EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000016633 (Gene tree)
Gene ID
102784553
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
12107 bases
Position
chrJH422317.1:1809191-1821297
Accession
102784553
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000022191PABPPF00658.188.1e-3011
ENSNBRP00000022157PABPPF00658.181e-2911
ENSNBRP00000022138PABPPF00658.181.1e-2911
ENSNBRP00000022191RRM_5PF13893.64.3e-0912
ENSNBRP00000022191RRM_5PF13893.64.3e-0922
ENSNBRP00000022157RRM_5PF13893.65.4e-0912
ENSNBRP00000022157RRM_5PF13893.65.4e-0922
ENSNBRP00000022138RRM_5PF13893.67.6e-0912
ENSNBRP00000022138RRM_5PF13893.67.6e-0922
ENSNBRP00000022157RRM_1PF00076.229.3e-8914
ENSNBRP00000022157RRM_1PF00076.229.3e-8924
ENSNBRP00000022157RRM_1PF00076.229.3e-8934
ENSNBRP00000022157RRM_1PF00076.229.3e-8944
ENSNBRP00000022138RRM_1PF00076.221.3e-8814
ENSNBRP00000022138RRM_1PF00076.221.3e-8824
ENSNBRP00000022138RRM_1PF00076.221.3e-8834
ENSNBRP00000022138RRM_1PF00076.221.3e-8844
ENSNBRP00000022191RRM_1PF00076.223.7e-8214
ENSNBRP00000022191RRM_1PF00076.223.7e-8224
ENSNBRP00000022191RRM_1PF00076.223.7e-8234
ENSNBRP00000022191RRM_1PF00076.223.7e-8244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000022742-1755-ENSNBRP00000022157584 (aa)--
ENSNBRT00000022776-1503-ENSNBRP00000022191500 (aa)--
ENSNBRT00000022723-1866XM_006796392ENSNBRP00000022138621 (aa)XP_006796455-
Gene Model
Click here to download ENSNBRG00000016633's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016633's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000016633pabpc1l9976.228ENSNBRG00000003068-9975.708
ENSNBRG00000016633pabpc1l5937.209ENSNBRG00000011418celf5a6137.113
ENSNBRG00000016633pabpc1l5431.548ENSNBRG00000014522-7131.548
ENSNBRG00000016633pabpc1l6837.079ENSNBRG00000021290elavl1a8837.079
ENSNBRG00000016633pabpc1l6532.877ENSNBRG00000000146-6432.192
ENSNBRG00000016633pabpc1l9975.294ENSNBRG00000013737pabpc1b9875.294
ENSNBRG00000016633pabpc1l5536.047ENSNBRG00000000322-5336.047
ENSNBRG00000016633pabpc1l6532.877ENSNBRG00000001232ncl6232.192
ENSNBRG00000016633pabpc1l6035.616ENSNBRG00000012818-5835.616
ENSNBRG00000016633pabpc1l6340.789ENSNBRG00000005913rbm197040.789
ENSNBRG00000016633pabpc1l6970.303ENSNBRG00000010047-7170.732
ENSNBRG00000016633pabpc1l6839.241ENSNBRG00000006218-9832.967
ENSNBRG00000016633pabpc1l7182.292ENSNBRG00000009708pabpc49882.692
ENSNBRG00000016633pabpc1l6632.759ENSNBRG00000023764-9332.759
ENSNBRG00000016633pabpc1l6230.126ENSNBRG00000016849tial18732.203
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000016633pabpc1l9979.310ENSG00000101104PABPC1L9976.235Homo_sapiens
ENSNBRG00000016633pabpc1l9984.580ENSAPOG00000010842pabpc1l9984.466Acanthochromis_polyacanthus
ENSNBRG00000016633pabpc1l9877.108ENSAMEG00000004099PABPC1L10063.509Ailuropoda_melanoleuca
ENSNBRG00000016633pabpc1l10096.016ENSACIG00000021004-10096.016Amphilophus_citrinellus
ENSNBRG00000016633pabpc1l10088.675ENSAOCG00000006167-10086.422Amphiprion_ocellaris
