EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016666 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 214000 bases
Position: chrJH422449.1:561104-775103
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	1	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	2	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	3	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	4	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	5	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	6	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	7	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	8	9
ENSNBRP00000021772	zf-C2H2	PF00096.26	1.3e-49	9	9
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	1	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	2	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	3	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	4	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	5	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	6	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	7	8
ENSNBRP00000021749	zf-C2H2	PF00096.26	3.8e-40	8	8
ENSNBRP00000021797	zf-C2H2	PF00096.26	2.2e-26	1	5
ENSNBRP00000021797	zf-C2H2	PF00096.26	2.2e-26	2	5
ENSNBRP00000021797	zf-C2H2	PF00096.26	2.2e-26	3	5
ENSNBRP00000021797	zf-C2H2	PF00096.26	2.2e-26	4	5
ENSNBRP00000021797	zf-C2H2	PF00096.26	2.2e-26	5	5
ENSNBRP00000021733	zf-C2H2	PF00096.26	5.1e-06	1	1
ENSNBRP00000021772	zf-met	PF12874.7	1.7e-10	1	1
ENSNBRP00000021749	zf-met	PF12874.7	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022333	-	1047	-	ENSNBRP00000021749	348 (aa)	-	-
ENSNBRT00000022381	-	768	-	ENSNBRP00000021797	255 (aa)	-	-
ENSNBRT00000022317	-	198	-	ENSNBRP00000021733	65 (aa)	-	-
ENSNBRT00000022356	-	1164	-	ENSNBRP00000021772	387 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016666	-	96	46.154	ENSNBRG00000024086	-	62	47.321
ENSNBRG00000016666	-	98	58.824	ENSNBRG00000019481	-	98	47.445
ENSNBRG00000016666	-	97	42.857	ENSNBRG00000005805	-	94	42.857
ENSNBRG00000016666	-	94	56.522	ENSNBRG00000013604	-	82	40.094
ENSNBRG00000016666	-	96	49.558	ENSNBRG00000004381	-	93	47.368
ENSNBRG00000016666	-	99	41.139	ENSNBRG00000004523	-	96	40.969
ENSNBRG00000016666	-	96	45.600	ENSNBRG00000021998	-	87	39.062
ENSNBRG00000016666	-	97	49.841	ENSNBRG00000006125	-	98	48.699
ENSNBRG00000016666	-	97	39.130	ENSNBRG00000018141	-	53	39.130
ENSNBRG00000016666	-	98	49.558	ENSNBRG00000024014	-	81	44.737
ENSNBRG00000016666	-	98	52.174	ENSNBRG00000024019	-	97	43.103
ENSNBRG00000016666	-	96	44.944	ENSNBRG00000019004	-	72	43.966
ENSNBRG00000016666	-	96	42.647	ENSNBRG00000002673	gfi1aa	53	42.647
ENSNBRG00000016666	-	98	65.217	ENSNBRG00000016282	-	98	51.786
ENSNBRG00000016666	-	100	36.036	ENSNBRG00000022534	znf646	88	36.036
ENSNBRG00000016666	-	98	40.400	ENSNBRG00000016564	-	85	41.346
ENSNBRG00000016666	-	96	40.000	ENSNBRG00000009279	-	92	38.372
ENSNBRG00000016666	-	97	45.413	ENSNBRG00000021375	-	56	38.645
ENSNBRG00000016666	-	96	39.496	ENSNBRG00000007221	scrt2	58	40.171
ENSNBRG00000016666	-	91	54.545	ENSNBRG00000010194	-	80	46.541
ENSNBRG00000016666	-	96	39.216	ENSNBRG00000021967	-	74	37.209
ENSNBRG00000016666	-	99	46.341	ENSNBRG00000021237	-	93	40.418
