EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016554 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4871 bases
Position: chrJH422305.1:3205612-3210482
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021582	S10_plectin	PF03501.15	1.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022163	-	519	-	ENSNBRP00000021582	172 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016554	-	78	52.555	ENSNBRG00000009084	rps10	98	46.821
ENSNBRG00000016554	-	67	63.115	ENSNBRG00000008848	-	98	56.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016554	-	74	56.716	ENSAPOG00000014059	-	91	56.716	Acanthochromis_polyacanthus
ENSNBRG00000016554	-	84	62.759	ENSAPOG00000016494	-	73	62.759	Acanthochromis_polyacanthus
ENSNBRG00000016554	-	81	79.856	ENSACIG00000019704	-	71	79.856	Amphilophus_citrinellus
ENSNBRG00000016554	-	73	56.818	ENSACIG00000013806	-	73	56.818	Amphilophus_citrinellus
ENSNBRG00000016554	-	80	54.795	ENSAOCG00000011000	-	85	54.795	Amphiprion_ocellaris
ENSNBRG00000016554	-	66	73.451	ENSAOCG00000007730	-	65	73.451	Amphiprion_ocellaris
ENSNBRG00000016554	-	61	62.857	ENSAPEG00000019531	-	59	62.857	Amphiprion_percula
ENSNBRG00000016554	-	51	64.773	ENSAPEG00000017745	-	56	64.773	Amphiprion_percula
ENSNBRG00000016554	-	56	77.083	ENSATEG00000004340	-	68	77.083	Anabas_testudineus
ENSNBRG00000016554	-	100	97.093	ENSACLG00000001013	-	100	97.093	Astatotilapia_calliptera
ENSNBRG00000016554	-	67	60.656	ENSAMXG00000037914	-	73	60.656	Astyanax_mexicanus
ENSNBRG00000016554	-	85	42.568	WBGene00004479	rps-10	89	42.568	Caenorhabditis_elegans
ENSNBRG00000016554	-	58	57.576	ENSCING00000006180	-	62	57.576	Ciona_intestinalis
ENSNBRG00000016554	-	78	53.147	ENSCSEG00000009179	-	84	53.147	Cynoglossus_semilaevis
ENSNBRG00000016554	-	85	47.059	FBgn0285947	RpS10b	91	47.059	Drosophila_melanogaster
ENSNBRG00000016554	-	57	55.102	FBgn0027494	RpS10a	79	47.407	Drosophila_melanogaster
ENSNBRG00000016554	-	56	56.701	ENSEBUG00000015221	-	63	56.701	Eptatretus_burgeri
ENSNBRG00000016554	-	61	61.905	ENSECAG00000039725	-	51	61.905	Equus_caballus
ENSNBRG00000016554	-	76	54.676	ENSFHEG00000008769	-	87	54.676	Fundulus_heteroclitus
ENSNBRG00000016554	-	67	60.656	ENSGAFG00000001335	-	63	60.656	Gambusia_affinis
ENSNBRG00000016554	-	75	56.618	ENSHBUG00000023819	-	73	62.295	Haplochromis_burtoni
ENSNBRG00000016554	-	100	97.674	ENSHBUG00000018067	-	100	97.674	Haplochromis_burtoni
ENSNBRG00000016554	-	74	71.875	ENSLBEG00000020432	-	84	71.875	Labrus_bergylta
ENSNBRG00000016554	-	84	50.658	ENSLACG00000010998	-	87	50.658	Latimeria_chalumnae
ENSNBRG00000016554	-	100	97.093	ENSMZEG00005026198	-	100	97.093	Maylandia_zebra
ENSNBRG00000016554	-	75	58.088	ENSMZEG00005007838	-	82	58.088	Maylandia_zebra
ENSNBRG00000016554	-	85	51.316	ENSMMOG00000003228	-	85	51.316	Mola_mola
ENSNBRG00000016554	-	77	61.654	ENSMMOG00000014380	-	65	61.654	Mola_mola
ENSNBRG00000016554	-	67	62.295	ENSMALG00000015614	-	76	62.295	Monopterus_albus
ENSNBRG00000016554	-	80	54.730	ENSPKIG00000013061	-	81	54.730	Paramormyrops_kingsleyae
ENSNBRG00000016554	-	67	59.016	ENSPMGG00000017071	-	65	59.016	Periophthalmus_magnuspinnatus
ENSNBRG00000016554	-	78	53.676	ENSPMAG00000010266	-	73	53.676	Petromyzon_marinus
ENSNBRG00000016554	-	88	42.384	ENSPMAG00000003064	-	88	42.384	Petromyzon_marinus
ENSNBRG00000016554	-	58	66.000	ENSPLAG00000012690	-	60	66.000	Poecilia_latipinna
ENSNBRG00000016554	-	75	57.353	ENSPNYG00000012665	-	73	63.115	Pundamilia_nyererei
ENSNBRG00000016554	-	100	96.512	ENSPNYG00000006286	-	100	96.512	Pundamilia_nyererei
ENSNBRG00000016554	-	83	55.634	ENSPNAG00000021290	-	80	55.634	Pygocentrus_nattereri
ENSNBRG00000016554	-	53	46.739	YMR230W	RPS10B	86	46.739	Saccharomyces_cerevisiae
ENSNBRG00000016554	-	53	46.739	YOR293W	RPS10A	86	46.739	Saccharomyces_cerevisiae
ENSNBRG00000016554	-	57	67.677	ENSSFOG00015012004	-	56	67.677	Scleropages_formosus
ENSNBRG00000016554	-	82	56.000	ENSSFOG00015009603	-	75	56.000	Scleropages_formosus
ENSNBRG00000016554	-	74	55.224	ENSSDUG00000010997	-	80	55.224	Seriola_dumerili
ENSNBRG00000016554	-	74	66.154	ENSSDUG00000011052	-	82	66.154	Seriola_dumerili
ENSNBRG00000016554	-	76	53.957	ENSSLDG00000012473	-	89	53.957	Seriola_lalandi_dorsalis
ENSNBRG00000016554	-	94	60.123	ENSSLDG00000016257	-	91	60.123	Seriola_lalandi_dorsalis
ENSNBRG00000016554	-	88	56.954	ENSSPAG00000012512	-	75	56.954	Stegastes_partitus
ENSNBRG00000016554	-	60	63.462	ENSSPAG00000015615	-	81	63.462	Stegastes_partitus
ENSNBRG00000016554	-	71	56.098	ENSSSCG00000033521	-	76	56.098	Sus_scrofa
ENSNBRG00000016554	-	73	49.630	ENSXETG00000032983	-	71	51.852	Xenopus_tropicalis
ENSNBRG00000016554	-	76	55.000	ENSXCOG00000016917	-	86	55.000	Xiphophorus_couchianus
ENSNBRG00000016554	-	79	52.206	ENSXMAG00000029046	-	78	52.206	Xiphophorus_maculatus