EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016582 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 28057 bases
Position: chrJH422491.1:55068-83124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	1	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	2	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	3	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	4	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	5	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	6	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	7	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	8	9
ENSNBRP00000021625	zf-C2H2	PF00096.26	3.2e-44	9	9
ENSNBRP00000021625	zf-met	PF12874.7	2.3e-13	1	2
ENSNBRP00000021625	zf-met	PF12874.7	2.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022207	-	1386	-	ENSNBRP00000021625	461 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016582	-	84	43.028	ENSNBRG00000007311	-	80	43.028
ENSNBRG00000016582	-	92	41.310	ENSNBRG00000024354	-	98	41.310
ENSNBRG00000016582	-	85	45.726	ENSNBRG00000005849	-	90	48.148
ENSNBRG00000016582	-	89	40.123	ENSNBRG00000012391	gfi1b	69	40.123
ENSNBRG00000016582	-	85	42.584	ENSNBRG00000021355	-	92	42.584
ENSNBRG00000016582	-	90	42.969	ENSNBRG00000024048	-	94	42.969
ENSNBRG00000016582	-	92	44.279	ENSNBRG00000004523	-	94	44.279
ENSNBRG00000016582	-	87	33.096	ENSNBRG00000019987	GZF1	58	34.008
ENSNBRG00000016582	-	86	43.293	ENSNBRG00000019481	-	93	42.065
ENSNBRG00000016582	-	90	41.600	ENSNBRG00000016666	-	97	41.600
ENSNBRG00000016582	-	93	44.444	ENSNBRG00000016282	-	93	44.444
ENSNBRG00000016582	-	85	48.505	ENSNBRG00000001608	-	94	48.505
ENSNBRG00000016582	-	84	41.870	ENSNBRG00000000305	-	79	43.624
ENSNBRG00000016582	-	94	49.206	ENSNBRG00000008106	-	99	49.206
ENSNBRG00000016582	-	90	41.975	ENSNBRG00000008123	-	81	42.569
ENSNBRG00000016582	-	84	40.000	ENSNBRG00000018718	zbtb47b	67	40.000
ENSNBRG00000016582	-	82	37.984	ENSNBRG00000012376	-	98	37.984
ENSNBRG00000016582	-	90	48.708	ENSNBRG00000009815	-	82	48.708
ENSNBRG00000016582	-	85	40.659	ENSNBRG00000004792	-	52	40.659
ENSNBRG00000016582	-	92	37.531	ENSNBRG00000016550	-	87	38.186
ENSNBRG00000016582	-	86	45.395	ENSNBRG00000021960	zbtb17	63	45.395
ENSNBRG00000016582	-	82	43.860	ENSNBRG00000010351	-	93	43.860
ENSNBRG00000016582	-	84	42.211	ENSNBRG00000000492	-	67	42.211
ENSNBRG00000016582	-	95	45.483	ENSNBRG00000003124	-	92	43.321
ENSNBRG00000016582	-	84	43.434	ENSNBRG00000016639	-	55	43.434
ENSNBRG00000016582	-	84	44.601	ENSNBRG00000016219	-	84	44.601
ENSNBRG00000016582	-	87	42.286	ENSNBRG00000022241	-	88	42.286
ENSNBRG00000016582	-	86	44.578	ENSNBRG00000004822	-	53	44.578
ENSNBRG00000016582	-	84	43.939	ENSNBRG00000007602	-	80	43.939
ENSNBRG00000016582	-	97	43.068	ENSNBRG00000000960	-	99	46.218
ENSNBRG00000016582	-	93	46.067	ENSNBRG00000009075	znf236	79	46.067
ENSNBRG00000016582	-	84	45.000	ENSNBRG00000023956	-	60	45.213
ENSNBRG00000016582	-	51	41.250	ENSNBRG00000017383	-	65	41.250
