EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016455 (Gene tree)
Gene ID: 102776315
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6229 bases
Position: chrJH422328.1:2245906-2252134
Accession: 102776315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021462	MMR_HSR1	PF01926.23	3.8e-05	1	1
ENSNBRP00000021457	MMR_HSR1	PF01926.23	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022035	-	546	-	ENSNBRP00000021457	181 (aa)	-	-
ENSNBRT00000022040	-	3363	XM_006798210	ENSNBRP00000021462	180 (aa)	XP_006798273	UPI00022B1C9D

Gene Model

Click here to download ENSNBRG00000016455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016455	-	92	47.126	ENSNBRG00000015182	-	88	47.126
ENSNBRG00000016455	-	92	43.678	ENSNBRG00000017591	ARL6	85	43.678
ENSNBRG00000016455	-	90	33.742	ENSNBRG00000018737	arl8ba	88	33.742
ENSNBRG00000016455	-	100	91.713	ENSNBRG00000023803	arf2b	100	91.713
ENSNBRG00000016455	-	96	31.609	ENSNBRG00000010663	arl8a	93	31.609
ENSNBRG00000016455	-	91	31.429	ENSNBRG00000014004	-	88	31.429
ENSNBRG00000016455	-	92	33.735	ENSNBRG00000023542	arl8bb	89	33.735
ENSNBRG00000016455	-	98	42.623	ENSNBRG00000018555	-	91	42.623
ENSNBRG00000016455	-	97	49.143	ENSNBRG00000015782	arl8	97	49.143
ENSNBRG00000016455	-	98	50.282	ENSNBRG00000000570	arl5a	99	50.282
ENSNBRG00000016455	-	97	44.068	ENSNBRG00000010560	arl3l2	95	44.068
ENSNBRG00000016455	-	90	31.579	ENSNBRG00000004078	arl13b	69	31.579
ENSNBRG00000016455	-	100	91.160	ENSNBRG00000016833	-	100	91.160
ENSNBRG00000016455	-	93	47.977	ENSNBRG00000020745	arl4cb	88	47.701
ENSNBRG00000016455	-	83	50.331	ENSNBRG00000006393	arl2	90	50.331
ENSNBRG00000016455	-	94	42.458	ENSNBRG00000004364	-	93	42.458
ENSNBRG00000016455	-	98	91.011	ENSNBRG00000017218	arf3b	84	91.011
ENSNBRG00000016455	-	98	48.295	ENSNBRG00000020245	arl5c	100	48.780
ENSNBRG00000016455	-	74	33.835	ENSNBRG00000018772	sar1ab	67	33.835
ENSNBRG00000016455	-	92	46.386	ENSNBRG00000007962	arl3	91	46.386
ENSNBRG00000016455	-	97	85.057	ENSNBRG00000018854	arf5	97	85.057
ENSNBRG00000016455	-	98	59.322	ENSNBRG00000019783	arl1	98	59.322
ENSNBRG00000016455	-	91	46.341	ENSNBRG00000005929	-	88	46.341
ENSNBRG00000016455	-	99	93.296	ENSNBRG00000011196	-	99	93.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016455	-	100	98.333	ENSACIG00000012192	-	100	98.333	Amphilophus_citrinellus
ENSNBRG00000016455	-	84	95.364	ENSAOCG00000001275	-	88	95.364	Amphiprion_ocellaris
ENSNBRG00000016455	-	100	95.000	ENSAPEG00000016909	-	100	95.000	Amphiprion_percula
ENSNBRG00000016455	-	100	96.667	ENSATEG00000003174	-	100	96.667	Anabas_testudineus
ENSNBRG00000016455	-	100	100.000	ENSACLG00000004123	-	100	100.000	Astatotilapia_calliptera
ENSNBRG00000016455	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSNBRG00000016455	-	100	96.111	ENSCVAG00000013374	-	100	96.111	Cyprinodon_variegatus
ENSNBRG00000016455	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSNBRG00000016455	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSNBRG00000016455	-	100	96.111	ENSFHEG00000005859	-	100	96.111	Fundulus_heteroclitus
