EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4027 bases
Position: chrJH422491.1:81420-85446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	1	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	2	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	3	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	4	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	5	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	6	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	7	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	8	9
ENSNBRP00000021658	zf-C2H2	PF00096.26	1.7e-49	9	9
ENSNBRP00000021658	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022240	-	1347	-	ENSNBRP00000021658	448 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016603	-	88	42.453	ENSNBRG00000001834	-	100	42.453
ENSNBRG00000016603	-	93	36.612	ENSNBRG00000005175	zbtb41	66	36.612
ENSNBRG00000016603	-	87	45.113	ENSNBRG00000019481	-	93	42.582
ENSNBRG00000016603	-	94	46.809	ENSNBRG00000021998	-	70	46.809
ENSNBRG00000016603	-	91	45.902	ENSNBRG00000004523	-	93	45.902
ENSNBRG00000016603	-	92	37.324	ENSNBRG00000007221	scrt2	69	37.324
ENSNBRG00000016603	-	86	44.444	ENSNBRG00000000793	-	100	44.444
ENSNBRG00000016603	-	93	33.518	ENSNBRG00000008827	znf319b	97	33.854
ENSNBRG00000016603	-	89	42.353	ENSNBRG00000004792	-	57	42.353
ENSNBRG00000016603	-	90	45.415	ENSNBRG00000007311	-	80	45.415
ENSNBRG00000016603	-	86	46.354	ENSNBRG00000001641	-	78	46.354
ENSNBRG00000016603	-	88	45.623	ENSNBRG00000000523	-	67	45.623
ENSNBRG00000016603	-	90	38.400	ENSNBRG00000020314	si:dkey-89b17.4	90	38.400
ENSNBRG00000016603	-	93	42.647	ENSNBRG00000000321	-	99	42.647
ENSNBRG00000016603	-	93	43.137	ENSNBRG00000024086	-	63	43.137
ENSNBRG00000016603	-	87	41.573	ENSNBRG00000012391	gfi1b	56	41.573
ENSNBRG00000016603	-	87	40.838	ENSNBRG00000021375	-	57	40.838
ENSNBRG00000016603	-	93	44.643	ENSNBRG00000008106	-	95	44.643
ENSNBRG00000016603	-	88	38.571	ENSNBRG00000004976	prdm5	75	38.571
ENSNBRG00000016603	-	95	41.270	ENSNBRG00000013983	scrt1b	58	41.270
ENSNBRG00000016603	-	96	51.220	ENSNBRG00000010987	-	79	51.220
ENSNBRG00000016603	-	87	44.828	ENSNBRG00000004723	-	91	44.828
ENSNBRG00000016603	-	88	39.130	ENSNBRG00000003394	-	64	39.130
ENSNBRG00000016603	-	92	39.683	ENSNBRG00000014882	-	52	39.683
ENSNBRG00000016603	-	94	39.604	ENSNBRG00000002946	-	71	39.604
ENSNBRG00000016603	-	88	40.351	ENSNBRG00000001761	-	65	40.351
ENSNBRG00000016603	-	61	42.308	ENSNBRG00000017383	-	90	42.308
ENSNBRG00000016603	-	88	38.298	ENSNBRG00000023091	snai1a	60	38.298
ENSNBRG00000016603	-	93	38.636	ENSNBRG00000007276	-	68	38.636
ENSNBRG00000016603	-	88	39.098	ENSNBRG00000020159	znf526	89	38.554
ENSNBRG00000016603	-	92	46.903	ENSNBRG00000000960	-	99	44.291
ENSNBRG00000016603	-	89	44.582	ENSNBRG00000024345	-	89	44.582
ENSNBRG00000016603	-	90	41.207	ENSNBRG00000024344	-	80	41.040
ENSNBRG00000016603	-	87	45.387	ENSNBRG00000000577	-	75	45.387
ENSNBRG00000016603	-	87	46.821	ENSNBRG00000016219	-	85	46.821