ENSNBRG00000016582	-	84	42.657	ENSNBRG00000013838	-	58	42.657
ENSNBRG00000016582	-	90	35.294	ENSNBRG00000018449	PRDM15	50	35.294
ENSNBRG00000016582	-	92	44.569	ENSNBRG00000001163	-	97	43.590
ENSNBRG00000016582	-	89	35.461	ENSNBRG00000011785	snai2	96	35.461
ENSNBRG00000016582	-	86	36.765	ENSNBRG00000013983	scrt1b	54	36.765
ENSNBRG00000016582	-	83	43.299	ENSNBRG00000024020	-	56	43.299
ENSNBRG00000016582	-	83	35.673	ENSNBRG00000021967	-	66	34.930
ENSNBRG00000016582	-	85	51.047	ENSNBRG00000005805	-	98	51.047
ENSNBRG00000016582	-	84	42.553	ENSNBRG00000021998	-	55	42.553
ENSNBRG00000016582	-	84	47.183	ENSNBRG00000002902	-	99	42.234
ENSNBRG00000016582	-	85	39.924	ENSNBRG00000009811	-	92	39.924
ENSNBRG00000016582	-	84	43.860	ENSNBRG00000004381	-	76	42.718
ENSNBRG00000016582	-	82	39.130	ENSNBRG00000003394	-	56	39.130
ENSNBRG00000016582	-	86	39.744	ENSNBRG00000024086	-	62	45.143
ENSNBRG00000016582	-	87	44.186	ENSNBRG00000024345	-	89	44.186
ENSNBRG00000016582	-	95	41.144	ENSNBRG00000024344	-	75	39.015
ENSNBRG00000016582	-	87	42.574	ENSNBRG00000008223	-	91	39.877
ENSNBRG00000016582	-	86	40.708	ENSNBRG00000001834	-	100	40.708
ENSNBRG00000016582	-	95	41.463	ENSNBRG00000016577	si:dkey-182i3.9	92	41.463
ENSNBRG00000016582	-	88	43.866	ENSNBRG00000000321	-	99	42.806
ENSNBRG00000016582	-	88	39.259	ENSNBRG00000024294	-	75	39.259
ENSNBRG00000016582	-	87	36.364	ENSNBRG00000024293	-	86	36.364
ENSNBRG00000016582	-	86	35.099	ENSNBRG00000005175	zbtb41	68	33.434
ENSNBRG00000016582	-	91	46.853	ENSNBRG00000005823	-	88	47.319
ENSNBRG00000016582	-	85	44.767	ENSNBRG00000024054	-	62	44.767
ENSNBRG00000016582	-	90	42.276	ENSNBRG00000024051	-	52	42.276
ENSNBRG00000016582	-	88	43.915	ENSNBRG00000019770	-	86	44.954
ENSNBRG00000016582	-	84	39.437	ENSNBRG00000009279	-	90	45.789
ENSNBRG00000016582	-	85	47.706	ENSNBRG00000004557	-	86	45.070
ENSNBRG00000016582	-	84	49.524	ENSNBRG00000015873	-	99	49.524
ENSNBRG00000016582	-	92	39.362	ENSNBRG00000000708	-	88	39.362
ENSNBRG00000016582	-	83	44.248	ENSNBRG00000007171	wt1b	50	39.623
ENSNBRG00000016582	-	79	31.387	ENSNBRG00000014403	-	57	31.387
ENSNBRG00000016582	-	88	46.087	ENSNBRG00000010405	-	85	51.471
ENSNBRG00000016582	-	85	33.673	ENSNBRG00000004976	prdm5	76	33.645
ENSNBRG00000016582	-	91	41.007	ENSNBRG00000006757	-	88	40.580
ENSNBRG00000016582	-	85	41.379	ENSNBRG00000023960	-	68	41.379
ENSNBRG00000016582	-	88	44.848	ENSNBRG00000023229	-	80	44.848
ENSNBRG00000016582	-	84	34.722	ENSNBRG00000007221	scrt2	51	34.722
ENSNBRG00000016582	-	84	45.833	ENSNBRG00000001761	-	67	45.833
ENSNBRG00000016582	-	85	45.178	ENSNBRG00000010194	-	64	44.878
ENSNBRG00000016582	-	89	36.620	ENSNBRG00000008827	znf319b	91	34.286
ENSNBRG00000016582	-	89	42.683	ENSNBRG00000006411	-	89	42.683
ENSNBRG00000016582	-	84	51.376	ENSNBRG00000000793	-	100	51.376
ENSNBRG00000016582	-	85	39.860	ENSNBRG00000010987	-	72	39.860
ENSNBRG00000016582	-	83	42.857	ENSNBRG00000001641	-	75	42.857