ENSNBRG00000016455	-	96	91.379	ENSGMOG00000000429	arf1	95	91.379	Gadus_morhua
ENSNBRG00000016455	-	100	96.111	ENSGAFG00000018151	-	100	96.111	Gambusia_affinis
ENSNBRG00000016455	-	100	85.556	ENSGACG00000014195	-	97	85.556	Gasterosteus_aculeatus
ENSNBRG00000016455	-	100	100.000	ENSHBUG00000002636	-	100	100.000	Haplochromis_burtoni
ENSNBRG00000016455	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSNBRG00000016455	-	100	93.333	ENSKMAG00000018315	-	100	93.333	Kryptolebias_marmoratus
ENSNBRG00000016455	-	99	89.944	ENSLBEG00000001998	arf1	99	89.944	Labrus_bergylta
ENSNBRG00000016455	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSNBRG00000016455	-	100	95.556	ENSMAMG00000001553	-	100	95.556	Mastacembelus_armatus
ENSNBRG00000016455	-	100	100.000	ENSMZEG00005022594	-	100	100.000	Maylandia_zebra
ENSNBRG00000016455	-	100	96.667	ENSMALG00000004269	-	100	96.667	Monopterus_albus
ENSNBRG00000016455	-	100	100.000	ENSONIG00000001286	-	100	100.000	Oreochromis_niloticus
ENSNBRG00000016455	-	100	95.556	ENSORLG00000023270	-	100	95.556	Oryzias_latipes
ENSNBRG00000016455	-	100	95.000	ENSORLG00020006712	-	100	95.000	Oryzias_latipes_hni
ENSNBRG00000016455	-	100	95.556	ENSORLG00015019836	-	100	95.556	Oryzias_latipes_hsok
ENSNBRG00000016455	-	100	95.556	ENSOMEG00000023784	-	100	95.556	Oryzias_melastigma
ENSNBRG00000016455	-	100	90.608	ENSPMGG00000014174	arf1	100	90.608	Periophthalmus_magnuspinnatus
ENSNBRG00000016455	-	100	91.667	ENSPMAG00000002035	arf1	100	91.667	Petromyzon_marinus
ENSNBRG00000016455	-	100	96.111	ENSPFOG00000014787	-	100	96.111	Poecilia_formosa
ENSNBRG00000016455	-	100	96.111	ENSPLAG00000001041	-	100	96.111	Poecilia_latipinna
ENSNBRG00000016455	-	100	96.111	ENSPMEG00000024077	-	100	96.111	Poecilia_mexicana
ENSNBRG00000016455	-	100	96.111	ENSPREG00000009009	-	100	96.111	Poecilia_reticulata
ENSNBRG00000016455	-	100	100.000	ENSPNYG00000009472	-	100	100.000	Pundamilia_nyererei
ENSNBRG00000016455	-	98	91.011	ENSPNAG00000000098	arf1	98	91.011	Pygocentrus_nattereri
ENSNBRG00000016455	-	99	76.536	YDL137W	-	99	76.536	Saccharomyces_cerevisiae
ENSNBRG00000016455	-	99	77.222	YDL192W	-	99	77.222	Saccharomyces_cerevisiae
ENSNBRG00000016455	-	100	89.444	ENSSMAG00000006125	-	100	89.444	Scophthalmus_maximus
ENSNBRG00000016455	-	100	95.000	ENSSDUG00000017356	-	100	95.000	Seriola_dumerili
ENSNBRG00000016455	-	100	95.000	ENSSLDG00000008504	-	100	95.000	Seriola_lalandi_dorsalis
ENSNBRG00000016455	-	100	96.111	ENSSPAG00000011431	-	100	96.111	Stegastes_partitus
ENSNBRG00000016455	-	100	93.889	ENSTRUG00000019870	-	100	93.889	Takifugu_rubripes
ENSNBRG00000016455	-	100	92.222	ENSTNIG00000011685	-	100	92.222	Tetraodon_nigroviridis
ENSNBRG00000016455	-	100	96.111	ENSXCOG00000016687	-	98	96.111	Xiphophorus_couchianus
ENSNBRG00000016455	-	100	96.111	ENSXMAG00000009193	-	100	96.111	Xiphophorus_maculatus