ENSNBRG00000016666	-	98	50.000	ENSNBRG00000006112	-	56	48.454
ENSNBRG00000016666	-	97	40.525	ENSNBRG00000004557	-	86	43.299
ENSNBRG00000016666	-	98	58.696	ENSNBRG00000007311	-	89	49.541
ENSNBRG00000016666	-	98	42.584	ENSNBRG00000021960	zbtb17	64	43.396
ENSNBRG00000016666	-	97	38.667	ENSNBRG00000024051	-	50	38.342
ENSNBRG00000016666	-	97	43.541	ENSNBRG00000024054	-	60	46.154
ENSNBRG00000016666	-	97	48.018	ENSNBRG00000007384	-	53	48.018
ENSNBRG00000016666	-	96	51.408	ENSNBRG00000021247	-	56	38.462
ENSNBRG00000016666	-	95	45.679	ENSNBRG00000001608	-	97	42.908
ENSNBRG00000016666	-	97	40.923	ENSNBRG00000009815	-	88	40.336
ENSNBRG00000016666	-	97	37.710	ENSNBRG00000009811	-	86	41.818
ENSNBRG00000016666	-	99	47.020	ENSNBRG00000024344	-	83	44.326
ENSNBRG00000016666	-	97	46.875	ENSNBRG00000024345	-	98	48.387
ENSNBRG00000016666	-	91	51.724	ENSNBRG00000001813	-	53	37.410
ENSNBRG00000016666	-	97	46.667	ENSNBRG00000006445	-	53	40.541
ENSNBRG00000016666	-	98	44.248	ENSNBRG00000010351	-	98	47.619
ENSNBRG00000016666	-	98	43.750	ENSNBRG00000009075	znf236	81	42.222
ENSNBRG00000016666	-	98	47.244	ENSNBRG00000006757	-	93	42.647
ENSNBRG00000016666	-	97	40.000	ENSNBRG00000011785	snai2	89	46.667
ENSNBRG00000016666	-	97	50.971	ENSNBRG00000000523	-	75	48.889
ENSNBRG00000016666	-	97	51.250	ENSNBRG00000013838	-	76	51.250
ENSNBRG00000016666	-	94	49.107	ENSNBRG00000019770	-	92	46.341
ENSNBRG00000016666	-	89	55.882	ENSNBRG00000000321	-	94	50.000
ENSNBRG00000016666	-	98	50.000	ENSNBRG00000024066	-	99	40.433
ENSNBRG00000016666	-	97	53.719	ENSNBRG00000000793	-	100	55.844
ENSNBRG00000016666	-	98	43.617	ENSNBRG00000006411	-	90	46.835
ENSNBRG00000016666	-	97	63.077	ENSNBRG00000015873	-	99	51.546
ENSNBRG00000016666	-	96	51.220	ENSNBRG00000002902	-	97	51.220
ENSNBRG00000016666	-	92	45.122	ENSNBRG00000020314	si:dkey-89b17.4	91	40.179
ENSNBRG00000016666	-	73	50.000	ENSNBRG00000017383	-	76	53.488
ENSNBRG00000016666	-	97	43.506	ENSNBRG00000008123	-	79	43.506
ENSNBRG00000016666	-	96	41.729	ENSNBRG00000021355	-	98	41.729
ENSNBRG00000016666	-	97	37.870	ENSNBRG00000024293	-	86	43.697
ENSNBRG00000016666	-	97	68.750	ENSNBRG00000003124	-	97	46.626
ENSNBRG00000016666	-	99	40.956	ENSNBRG00000005823	-	89	40.956
ENSNBRG00000016666	-	99	41.176	ENSNBRG00000018718	zbtb47b	77	41.176
ENSNBRG00000016666	-	97	53.125	ENSNBRG00000003000	-	81	47.297
ENSNBRG00000016666	-	92	56.250	ENSNBRG00000004792	-	60	51.020
ENSNBRG00000016666	-	96	40.678	ENSNBRG00000001834	-	99	40.678
ENSNBRG00000016666	-	96	49.123	ENSNBRG00000020159	znf526	88	34.746
ENSNBRG00000016666	-	97	41.850	ENSNBRG00000005796	-	92	44.286
ENSNBRG00000016666	-	91	36.893	ENSNBRG00000014403	-	66	36.893
ENSNBRG00000016666	-	97	47.183	ENSNBRG00000016219	-	99	46.269
ENSNBRG00000016666	-	97	43.231	ENSNBRG00000009128	-	60	42.056
ENSNBRG00000016666	-	94	57.576	ENSNBRG00000015652	-	95	40.887
ENSNBRG00000016666	-	96	40.887	ENSNBRG00000019987	GZF1	59	44.545
ENSNBRG00000016666	-	96	42.647	ENSNBRG00000004723	-	92	42.135
ENSNBRG00000016666	-	97	39.316	ENSNBRG00000012376	-	100	39.316
ENSNBRG00000016666	-	97	48.000	ENSNBRG00000024048	-	85	46.729
ENSNBRG00000016666	-	97	35.912	ENSNBRG00000015442	ZNF319	87	37.838
ENSNBRG00000016666	-	97	47.059	ENSNBRG00000024046	-	55	47.059