ENSNBRG00000016582	-	86	43.981	ENSNBRG00000007384	-	51	43.981
ENSNBRG00000016582	-	84	44.755	ENSNBRG00000024046	-	54	44.755
ENSNBRG00000016582	-	90	45.378	ENSNBRG00000024179	-	62	42.953
ENSNBRG00000016582	-	84	39.200	ENSNBRG00000007276	-	62	39.200
ENSNBRG00000016582	-	84	45.946	ENSNBRG00000003000	-	86	45.946
ENSNBRG00000016582	-	83	41.081	ENSNBRG00000009128	-	57	40.449
ENSNBRG00000016582	-	85	45.185	ENSNBRG00000013583	-	95	45.185
ENSNBRG00000016582	-	87	46.012	ENSNBRG00000013604	-	78	46.012
ENSNBRG00000016582	-	85	50.000	ENSNBRG00000003250	-	92	44.043
ENSNBRG00000016582	-	85	43.523	ENSNBRG00000004723	-	94	43.523
ENSNBRG00000016582	-	86	35.599	ENSNBRG00000000292	znf710b	52	35.599
ENSNBRG00000016582	-	85	43.871	ENSNBRG00000013501	-	84	43.871
ENSNBRG00000016582	-	86	44.619	ENSNBRG00000000523	-	66	44.619
ENSNBRG00000016582	-	85	44.681	ENSNBRG00000021375	-	51	44.681
ENSNBRG00000016582	-	90	42.593	ENSNBRG00000016564	-	83	41.379
ENSNBRG00000016582	-	91	46.053	ENSNBRG00000014088	-	99	46.053
ENSNBRG00000016582	-	86	47.761	ENSNBRG00000016234	-	65	43.333
ENSNBRG00000016582	-	94	40.416	ENSNBRG00000016603	-	94	40.523
ENSNBRG00000016582	-	86	44.637	ENSNBRG00000006125	-	92	44.637
ENSNBRG00000016582	-	83	45.528	ENSNBRG00000015652	-	87	45.528
ENSNBRG00000016582	-	88	43.580	ENSNBRG00000024066	-	88	42.000
ENSNBRG00000016582	-	93	43.643	ENSNBRG00000000577	-	89	42.143
ENSNBRG00000016582	-	85	45.483	ENSNBRG00000005796	-	97	45.092
ENSNBRG00000016582	-	88	40.223	ENSNBRG00000021237	-	93	40.223
ENSNBRG00000016582	-	85	35.165	ENSNBRG00000015442	ZNF319	88	35.165
ENSNBRG00000016582	-	85	42.222	ENSNBRG00000019004	-	72	42.222
ENSNBRG00000016582	-	85	38.953	ENSNBRG00000002946	-	53	38.953
ENSNBRG00000016582	-	87	42.105	ENSNBRG00000016169	-	68	41.449
ENSNBRG00000016582	-	93	50.413	ENSNBRG00000002542	-	99	49.187
ENSNBRG00000016582	-	90	38.017	ENSNBRG00000020314	si:dkey-89b17.4	90	38.017
ENSNBRG00000016582	-	91	45.517	ENSNBRG00000024019	-	88	45.517
ENSNBRG00000016582	-	91	41.958	ENSNBRG00000024014	-	71	41.958
ENSNBRG00000016582	-	93	42.400	ENSNBRG00000022534	znf646	73	42.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016582	-	84	48.485	ENSACIG00000011153	-	75	48.485	Amphilophus_citrinellus
ENSNBRG00000016582	-	84	47.302	ENSACIG00000019791	-	94	45.000	Amphilophus_citrinellus
ENSNBRG00000016582	-	85	47.302	ENSACLG00000022499	-	81	48.454	Astatotilapia_calliptera
ENSNBRG00000016582	-	89	42.903	ENSACLG00000014167	-	72	42.903	Astatotilapia_calliptera
ENSNBRG00000016582	-	86	48.254	ENSACLG00000017329	-	84	48.254	Astatotilapia_calliptera
ENSNBRG00000016582	-	83	50.000	ENSACLG00000001507	-	78	50.000	Astatotilapia_calliptera
ENSNBRG00000016582	-	79	41.475	ENSACLG00000020474	-	84	41.475	Astatotilapia_calliptera
ENSNBRG00000016582	-	86	42.054	ENSAMXG00000039770	-	87	42.054	Astyanax_mexicanus
ENSNBRG00000016582	-	83	49.770	ENSAMXG00000038324	-	77	49.770	Astyanax_mexicanus
ENSNBRG00000016582	-	83	45.048	ENSAMXG00000036849	-	82	45.048	Astyanax_mexicanus