ENSNBRG00000016633pabpc1l10090.133ENSAPEG00000010558-10089.183Amphiprion_percula
ENSNBRG00000016633pabpc1l9994.699ENSATEG00000007428pabpc1l9994.699Anabas_testudineus
ENSNBRG00000016633pabpc1l9978.177ENSAPLG00000008415PABPC1L9978.177Anas_platyrhynchos
ENSNBRG00000016633pabpc1l9976.765ENSACAG00000011841PABPC1L9974.841Anolis_carolinensis
ENSNBRG00000016633pabpc1l9969.794ENSANAG00000026826PABPC1L9869.794Aotus_nancymaae
ENSNBRG00000016633pabpc1l10098.403ENSACLG00000024791pabpc1l10098.403Astatotilapia_calliptera
ENSNBRG00000016633pabpc1l10083.693ENSAMXG00000013552pabpc1l9983.693Astyanax_mexicanus
ENSNBRG00000016633pabpc1l7468.487ENSBTAG00000016849PABPC1L8761.246Bos_taurus
ENSNBRG00000016633pabpc1l7286.014ENSBTAG00000055300-10086.905Bos_taurus
ENSNBRG00000016633pabpc1l9969.794ENSCJAG00000017628PABPC1L9869.794Callithrix_jacchus
ENSNBRG00000016633pabpc1l6881.208ENSCJAG00000038506-10081.034Callithrix_jacchus
ENSNBRG00000016633pabpc1l9970.320ENSCAFG00000009573PABPC1L9970.320Canis_familiaris
ENSNBRG00000016633pabpc1l9973.558ENSCAFG00020013828PABPC1L9773.558Canis_lupus_dingo
ENSNBRG00000016633pabpc1l9774.038ENSCHIG00000025759PABPC1L9074.038Capra_hircus
ENSNBRG00000016633pabpc1l9973.621ENSTSYG00000006645PABPC1L9873.621Carlito_syrichta
ENSNBRG00000016633pabpc1l9968.835ENSCAPG00000014519PABPC1L9968.835Cavia_aperea
ENSNBRG00000016633pabpc1l9970.096ENSCPOG00000013633PABPC1L9963.738Cavia_porcellus
ENSNBRG00000016633pabpc1l9975.532ENSCCAG00000023338PABPC1L9968.116Cebus_capucinus
ENSNBRG00000016633pabpc1l9978.161ENSCATG00000034065PABPC1L9872.902Cercocebus_atys
ENSNBRG00000016633pabpc1l9971.429ENSCLAG00000005298PABPC1L9963.680Chinchilla_lanigera
ENSNBRG00000016633pabpc1l9978.161ENSCSAG00000014242PABPC1L9872.662Chlorocebus_sabaeus
ENSNBRG00000016633pabpc1l8278.657ENSCPBG00000017755-9979.864Chrysemys_picta_bellii
ENSNBRG00000016633pabpc1l6985.496ENSCPBG00000007810-9185.496Chrysemys_picta_bellii
ENSNBRG00000016633pabpc1l8376.190ENSCING00000002796-7476.190Ciona_intestinalis
ENSNBRG00000016633pabpc1l9967.327ENSCSAVG00000003102-10085.714Ciona_savignyi
ENSNBRG00000016633pabpc1l9877.381ENSCSAVG00000004246-9871.523Ciona_savignyi
ENSNBRG00000016633pabpc1l9972.554ENSCANG00000037530PABPC1L9965.610Colobus_angolensis_palliatus
ENSNBRG00000016633pabpc1l9967.146ENSCGRG00001021938Pabpc1l9967.146Cricetulus_griseus_chok1gshd
ENSNBRG00000016633pabpc1l9967.146ENSCGRG00000007946Pabpc1l9967.146Cricetulus_griseus_crigri
ENSNBRG00000016633pabpc1l10081.192ENSCSEG00000021295pabpc1l9981.192Cynoglossus_semilaevis
ENSNBRG00000016633pabpc1l10094.699ENSCVAG00000015943-9996.947Cyprinodon_variegatus
ENSNBRG00000016633pabpc1l9983.173ENSDARG00000002597pabpc1l8895.385Danio_rerio
ENSNBRG00000016633pabpc1l9975.000ENSDNOG00000048450PABPC1L9968.328Dasypus_novemcinctus
ENSNBRG00000016633pabpc1l9970.913ENSDORG00000001067Pabpc1l9870.913Dipodomys_ordii
ENSNBRG00000016633pabpc1l9576.016ENSETEG00000009969PABPC1L7276.016Echinops_telfairi
ENSNBRG00000016633pabpc1l7283.916ENSEASG00005023408-10084.524Equus_asinus_asinus