ENSNBRG00000016603	-	96	41.121	ENSNBRG00000007602	-	86	41.121
ENSNBRG00000016603	-	87	44.134	ENSNBRG00000022241	-	87	44.134
ENSNBRG00000016603	-	88	46.632	ENSNBRG00000023229	-	80	46.632
ENSNBRG00000016603	-	87	45.455	ENSNBRG00000010194	-	68	45.455
ENSNBRG00000016603	-	84	38.043	ENSNBRG00000014403	-	58	38.043
ENSNBRG00000016603	-	92	42.998	ENSNBRG00000016169	-	66	42.998
ENSNBRG00000016603	-	91	43.878	ENSNBRG00000008223	-	96	38.983
ENSNBRG00000016603	-	90	56.522	ENSNBRG00000015652	-	87	56.522
ENSNBRG00000016603	-	95	50.000	ENSNBRG00000001163	-	99	47.653
ENSNBRG00000016603	-	95	42.254	ENSNBRG00000024020	-	59	43.646
ENSNBRG00000016603	-	88	42.895	ENSNBRG00000016564	-	81	42.083
ENSNBRG00000016603	-	93	45.755	ENSNBRG00000005849	-	93	45.755
ENSNBRG00000016603	-	87	47.170	ENSNBRG00000001829	sall4	59	41.176
ENSNBRG00000016603	-	87	40.000	ENSNBRG00000010351	-	93	40.000
ENSNBRG00000016603	-	91	41.333	ENSNBRG00000024294	-	80	41.333
ENSNBRG00000016603	-	90	39.716	ENSNBRG00000024293	-	88	39.716
ENSNBRG00000016603	-	89	41.923	ENSNBRG00000000305	-	79	42.727
ENSNBRG00000016603	-	89	40.741	ENSNBRG00000012376	-	100	40.741
ENSNBRG00000016603	-	88	44.591	ENSNBRG00000008123	-	81	46.982
ENSNBRG00000016603	-	88	50.725	ENSNBRG00000014088	-	99	50.725
ENSNBRG00000016603	-	89	44.324	ENSNBRG00000013604	-	74	44.324
ENSNBRG00000016603	-	87	40.426	ENSNBRG00000018141	-	57	40.426
ENSNBRG00000016603	-	89	45.749	ENSNBRG00000024019	-	86	45.749
ENSNBRG00000016603	-	87	41.791	ENSNBRG00000024014	-	72	41.791
ENSNBRG00000016603	-	92	40.102	ENSNBRG00000016550	-	85	40.187
ENSNBRG00000016603	-	90	37.398	ENSNBRG00000000708	-	95	37.398
ENSNBRG00000016603	-	90	43.922	ENSNBRG00000016234	-	70	43.922
ENSNBRG00000016603	-	87	46.465	ENSNBRG00000019770	-	91	46.465
ENSNBRG00000016603	-	92	40.143	ENSNBRG00000009128	-	55	40.143
ENSNBRG00000016603	-	88	44.595	ENSNBRG00000013501	-	78	44.595
ENSNBRG00000016603	-	92	47.674	ENSNBRG00000004381	-	87	47.674
ENSNBRG00000016603	-	87	47.208	ENSNBRG00000013583	-	96	46.825
ENSNBRG00000016603	-	87	47.586	ENSNBRG00000000492	-	67	47.586
ENSNBRG00000016603	-	88	47.368	ENSNBRG00000016666	-	94	55.882
ENSNBRG00000016603	-	87	44.403	ENSNBRG00000024048	-	82	43.568
ENSNBRG00000016603	-	87	42.958	ENSNBRG00000018718	zbtb47b	69	42.958
ENSNBRG00000016603	-	83	36.735	ENSNBRG00000014299	znf131	55	32.456
ENSNBRG00000016603	-	84	33.333	ENSNBRG00000016032	patz1	52	33.333
ENSNBRG00000016603	-	90	48.867	ENSNBRG00000001608	-	97	48.867
ENSNBRG00000016603	-	87	43.304	ENSNBRG00000007384	-	52	43.304
ENSNBRG00000016603	-	95	38.947	ENSNBRG00000011785	snai2	82	38.947
ENSNBRG00000016603	-	94	44.552	ENSNBRG00000005823	-	87	44.665
ENSNBRG00000016603	-	92	46.087	ENSNBRG00000006757	-	85	46.281
ENSNBRG00000016603	-	88	37.037	ENSNBRG00000006411	-	87	39.683
ENSNBRG00000016603	-	95	34.564	ENSNBRG00000021237	-	91	34.564
ENSNBRG00000016603	-	94	40.523	ENSNBRG00000016582	-	94	40.416
ENSNBRG00000016603	-	94	49.254	ENSNBRG00000024179	-	67	49.254
ENSNBRG00000016603	-	96	30.562	ENSNBRG00000018449	PRDM15	53	30.543