ENSNBRG00000016582	-	89	48.454	ENSAMXG00000010078	-	87	48.454	Astyanax_mexicanus
ENSNBRG00000016582	-	87	45.965	ENSAMXG00000031844	-	91	45.965	Astyanax_mexicanus
ENSNBRG00000016582	-	83	44.948	ENSAMXG00000039162	-	96	44.948	Astyanax_mexicanus
ENSNBRG00000016582	-	85	47.674	ENSAMXG00000031501	-	90	47.674	Astyanax_mexicanus
ENSNBRG00000016582	-	83	48.018	ENSAMXG00000031646	-	94	48.018	Astyanax_mexicanus
ENSNBRG00000016582	-	94	45.312	ENSCHIG00000015741	-	87	45.312	Capra_hircus
ENSNBRG00000016582	-	85	44.404	ENSCCAG00000035188	-	86	43.458	Cebus_capucinus
ENSNBRG00000016582	-	85	41.026	ENSCPBG00000001258	-	93	41.026	Chrysemys_picta_bellii
ENSNBRG00000016582	-	91	44.772	ENSDNOG00000048084	-	99	44.772	Dasypus_novemcinctus
ENSNBRG00000016582	-	89	40.952	ENSETEG00000002865	-	84	40.952	Echinops_telfairi
ENSNBRG00000016582	-	83	39.583	ENSEBUG00000011582	-	78	39.583	Eptatretus_burgeri
ENSNBRG00000016582	-	83	48.101	ENSEBUG00000008157	-	99	48.101	Eptatretus_burgeri
ENSNBRG00000016582	-	89	44.654	ENSEBUG00000012748	-	73	44.654	Eptatretus_burgeri
ENSNBRG00000016582	-	83	44.025	ENSEBUG00000011479	-	72	44.025	Eptatretus_burgeri
ENSNBRG00000016582	-	92	43.293	ENSECAG00000035557	-	75	43.293	Equus_caballus
ENSNBRG00000016582	-	87	38.328	ENSFHEG00000016184	-	74	38.491	Fundulus_heteroclitus
ENSNBRG00000016582	-	86	38.408	ENSGMOG00000004315	-	98	38.408	Gadus_morhua
ENSNBRG00000016582	-	90	35.577	ENSGACG00000019863	-	98	35.577	Gasterosteus_aculeatus
ENSNBRG00000016582	-	83	44.509	ENSGAGG00000013851	-	80	44.509	Gopherus_agassizii
ENSNBRG00000016582	-	84	45.798	ENSGAGG00000007230	-	97	45.798	Gopherus_agassizii
ENSNBRG00000016582	-	94	47.953	ENSHBUG00000019800	-	96	47.953	Haplochromis_burtoni
ENSNBRG00000016582	-	83	44.783	ENSHBUG00000006238	-	97	47.881	Haplochromis_burtoni
ENSNBRG00000016582	-	92	44.850	ENSHBUG00000017372	-	99	44.850	Haplochromis_burtoni
ENSNBRG00000016582	-	83	44.878	ENSHBUG00000000146	-	78	44.878	Haplochromis_burtoni
ENSNBRG00000016582	-	89	41.558	ENSHBUG00000021028	-	83	41.558	Haplochromis_burtoni
ENSNBRG00000016582	-	88	46.012	ENSHBUG00000013264	-	85	43.785	Haplochromis_burtoni
ENSNBRG00000016582	-	91	43.314	ENSHGLG00000018394	-	96	42.994	Heterocephalus_glaber_female
ENSNBRG00000016582	-	83	41.892	ENSIPUG00000021527	-	93	43.220	Ictalurus_punctatus
ENSNBRG00000016582	-	84	42.509	ENSIPUG00000021434	-	97	43.243	Ictalurus_punctatus
ENSNBRG00000016582	-	89	45.946	ENSIPUG00000001941	-	89	45.946	Ictalurus_punctatus
ENSNBRG00000016582	-	91	44.180	ENSIPUG00000022751	-	97	44.819	Ictalurus_punctatus
ENSNBRG00000016582	-	85	45.673	ENSIPUG00000006936	-	93	45.673	Ictalurus_punctatus
ENSNBRG00000016582	-	85	48.876	ENSIPUG00000009750	-	94	48.876	Ictalurus_punctatus
ENSNBRG00000016582	-	86	44.257	ENSIPUG00000013065	-	99	44.013	Ictalurus_punctatus
ENSNBRG00000016582	-	84	47.059	ENSIPUG00000003960	-	78	47.059	Ictalurus_punctatus
