EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 10291 bases
Position: chrJH422400.1:1250076-1260366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021694	zf-C2H2	PF00096.26	6.7e-18	1	3
ENSNBRP00000021694	zf-C2H2	PF00096.26	6.7e-18	2	3
ENSNBRP00000021694	zf-C2H2	PF00096.26	6.7e-18	3	3
ENSNBRP00000021694	zf-met	PF12874.7	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022278	-	963	-	ENSNBRP00000021694	320 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016639	-	78	48.696	ENSNBRG00000016169	-	81	48.696
ENSNBRG00000016639	-	75	40.426	ENSNBRG00000005805	-	93	40.426
ENSNBRG00000016639	-	56	39.640	ENSNBRG00000000292	znf710b	53	38.136
ENSNBRG00000016639	-	54	43.046	ENSNBRG00000021967	-	72	43.046
ENSNBRG00000016639	-	67	40.336	ENSNBRG00000009815	-	93	40.336
ENSNBRG00000016639	-	52	46.739	ENSNBRG00000016577	si:dkey-182i3.9	93	46.739
ENSNBRG00000016639	-	53	44.068	ENSNBRG00000007602	-	88	44.068
ENSNBRG00000016639	-	59	45.312	ENSNBRG00000024344	-	70	45.312
ENSNBRG00000016639	-	60	51.282	ENSNBRG00000024345	-	88	51.282
ENSNBRG00000016639	-	56	40.496	ENSNBRG00000004792	-	60	40.496
ENSNBRG00000016639	-	50	50.000	ENSNBRG00000006757	-	77	44.928
ENSNBRG00000016639	-	52	39.200	ENSNBRG00000004976	prdm5	72	38.281
ENSNBRG00000016639	-	61	52.542	ENSNBRG00000024066	-	97	52.542
ENSNBRG00000016639	-	52	47.200	ENSNBRG00000024179	-	61	47.200
ENSNBRG00000016639	-	53	48.077	ENSNBRG00000008223	-	71	48.077
ENSNBRG00000016639	-	53	38.211	ENSNBRG00000020830	-	50	38.211
ENSNBRG00000016639	-	58	52.174	ENSNBRG00000002902	-	98	52.174
ENSNBRG00000016639	-	71	46.218	ENSNBRG00000004822	-	50	46.610
ENSNBRG00000016639	-	60	50.000	ENSNBRG00000021247	-	68	50.000
ENSNBRG00000016639	-	80	40.323	ENSNBRG00000004523	-	93	40.323
ENSNBRG00000016639	-	68	38.261	ENSNBRG00000015442	ZNF319	81	38.261
ENSNBRG00000016639	-	53	50.450	ENSNBRG00000000960	-	95	50.450
ENSNBRG00000016639	-	50	44.248	ENSNBRG00000008123	-	79	44.248
ENSNBRG00000016639	-	68	43.119	ENSNBRG00000002571	bcl6b	54	43.119
ENSNBRG00000016639	-	67	46.512	ENSNBRG00000014088	-	99	47.414
ENSNBRG00000016639	-	82	53.846	ENSNBRG00000003124	-	91	53.846
ENSNBRG00000016639	-	53	51.389	ENSNBRG00000001163	-	92	44.355
ENSNBRG00000016639	-	53	54.701	ENSNBRG00000006125	-	91	54.701
ENSNBRG00000016639	-	52	41.026	ENSNBRG00000004557	-	85	40.678
ENSNBRG00000016639	-	85	52.000	ENSNBRG00000016282	-	98	52.041
ENSNBRG00000016639	-	78	41.600	ENSNBRG00000015652	-	92	48.352
ENSNBRG00000016639	-	51	47.059	ENSNBRG00000013583	-	92	47.059
ENSNBRG00000016639	-	57	39.259	ENSNBRG00000010987	-	86	39.259
ENSNBRG00000016639	-	50	51.087	ENSNBRG00000010405	-	83	59.091
ENSNBRG00000016639	-	53	45.455	ENSNBRG00000016234	-	69	45.455
ENSNBRG00000016639	-	55	43.434	ENSNBRG00000016582	-	84	43.434
ENSNBRG00000016639	-	61	43.802	ENSNBRG00000016550	-	85	43.802
ENSNBRG00000016639	-	55	43.182	ENSNBRG00000008827	znf319b	86	43.182
ENSNBRG00000016639	-	53	43.103	ENSNBRG00000005823	-	75	43.103
ENSNBRG00000016639	-	50	38.129	ENSNBRG00000024293	-	85	38.129
ENSNBRG00000016639	-	52	46.296	ENSNBRG00000003250	-	91	46.296
ENSNBRG00000016639	-	61	49.587	ENSNBRG00000000577	-	98	49.587
ENSNBRG00000016639	-	54	50.435	ENSNBRG00000000523	-	69	50.435
ENSNBRG00000016639	-	57	42.857	ENSNBRG00000021998	-	74	42.857
ENSNBRG00000016639	-	57	41.748	ENSNBRG00000009811	-	85	41.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016639	-	73	33.548	ENSAPOG00000021966	-	62	33.548	Acanthochromis_polyacanthus
ENSNBRG00000016639	-	52	48.696	ENSACIG00000022738	-	94	41.228	Amphilophus_citrinellus
ENSNBRG00000016639	-	68	36.719	ENSACIG00000007096	-	95	36.719	Amphilophus_citrinellus
ENSNBRG00000016639	-	68	44.048	ENSAOCG00000022529	-	62	44.048	Amphiprion_ocellaris