ENSNBRG00000016603	-	95	42.424	ENSNBRG00000002902	-	98	44.167
ENSNBRG00000016603	-	93	43.716	ENSNBRG00000009815	-	83	43.716
ENSNBRG00000016603	-	87	44.211	ENSNBRG00000009811	-	88	44.211
ENSNBRG00000016603	-	93	46.789	ENSNBRG00000009279	-	91	46.789
ENSNBRG00000016603	-	93	33.333	ENSNBRG00000015442	ZNF319	89	33.333
ENSNBRG00000016603	-	89	47.423	ENSNBRG00000016577	si:dkey-182i3.9	92	47.423
ENSNBRG00000016603	-	91	51.562	ENSNBRG00000021247	-	58	51.667
ENSNBRG00000016603	-	90	50.000	ENSNBRG00000006445	-	57	50.000
ENSNBRG00000016603	-	88	41.667	ENSNBRG00000023960	-	69	41.667
ENSNBRG00000016603	-	86	52.381	ENSNBRG00000010405	-	91	45.320
ENSNBRG00000016603	-	94	47.685	ENSNBRG00000003250	-	96	45.374
ENSNBRG00000016603	-	88	40.000	ENSNBRG00000019987	GZF1	52	40.000
ENSNBRG00000016603	-	92	45.607	ENSNBRG00000005796	-	96	43.158
ENSNBRG00000016603	-	88	43.007	ENSNBRG00000004822	-	57	43.007
ENSNBRG00000016603	-	87	41.935	ENSNBRG00000019004	-	62	41.935
ENSNBRG00000016603	-	94	40.187	ENSNBRG00000009075	znf236	78	40.187
ENSNBRG00000016603	-	94	41.176	ENSNBRG00000024066	-	91	39.446
ENSNBRG00000016603	-	88	46.809	ENSNBRG00000024354	-	96	43.519
ENSNBRG00000016603	-	90	40.074	ENSNBRG00000021355	-	89	40.074
ENSNBRG00000016603	-	95	42.785	ENSNBRG00000005805	-	96	43.869
ENSNBRG00000016603	-	90	43.062	ENSNBRG00000021960	zbtb17	56	56.000
ENSNBRG00000016603	-	85	35.692	ENSNBRG00000021967	-	66	35.692
ENSNBRG00000016603	-	88	47.059	ENSNBRG00000023956	-	66	47.059
ENSNBRG00000016603	-	87	51.230	ENSNBRG00000002542	-	85	50.207
ENSNBRG00000016603	-	88	45.070	ENSNBRG00000003000	-	81	44.860
ENSNBRG00000016603	-	99	44.500	ENSNBRG00000016282	-	90	50.000
ENSNBRG00000016603	-	88	45.973	ENSNBRG00000006125	-	92	45.973
ENSNBRG00000016603	-	93	30.049	ENSNBRG00000022534	znf646	99	44.737
ENSNBRG00000016603	-	94	47.945	ENSNBRG00000015873	-	96	45.946
ENSNBRG00000016603	-	87	46.132	ENSNBRG00000004557	-	87	46.132
ENSNBRG00000016603	-	91	46.575	ENSNBRG00000003124	-	95	42.424
ENSNBRG00000016603	-	90	45.050	ENSNBRG00000024054	-	60	45.050
ENSNBRG00000016603	-	87	43.750	ENSNBRG00000024051	-	56	41.772
ENSNBRG00000016603	-	91	35.786	ENSNBRG00000000292	znf710b	54	35.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016603	-	91	45.082	ENSACIG00000019791	-	93	45.274	Amphilophus_citrinellus
ENSNBRG00000016603	-	91	59.259	ENSACIG00000011153	-	67	59.259	Amphilophus_citrinellus
ENSNBRG00000016603	-	91	40.084	ENSANAG00000032414	-	84	40.084	Aotus_nancymaae
ENSNBRG00000016603	-	87	47.727	ENSACLG00000014167	-	71	47.727	Astatotilapia_calliptera
ENSNBRG00000016603	-	87	47.826	ENSACLG00000001507	-	75	47.826	Astatotilapia_calliptera
ENSNBRG00000016603	-	92	43.299	ENSACLG00000020474	-	84	43.299	Astatotilapia_calliptera
ENSNBRG00000016603	-	93	43.276	ENSACLG00000022499	-	93	43.276	Astatotilapia_calliptera
ENSNBRG00000016603	-	90	50.806	ENSACLG00000017329	-	83	50.806	Astatotilapia_calliptera
ENSNBRG00000016603	-	87	48.182	ENSAMXG00000031646	-	94	48.182	Astyanax_mexicanus