ENSNBRG00000016582	-	85	45.455	ENSIPUG00000011073	-	98	45.455	Ictalurus_punctatus
ENSNBRG00000016582	-	83	49.261	ENSIPUG00000021484	-	98	49.261	Ictalurus_punctatus
ENSNBRG00000016582	-	86	45.000	ENSIPUG00000015233	-	59	45.000	Ictalurus_punctatus
ENSNBRG00000016582	-	84	43.011	ENSIPUG00000021518	-	88	42.994	Ictalurus_punctatus
ENSNBRG00000016582	-	94	44.340	ENSIPUG00000021472	-	86	42.523	Ictalurus_punctatus
ENSNBRG00000016582	-	84	45.093	ENSSTOG00000034297	-	67	45.093	Ictidomys_tridecemlineatus
ENSNBRG00000016582	-	83	45.487	ENSMFAG00000046052	-	87	45.424	Macaca_fascicularis
ENSNBRG00000016582	-	83	45.424	ENSMNEG00000041636	-	87	46.185	Macaca_nemestrina
ENSNBRG00000016582	-	83	45.487	ENSMLEG00000032640	-	87	45.424	Mandrillus_leucophaeus
ENSNBRG00000016582	-	89	38.727	ENSMAMG00000009051	-	88	41.714	Mastacembelus_armatus
ENSNBRG00000016582	-	83	45.000	ENSMZEG00005027950	-	90	45.000	Maylandia_zebra
ENSNBRG00000016582	-	89	47.500	ENSMZEG00005027285	-	87	47.500	Maylandia_zebra
ENSNBRG00000016582	-	83	47.989	ENSMZEG00005012737	-	79	50.543	Maylandia_zebra
ENSNBRG00000016582	-	84	54.237	ENSMZEG00005019982	-	96	54.237	Maylandia_zebra
ENSNBRG00000016582	-	86	49.590	ENSMZEG00005020736	-	88	49.038	Maylandia_zebra
ENSNBRG00000016582	-	82	49.351	ENSMZEG00005021421	-	95	49.351	Maylandia_zebra
ENSNBRG00000016582	-	86	47.137	ENSMALG00000004413	-	97	47.137	Monopterus_albus
ENSNBRG00000016582	-	86	53.968	ENSONIG00000007931	-	85	53.968	Oreochromis_niloticus
ENSNBRG00000016582	-	86	54.054	ENSONIG00000008953	-	98	54.054	Oreochromis_niloticus
ENSNBRG00000016582	-	92	42.708	ENSONIG00000020516	-	96	42.424	Oreochromis_niloticus
ENSNBRG00000016582	-	83	47.863	ENSONIG00000021124	-	99	47.863	Oreochromis_niloticus
ENSNBRG00000016582	-	84	44.180	ENSONIG00000000122	-	98	44.180	Oreochromis_niloticus
ENSNBRG00000016582	-	87	53.723	ENSONIG00000000093	-	99	53.723	Oreochromis_niloticus
ENSNBRG00000016582	-	84	46.602	ENSONIG00000015166	-	100	46.602	Oreochromis_niloticus
ENSNBRG00000016582	-	87	60.000	ENSONIG00000001834	-	100	60.000	Oreochromis_niloticus
ENSNBRG00000016582	-	91	44.000	ENSORLG00015012951	-	82	43.333	Oryzias_latipes_hsok
ENSNBRG00000016582	-	83	47.312	ENSOGAG00000025289	-	83	47.312	Otolemur_garnettii
ENSNBRG00000016582	-	83	45.487	ENSPANG00000030978	-	96	45.050	Papio_anubis
ENSNBRG00000016582	-	84	40.113	ENSPEMG00000016975	Zfp940	76	41.262	Peromyscus_maniculatus_bairdii
ENSNBRG00000016582	-	89	42.678	ENSPMEG00000004595	-	96	41.463	Poecilia_mexicana
ENSNBRG00000016582	-	85	47.432	ENSPPYG00000009906	-	76	47.432	Pongo_abelii
ENSNBRG00000016582	-	84	48.352	ENSPNYG00000024244	-	92	48.352	Pundamilia_nyererei
ENSNBRG00000016582	-	87	45.098	ENSPNAG00000019338	-	98	45.687	Pygocentrus_nattereri
ENSNBRG00000016582	-	88	46.067	ENSPNAG00000011625	-	94	46.067	Pygocentrus_nattereri
ENSNBRG00000016582	-	83	45.848	ENSSBOG00000029728	-	87	45.763	Saimiri_boliviensis_boliviensis
ENSNBRG00000016582	-	85	44.180	ENSSPUG00000010059	-	90	44.180	Sphenodon_punctatus