ENSNBRG00000016633pabpc1l6374.843ENSEASG00005023407-8263.235Equus_asinus_asinus
ENSNBRG00000016633pabpc1l8166.379ENSECAG00000040139-8366.379Equus_caballus
ENSNBRG00000016633pabpc1l9971.942ENSEEUG00000005978PABPC1L9966.184Erinaceus_europaeus
ENSNBRG00000016633pabpc1l10084.123ENSELUG00000001811pabpc1l9984.123Esox_lucius
ENSNBRG00000016633pabpc1l9973.558ENSFCAG00000011692PABPC1L9873.558Felis_catus
ENSNBRG00000016633pabpc1l8575.926ENSFALG00000005372PABPC1L9171.985Ficedula_albicollis
ENSNBRG00000016633pabpc1l9963.710ENSFDAG00000008291PABPC1L9963.710Fukomys_damarensis
ENSNBRG00000016633pabpc1l10093.735ENSFHEG00000003398pabpc1l9993.735Fundulus_heteroclitus
ENSNBRG00000016633pabpc1l9987.740ENSGMOG00000004437pabpc1l9787.740Gadus_morhua
ENSNBRG00000016633pabpc1l9977.255ENSGALG00000004123PABPC1L9980.048Gallus_gallus
ENSNBRG00000016633pabpc1l10083.435ENSGAFG00000021057pabpc1l10083.435Gambusia_affinis
ENSNBRG00000016633pabpc1l9993.012ENSGACG00000002792pabpc1l9993.012Gasterosteus_aculeatus
ENSNBRG00000016633pabpc1l9976.538ENSGAGG00000000589PABPC1L9379.775Gopherus_agassizii
ENSNBRG00000016633pabpc1l9979.310ENSGGOG00000004584PABPC1L9872.662Gorilla_gorilla
ENSNBRG00000016633pabpc1l10098.562ENSHBUG00000006134pabpc1l10098.562Haplochromis_burtoni
ENSNBRG00000016633pabpc1l10071.277ENSHGLG00000008434PABPC1L9964.809Heterocephalus_glaber_female
ENSNBRG00000016633pabpc1l7087.582ENSHGLG00100019506-10087.079Heterocephalus_glaber_male
ENSNBRG00000016633pabpc1l10071.277ENSHGLG00100012151PABPC1L9964.809Heterocephalus_glaber_male
ENSNBRG00000016633pabpc1l10088.836ENSHCOG00000009270pabpc1l10088.836Hippocampus_comes
ENSNBRG00000016633pabpc1l7058.523ENSIPUG00000006780-9258.523Ictalurus_punctatus
ENSNBRG00000016633pabpc1l10082.494ENSIPUG00000012602pabpc1l9982.494Ictalurus_punctatus
ENSNBRG00000016633pabpc1l7060.843ENSIPUG00000006760-9161.878Ictalurus_punctatus
ENSNBRG00000016633pabpc1l9972.902ENSSTOG00000003739PABPC1L9967.311Ictidomys_tridecemlineatus
ENSNBRG00000016633pabpc1l9953.250ENSJJAG00000022406Pabpc1l9953.250Jaculus_jaculus
ENSNBRG00000016633pabpc1l10092.601ENSKMAG00000016847pabpc1l10087.923Kryptolebias_marmoratus
ENSNBRG00000016633pabpc1l10091.686ENSLBEG00000010084pabpc1l9991.686Labrus_bergylta
ENSNBRG00000016633pabpc1l9979.717ENSLACG00000005762PABPC1L9779.717Latimeria_chalumnae
ENSNBRG00000016633pabpc1l9983.486ENSLOCG00000007519pabpc1l9883.486Lepisosteus_oculatus
ENSNBRG00000016633pabpc1l9977.215ENSLAFG00000003553PABPC1L10067.305Loxodonta_africana
ENSNBRG00000016633pabpc1l9979.310ENSMFAG00000040365PABPC1L9872.902Macaca_fascicularis
ENSNBRG00000016633pabpc1l9777.922ENSMNEG00000032298PABPC1L9872.902Macaca_nemestrina
ENSNBRG00000016633pabpc1l9978.161ENSMLEG00000043139PABPC1L9872.902Mandrillus_leucophaeus
ENSNBRG00000016633pabpc1l9693.494ENSMAMG00000011854pabpc1l9793.494Mastacembelus_armatus
ENSNBRG00000016633pabpc1l10098.403ENSMZEG00005023713pabpc1l10098.403Maylandia_zebra
ENSNBRG00000016633pabpc1l9977.404ENSMGAG00000003674PABPC1L9877.404Meleagris_gallopavo