ENSNBRG00000016603	-	87	46.290	ENSAMXG00000038324	-	78	46.290	Astyanax_mexicanus
ENSNBRG00000016603	-	87	44.286	ENSAMXG00000039162	-	99	44.286	Astyanax_mexicanus
ENSNBRG00000016603	-	89	40.674	ENSAMXG00000036849	-	98	45.486	Astyanax_mexicanus
ENSNBRG00000016603	-	89	43.682	ENSAMXG00000039770	-	83	43.682	Astyanax_mexicanus
ENSNBRG00000016603	-	92	47.328	ENSAMXG00000010078	-	91	47.328	Astyanax_mexicanus
ENSNBRG00000016603	-	98	44.481	ENSAMXG00000031844	-	94	44.867	Astyanax_mexicanus
ENSNBRG00000016603	-	87	47.463	ENSAMXG00000031501	-	94	47.463	Astyanax_mexicanus
ENSNBRG00000016603	-	94	47.000	ENSCHIG00000015741	-	99	47.000	Capra_hircus
ENSNBRG00000016603	-	90	46.352	ENSCCAG00000035188	-	88	45.016	Cebus_capucinus
ENSNBRG00000016603	-	90	40.571	ENSCPBG00000001258	-	97	40.571	Chrysemys_picta_bellii
ENSNBRG00000016603	-	91	46.719	ENSDNOG00000048084	-	99	46.719	Dasypus_novemcinctus
ENSNBRG00000016603	-	87	37.408	ENSETEG00000002865	-	81	37.423	Echinops_telfairi
ENSNBRG00000016603	-	94	41.848	ENSEBUG00000011582	-	83	41.848	Eptatretus_burgeri
ENSNBRG00000016603	-	90	42.982	ENSEBUG00000008157	-	99	42.982	Eptatretus_burgeri
ENSNBRG00000016603	-	90	44.622	ENSEBUG00000012748	-	69	44.622	Eptatretus_burgeri
ENSNBRG00000016603	-	91	43.284	ENSEBUG00000011479	-	78	43.284	Eptatretus_burgeri
ENSNBRG00000016603	-	88	40.864	ENSECAG00000035557	-	77	40.506	Equus_caballus
ENSNBRG00000016603	-	94	39.706	ENSFHEG00000016184	-	73	39.706	Fundulus_heteroclitus
ENSNBRG00000016603	-	89	36.760	ENSGMOG00000004315	-	97	36.760	Gadus_morhua
ENSNBRG00000016603	-	95	38.710	ENSGACG00000019863	-	99	38.710	Gasterosteus_aculeatus
ENSNBRG00000016603	-	93	41.379	ENSGAGG00000007230	-	84	40.755	Gopherus_agassizii
ENSNBRG00000016603	-	93	41.277	ENSGAGG00000013851	-	85	41.277	Gopherus_agassizii
ENSNBRG00000016603	-	87	44.800	ENSHBUG00000000146	-	80	44.800	Haplochromis_burtoni
ENSNBRG00000016603	-	89	47.368	ENSHBUG00000013264	-	90	47.368	Haplochromis_burtoni
ENSNBRG00000016603	-	87	44.483	ENSHBUG00000017372	-	96	44.079	Haplochromis_burtoni
ENSNBRG00000016603	-	86	51.685	ENSHBUG00000021028	-	83	39.732	Haplochromis_burtoni
ENSNBRG00000016603	-	93	47.638	ENSHBUG00000006238	-	93	47.638	Haplochromis_burtoni
ENSNBRG00000016603	-	88	45.810	ENSHBUG00000019800	-	94	45.810	Haplochromis_burtoni
ENSNBRG00000016603	-	88	44.058	ENSHGLG00000018394	-	96	44.058	Heterocephalus_glaber_female
ENSNBRG00000016603	-	87	45.545	ENSIPUG00000003960	-	76	45.545	Ictalurus_punctatus
ENSNBRG00000016603	-	88	47.807	ENSIPUG00000011073	-	97	45.370	Ictalurus_punctatus
ENSNBRG00000016603	-	87	51.562	ENSIPUG00000021484	-	99	51.562	Ictalurus_punctatus
ENSNBRG00000016603	-	88	54.348	ENSIPUG00000009750	-	94	54.348	Ictalurus_punctatus
ENSNBRG00000016603	-	91	46.442	ENSIPUG00000015233	-	70	44.751	Ictalurus_punctatus
ENSNBRG00000016603	-	88	46.591	ENSIPUG00000021472	-	81	46.591	Ictalurus_punctatus
ENSNBRG00000016603	-	93	42.342	ENSIPUG00000006936	-	97	40.741	Ictalurus_punctatus
ENSNBRG00000016603	-	89	45.556	ENSIPUG00000021527	-	94	45.556	Ictalurus_punctatus