ENSNBRG00000016639	-	55	78.409	ENSATEG00000014684	-	94	90.299	Anabas_testudineus
ENSNBRG00000016639	-	65	39.161	ENSATEG00000021602	-	90	39.161	Anabas_testudineus
ENSNBRG00000016639	-	51	40.157	ENSACLG00000022482	-	80	40.157	Astatotilapia_calliptera
ENSNBRG00000016639	-	56	43.478	ENSACLG00000019482	-	82	43.478	Astatotilapia_calliptera
ENSNBRG00000016639	-	54	42.857	ENSACLG00000006718	-	82	36.047	Astatotilapia_calliptera
ENSNBRG00000016639	-	52	47.200	ENSACLG00000015462	-	61	47.200	Astatotilapia_calliptera
ENSNBRG00000016639	-	56	40.323	ENSACLG00000008374	-	57	40.323	Astatotilapia_calliptera
ENSNBRG00000016639	-	52	42.373	ENSACLG00000019349	-	74	42.373	Astatotilapia_calliptera
ENSNBRG00000016639	-	54	42.857	ENSACLG00000020333	-	82	36.047	Astatotilapia_calliptera
ENSNBRG00000016639	-	63	46.341	ENSAMXG00000007973	-	93	46.341	Astyanax_mexicanus
ENSNBRG00000016639	-	73	35.172	ENSCSEG00000019848	-	71	41.667	Cynoglossus_semilaevis
ENSNBRG00000016639	-	52	72.174	ENSCVAG00000010887	-	55	72.174	Cyprinodon_variegatus
ENSNBRG00000016639	-	52	45.600	ENSELUG00000004677	-	59	45.600	Esox_lucius
ENSNBRG00000016639	-	51	46.154	ENSGAFG00000001481	-	80	45.161	Gambusia_affinis
ENSNBRG00000016639	-	52	47.200	ENSHBUG00000019377	-	61	47.200	Haplochromis_burtoni
ENSNBRG00000016639	-	65	46.552	ENSIPUG00000022266	ZNF135	74	46.552	Ictalurus_punctatus
ENSNBRG00000016639	-	50	56.410	ENSKMAG00000000802	-	74	56.410	Kryptolebias_marmoratus
ENSNBRG00000016639	-	71	44.800	ENSKMAG00000015304	-	69	44.800	Kryptolebias_marmoratus
ENSNBRG00000016639	-	54	72.289	ENSLBEG00000009663	-	52	72.289	Labrus_bergylta
ENSNBRG00000016639	-	63	85.088	ENSLBEG00000026457	-	96	85.088	Labrus_bergylta
ENSNBRG00000016639	-	58	37.903	ENSLBEG00000008850	-	66	37.903	Labrus_bergylta
ENSNBRG00000016639	-	50	46.154	ENSMZEG00005023565	-	81	46.154	Maylandia_zebra
ENSNBRG00000016639	-	52	47.200	ENSMZEG00005018502	-	61	47.200	Maylandia_zebra
ENSNBRG00000016639	-	55	41.129	ENSMZEG00005022884	-	89	41.129	Maylandia_zebra
ENSNBRG00000016639	-	53	43.902	ENSMZEG00005025965	-	57	43.902	Maylandia_zebra
ENSNBRG00000016639	-	51	46.400	ENSMMOG00000009252	-	64	46.400	Mola_mola
ENSNBRG00000016639	-	54	48.454	ENSONIG00000020667	-	97	48.454	Oreochromis_niloticus
ENSNBRG00000016639	-	88	63.934	ENSONIG00000012374	-	98	90.000	Oreochromis_niloticus
ENSNBRG00000016639	-	52	47.934	ENSONIG00000019139	-	100	47.934	Oreochromis_niloticus
ENSNBRG00000016639	-	52	45.217	ENSOMEG00000015179	-	64	45.217	Oryzias_melastigma
ENSNBRG00000016639	-	66	53.043	ENSPFOG00000018771	-	65	53.043	Poecilia_formosa
ENSNBRG00000016639	-	52	42.202	ENSPMEG00000020864	-	81	42.202	Poecilia_mexicana
ENSNBRG00000016639	-	50	48.780	ENSPNAG00000025882	-	63	45.299	Pygocentrus_nattereri
ENSNBRG00000016639	-	53	49.057	ENSSMAG00000013828	-	60	49.057	Scophthalmus_maximus
ENSNBRG00000016639	-	74	54.023	ENSSMAG00000013663	-	87	54.023	Scophthalmus_maximus
ENSNBRG00000016639	-	54	43.220	ENSSMAG00000006155	-	58	43.220	Scophthalmus_maximus
ENSNBRG00000016639	-	52	47.170	ENSSDUG00000015013	-	64	47.170	Seriola_dumerili
ENSNBRG00000016639	-	52	50.538	ENSSDUG00000023765	-	85	50.538	Seriola_dumerili
ENSNBRG00000016639	-	69	47.170	ENSSLDG00000021278	-	75	47.170	Seriola_lalandi_dorsalis
ENSNBRG00000016639	-	79	92.473	ENSSPAG00000008950	-	75	92.473	Stegastes_partitus
ENSNBRG00000016639	-	52	48.305	ENSTNIG00000002344	-	100	48.305	Tetraodon_nigroviridis
ENSNBRG00000016639	-	58	53.165	ENSXCOG00000012064	-	60	53.165	Xiphophorus_couchianus
ENSNBRG00000016639	-	53	61.667	ENSXMAG00000022894	-	69	61.667	Xiphophorus_maculatus
ENSNBRG00000016639	-	66	50.435	ENSXMAG00000024973	-	67	50.435	Xiphophorus_maculatus