ENSNBRG00000016633pabpc1l9967.554ENSMOCG00000013186Pabpc1l9967.554Microtus_ochrogaster
ENSNBRG00000016633pabpc1l9991.587ENSMMOG00000020574-9987.742Mola_mola
ENSNBRG00000016633pabpc1l9674.347ENSMODG00000016198PABPC1L9874.347Monodelphis_domestica
ENSNBRG00000016633pabpc1l9691.807ENSMALG00000021622pabpc1l9991.807Monopterus_albus
ENSNBRG00000016633pabpc1l9963.529MGP_CAROLIEiJ_G0024627Pabpc1l9959.609Mus_caroli
ENSNBRG00000016633pabpc1l9963.529ENSMUSG00000054582Pabpc1l9960.320Mus_musculus
ENSNBRG00000016633pabpc1l9964.706MGP_PahariEiJ_G0026071Pabpc1l9960.163Mus_pahari
ENSNBRG00000016633pabpc1l9963.529MGP_SPRETEiJ_G0025549Pabpc1l9959.609Mus_spretus
ENSNBRG00000016633pabpc1l9974.519ENSMPUG00000017646PABPC1L9874.519Mustela_putorius_furo
ENSNBRG00000016633pabpc1l9870.853ENSMLUG00000006324PABPC1L9670.853Myotis_lucifugus
ENSNBRG00000016633pabpc1l9964.680ENSNGAG00000010458Pabpc1l9964.680Nannospalax_galili
ENSNBRG00000016633pabpc1l9064.580ENSMEUG00000007905-8964.580Notamacropus_eugenii
ENSNBRG00000016633pabpc1l9972.902ENSOPRG00000011846PABPC1L9972.902Ochotona_princeps
ENSNBRG00000016633pabpc1l9962.842ENSODEG00000015482PABPC1L9962.842Octodon_degus
ENSNBRG00000016633pabpc1l6589.844ENSODEG00000002920-9781.250Octodon_degus
ENSNBRG00000016633pabpc1l10097.764ENSONIG00000017314pabpc1l10097.764Oreochromis_niloticus
ENSNBRG00000016633pabpc1l9061.947ENSOANG00000015793-10061.947Ornithorhynchus_anatinus
ENSNBRG00000016633pabpc1l9971.223ENSOCUG00000003005PABPC1L9964.506Oryctolagus_cuniculus
ENSNBRG00000016633pabpc1l9892.727ENSORLG00000010322pabpc1l10092.727Oryzias_latipes
ENSNBRG00000016633pabpc1l10091.325ENSORLG00020021193pabpc1l10092.727Oryzias_latipes_hni
ENSNBRG00000016633pabpc1l9892.727ENSORLG00015017018pabpc1l10092.727Oryzias_latipes_hsok
ENSNBRG00000016633pabpc1l10088.889ENSOMEG00000010789pabpc1l10083.969Oryzias_melastigma
ENSNBRG00000016633pabpc1l9973.077ENSOGAG00000032999PABPC1L9973.077Otolemur_garnettii
ENSNBRG00000016633pabpc1l9973.798ENSOARG00000004578PABPC1L9873.798Ovis_aries
ENSNBRG00000016633pabpc1l9979.310ENSPPAG00000039677PABPC1L9872.902Pan_paniscus
ENSNBRG00000016633pabpc1l7265.217ENSPPRG00000019327-9867.593Panthera_pardus
ENSNBRG00000016633pabpc1l9973.558ENSPTIG00000006524PABPC1L9973.558Panthera_tigris_altaica
ENSNBRG00000016633pabpc1l7576.543ENSPTRG00000013531PABPC1L9976.543Pan_troglodytes
ENSNBRG00000016633pabpc1l9978.161ENSPANG00000018788PABPC1L9872.902Papio_anubis
ENSNBRG00000016633pabpc1l6085.849ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSNBRG00000016633pabpc1l10083.693ENSPKIG00000007322pabpc1l9983.693Paramormyrops_kingsleyae
ENSNBRG00000016633pabpc1l7781.299ENSPSIG00000013289PABPC1L9981.295Pelodiscus_sinensis
ENSNBRG00000016633pabpc1l7295.327ENSPMGG00000023117pabpc1l9794.419Periophthalmus_magnuspinnatus
ENSNBRG00000016633pabpc1l6990.741ENSPMGG00000023121-9185.641Periophthalmus_magnuspinnatus
ENSNBRG00000016633pabpc1l9967.626ENSPEMG00000020671Pabpc1l9959.171Peromyscus_maniculatus_bairdii
ENSNBRG00000016633pabpc1l10093.976ENSPFOG00000013241pabpc1l10088.339Poecilia_formosa