ENSNBRG00000016603	-	90	51.534	ENSIPUG00000021518	-	89	51.190	Ictalurus_punctatus
ENSNBRG00000016603	-	87	48.571	ENSIPUG00000013065	-	95	48.438	Ictalurus_punctatus
ENSNBRG00000016603	-	93	44.309	ENSIPUG00000001941	-	98	44.309	Ictalurus_punctatus
ENSNBRG00000016603	-	90	46.809	ENSIPUG00000022751	-	96	47.887	Ictalurus_punctatus
ENSNBRG00000016603	-	89	44.558	ENSIPUG00000021434	-	99	44.558	Ictalurus_punctatus
ENSNBRG00000016603	-	87	45.758	ENSSTOG00000034297	-	73	45.758	Ictidomys_tridecemlineatus
ENSNBRG00000016603	-	90	47.895	ENSMFAG00000046052	-	89	47.895	Macaca_fascicularis
ENSNBRG00000016603	-	90	47.895	ENSMNEG00000041636	-	89	47.895	Macaca_nemestrina
ENSNBRG00000016603	-	90	47.895	ENSMLEG00000032640	-	89	47.895	Mandrillus_leucophaeus
ENSNBRG00000016603	-	98	42.901	ENSMAMG00000009051	-	94	42.901	Mastacembelus_armatus
ENSNBRG00000016603	-	89	48.649	ENSMZEG00005012737	-	81	48.649	Maylandia_zebra
ENSNBRG00000016603	-	87	46.067	ENSMZEG00005027285	-	82	46.067	Maylandia_zebra
ENSNBRG00000016603	-	88	48.673	ENSMZEG00005021421	-	97	48.673	Maylandia_zebra
ENSNBRG00000016603	-	87	46.795	ENSMZEG00005027950	-	90	46.795	Maylandia_zebra
ENSNBRG00000016603	-	89	45.882	ENSMZEG00005019982	-	95	45.882	Maylandia_zebra
ENSNBRG00000016603	-	92	46.983	ENSMZEG00005020736	-	98	48.333	Maylandia_zebra
ENSNBRG00000016603	-	90	47.350	ENSMALG00000004413	-	99	47.350	Monopterus_albus
ENSNBRG00000016603	-	87	39.326	ENSONIG00000000093	-	99	39.119	Oreochromis_niloticus
ENSNBRG00000016603	-	88	48.454	ENSONIG00000021124	-	99	48.454	Oreochromis_niloticus
ENSNBRG00000016603	-	87	43.578	ENSONIG00000007931	-	89	43.578	Oreochromis_niloticus
ENSNBRG00000016603	-	87	43.933	ENSONIG00000001834	-	99	43.933	Oreochromis_niloticus
ENSNBRG00000016603	-	87	46.036	ENSONIG00000015166	-	100	46.036	Oreochromis_niloticus
ENSNBRG00000016603	-	91	46.445	ENSONIG00000000122	-	99	46.445	Oreochromis_niloticus
ENSNBRG00000016603	-	87	42.857	ENSONIG00000020516	-	96	42.857	Oreochromis_niloticus
ENSNBRG00000016603	-	87	44.068	ENSONIG00000008953	-	97	40.854	Oreochromis_niloticus
ENSNBRG00000016603	-	94	42.017	ENSORLG00015012951	-	91	44.531	Oryzias_latipes_hsok
ENSNBRG00000016603	-	92	47.423	ENSOGAG00000025289	-	85	47.423	Otolemur_garnettii
ENSNBRG00000016603	-	90	47.895	ENSPANG00000030978	-	95	47.895	Papio_anubis
ENSNBRG00000016603	-	87	37.216	ENSPEMG00000016975	Zfp940	74	37.143	Peromyscus_maniculatus_bairdii
ENSNBRG00000016603	-	88	42.857	ENSPMEG00000004595	-	93	43.750	Poecilia_mexicana
ENSNBRG00000016603	-	88	55.385	ENSPPYG00000009906	-	71	55.385	Pongo_abelii
ENSNBRG00000016603	-	88	45.791	ENSPNYG00000024244	-	85	45.791	Pundamilia_nyererei
ENSNBRG00000016603	-	88	42.249	ENSPNAG00000019338	-	95	41.971	Pygocentrus_nattereri
ENSNBRG00000016603	-	88	43.357	ENSPNAG00000011625	-	96	43.548	Pygocentrus_nattereri
ENSNBRG00000016603	-	90	47.895	ENSSBOG00000029728	-	89	47.895	Saimiri_boliviensis_boliviensis
ENSNBRG00000016603	-	88	44.935	ENSSPUG00000010059	-	89	44.935	Sphenodon_punctatus