	nom1	98	58.050	Pygocentrus_nattereri
ENSNBRG00000016429	nom1	93	63.006	ENSRNOG00000048969	AABR07059041.1	99	51.640	Rattus_norvegicus
ENSNBRG00000016429	nom1	99	65.642	ENSRBIG00000037042	NOM1	95	54.207	Rhinopithecus_bieti
ENSNBRG00000016429	nom1	99	65.280	ENSRROG00000037293	NOM1	95	53.966	Rhinopithecus_roxellana
ENSNBRG00000016429	nom1	72	31.221	YLR336C	-	50	31.749	Saccharomyces_cerevisiae
ENSNBRG00000016429	nom1	94	70.076	ENSSHAG00000017998	-	99	58.493	Sarcophilus_harrisii
ENSNBRG00000016429	nom1	74	63.923	ENSSHAG00000002835	-	99	63.923	Sarcophilus_harrisii
ENSNBRG00000016429	nom1	87	72.634	ENSSFOG00015003196	nom1	100	72.840	Scleropages_formosus
ENSNBRG00000016429	nom1	95	87.335	ENSSMAG00000011047	nom1	98	76.471	Scophthalmus_maximus
ENSNBRG00000016429	nom1	95	87.902	ENSSDUG00000006834	nom1	100	77.076	Seriola_dumerili
ENSNBRG00000016429	nom1	95	87.335	ENSSLDG00000021812	nom1	100	76.033	Seriola_lalandi_dorsalis
ENSNBRG00000016429	nom1	94	56.530	ENSSPUG00000002556	NOM1	100	55.144	Sphenodon_punctatus
ENSNBRG00000016429	nom1	95	89.981	ENSSPAG00000000953	nom1	100	77.739	Stegastes_partitus
ENSNBRG00000016429	nom1	94	67.871	ENSTGUG00000000702	-	99	55.464	Taeniopygia_guttata
ENSNBRG00000016429	nom1	61	66.959	ENSTGUG00000016587	-	100	66.959	Taeniopygia_guttata
ENSNBRG00000016429	nom1	95	83.365	ENSTRUG00000010239	nom1	98	71.256	Takifugu_rubripes
ENSNBRG00000016429	nom1	99	78.182	ENSTNIG00000012783	nom1	100	70.253	Tetraodon_nigroviridis
ENSNBRG00000016429	nom1	97	64.954	ENSTTRG00000009691	NOM1	80	58.993	Tursiops_truncatus
ENSNBRG00000016429	nom1	94	65.392	ENSUAMG00000025450	NOM1	83	55.814	Ursus_americanus
ENSNBRG00000016429	nom1	94	65.392	ENSUMAG00000014275	NOM1	99	55.679	Ursus_maritimus
ENSNBRG00000016429	nom1	94	66.922	ENSVVUG00000002608	NOM1	82	67.580	Vulpes_vulpes
ENSNBRG00000016429	nom1	90	66.667	ENSXETG00000021611	nom1	82	72.683	Xenopus_tropicalis
ENSNBRG00000016429	nom1	95	85.227	ENSXMAG00000002451	nom1	98	74.455	Xiphophorus_maculatus