ENSNBRG00000016633pabpc1l7299.048ENSPLAG00000023686-9298.462Poecilia_latipinna
ENSNBRG00000016633pabpc1l10093.976ENSPLAG00000017490-10088.179Poecilia_latipinna
ENSNBRG00000016633pabpc1l10093.976ENSPMEG00000007677pabpc1l10088.462Poecilia_mexicana
ENSNBRG00000016633pabpc1l7299.048ENSPMEG00000009185-8898.462Poecilia_mexicana
ENSNBRG00000016633pabpc1l7695.276ENSPREG00000015886pabpc1l10094.903Poecilia_reticulata
ENSNBRG00000016633pabpc1l9979.310ENSPPYG00000011042PABPC1L9772.662Pongo_abelii
ENSNBRG00000016633pabpc1l7082.051ENSPCAG00000011787-7584.375Procavia_capensis
ENSNBRG00000016633pabpc1l9968.599ENSPCOG00000020630PABPC1L9968.599Propithecus_coquereli
ENSNBRG00000016633pabpc1l9971.807ENSPVAG00000012663PABPC1L9871.807Pteropus_vampyrus
ENSNBRG00000016633pabpc1l10099.800ENSPNYG00000004101pabpc1l10099.800Pundamilia_nyererei
ENSNBRG00000016633pabpc1l10072.408ENSPNAG00000021248pabpc1l10072.408Pygocentrus_nattereri
ENSNBRG00000016633pabpc1l9967.874ENSRNOG00000012750Pabpc1l9960.526Rattus_norvegicus
ENSNBRG00000016633pabpc1l9978.161ENSRBIG00000035381PABPC1L9968.277Rhinopithecus_bieti
ENSNBRG00000016633pabpc1l9978.161ENSRROG00000044498PABPC1L9872.422Rhinopithecus_roxellana
ENSNBRG00000016633pabpc1l9969.794ENSSBOG00000009532-9869.794Saimiri_boliviensis_boliviensis
ENSNBRG00000016633pabpc1l9970.513ENSSHAG00000011446PABPC1L10070.513Sarcophilus_harrisii
ENSNBRG00000016633pabpc1l10080.822ENSSFOG00015017304pabpc1l9981.007Scleropages_formosus
ENSNBRG00000016633pabpc1l10093.735ENSSMAG00000010516pabpc1l9898.450Scophthalmus_maximus
ENSNBRG00000016633pabpc1l10093.494ENSSDUG00000014743pabpc1l9993.494Seriola_dumerili
ENSNBRG00000016633pabpc1l9994.165ENSSLDG00000006981pabpc1l9993.659Seriola_lalandi_dorsalis
ENSNBRG00000016633pabpc1l9975.626ENSSPUG00000004233PABPC1L9972.771Sphenodon_punctatus
ENSNBRG00000016633pabpc1l10083.835ENSSPAG00000017137pabpc1l9883.835Stegastes_partitus
ENSNBRG00000016633pabpc1l9968.810ENSSSCG00000007382PABPC1L9968.810Sus_scrofa
ENSNBRG00000016633pabpc1l9974.388ENSTGUG00000005114PABPC1L9874.388Taeniopygia_guttata
ENSNBRG00000016633pabpc1l9786.634ENSTRUG00000011085pabpc1l9786.634Takifugu_rubripes
ENSNBRG00000016633pabpc1l9984.863ENSTNIG00000017903pabpc1l9884.863Tetraodon_nigroviridis
ENSNBRG00000016633pabpc1l9975.655ENSTBEG00000002851PABPC1L7977.055Tupaia_belangeri
ENSNBRG00000016633pabpc1l9371.635ENSTTRG00000007618PABPC1L10066.116Tursiops_truncatus
ENSNBRG00000016633pabpc1l9967.027ENSUAMG00000017682PABPC1L9867.207Ursus_americanus
ENSNBRG00000016633pabpc1l7674.359ENSUMAG00000025436PABPC1L9372.652Ursus_maritimus
ENSNBRG00000016633pabpc1l9875.494ENSVVUG00000018939PABPC1L9875.494Vulpes_vulpes
ENSNBRG00000016633pabpc1l9972.477ENSXETG00000022831pabpc1l9970.654Xenopus_tropicalis
ENSNBRG00000016633pabpc1l9993.253ENSXCOG00000005459pabpc1l9993.617Xiphophorus_couchianus
ENSNBRG00000016633pabpc1l10093.253ENSXMAG00000017135pabpc1l10087.859Xiphophorus_maculatus

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