ENSNBRG00000016666	-	97	65.625	ENSNBRG00000024354	-	96	48.780
ENSNBRG00000016666	-	96	34.800	ENSNBRG00000005175	zbtb41	75	33.632
ENSNBRG00000016666	-	98	61.765	ENSNBRG00000014088	-	99	51.613
ENSNBRG00000016666	-	98	40.506	ENSNBRG00000008106	-	96	39.161
ENSNBRG00000016666	-	97	58.974	ENSNBRG00000000960	-	99	51.724
ENSNBRG00000016666	-	94	48.101	ENSNBRG00000016577	si:dkey-182i3.9	93	40.244
ENSNBRG00000016666	-	96	45.894	ENSNBRG00000007602	-	94	41.993
ENSNBRG00000016666	-	98	44.231	ENSNBRG00000001761	-	68	43.787
ENSNBRG00000016666	-	97	49.270	ENSNBRG00000001163	-	98	47.857
ENSNBRG00000016666	-	94	55.882	ENSNBRG00000016603	-	88	47.368
ENSNBRG00000016666	-	97	40.367	ENSNBRG00000020034	znf652	54	41.451
ENSNBRG00000016666	-	97	47.445	ENSNBRG00000023956	-	61	47.445
ENSNBRG00000016666	-	99	47.143	ENSNBRG00000001641	-	90	40.887
ENSNBRG00000016666	-	97	49.655	ENSNBRG00000013501	-	86	56.897
ENSNBRG00000016666	-	97	49.724	ENSNBRG00000000492	-	83	46.465
ENSNBRG00000016666	-	97	34.835	ENSNBRG00000008827	znf319b	98	36.466
ENSNBRG00000016666	-	97	47.980	ENSNBRG00000013583	-	91	58.730
ENSNBRG00000016666	-	97	49.558	ENSNBRG00000016234	-	82	43.956
ENSNBRG00000016666	-	96	43.103	ENSNBRG00000012391	gfi1b	65	43.103
ENSNBRG00000016666	-	97	40.244	ENSNBRG00000010987	-	86	36.098
ENSNBRG00000016666	-	96	42.857	ENSNBRG00000013983	scrt1b	60	42.857
ENSNBRG00000016666	-	96	47.059	ENSNBRG00000023229	-	78	57.447
ENSNBRG00000016666	-	97	43.350	ENSNBRG00000024020	-	62	41.250
ENSNBRG00000016666	-	92	42.169	ENSNBRG00000004976	prdm5	72	42.520
ENSNBRG00000016666	-	96	43.986	ENSNBRG00000024179	-	68	42.222
ENSNBRG00000016666	-	97	42.982	ENSNBRG00000023960	-	73	40.167
ENSNBRG00000016666	-	90	30.583	ENSNBRG00000020685	hinfp	52	33.043
ENSNBRG00000016666	-	82	48.387	ENSNBRG00000016034	sall3b	50	54.717
ENSNBRG00000016666	-	96	38.554	ENSNBRG00000016032	patz1	62	32.231
ENSNBRG00000016666	-	97	41.600	ENSNBRG00000016582	-	90	41.600
ENSNBRG00000016666	-	96	47.887	ENSNBRG00000016169	-	74	47.887
ENSNBRG00000016666	-	96	42.017	ENSNBRG00000014882	-	81	35.338
ENSNBRG00000016666	-	98	37.574	ENSNBRG00000002946	-	56	38.889
ENSNBRG00000016666	-	94	53.030	ENSNBRG00000010405	-	86	52.273
ENSNBRG00000016666	-	95	49.296	ENSNBRG00000022241	-	90	49.296
ENSNBRG00000016666	-	97	43.494	ENSNBRG00000016550	-	88	43.494
ENSNBRG00000016666	-	96	46.939	ENSNBRG00000008223	-	86	46.939
ENSNBRG00000016666	-	97	38.356	ENSNBRG00000024294	-	69	38.356
ENSNBRG00000016666	-	97	48.936	ENSNBRG00000005849	-	96	40.693
ENSNBRG00000016666	-	97	38.843	ENSNBRG00000007276	-	76	38.843
ENSNBRG00000016666	-	91	61.765	ENSNBRG00000004822	-	62	46.071
ENSNBRG00000016666	-	99	44.681	ENSNBRG00000003250	-	95	44.000
ENSNBRG00000016666	-	91	58.696	ENSNBRG00000000577	-	82	46.073
ENSNBRG00000016666	-	99	46.988	ENSNBRG00000002542	-	83	50.943
ENSNBRG00000016666	-	95	53.191	ENSNBRG00000000708	-	92	48.529
ENSNBRG00000016666	-	98	34.459	ENSNBRG00000018449	PRDM15	57	35.802
ENSNBRG00000016666	-	96	44.223	ENSNBRG00000000305	-	84	44.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016666	-	97	46.705	ENSACAG00000022748	-	63	47.368	Anolis_carolinensis
ENSNBRG00000016666	-	97	45.912	ENSAMXG00000033201	-	97	46.595	Astyanax_mexicanus
ENSNBRG00000016666	-	96	47.692	ENSAMXG00000038905	-	91	51.240	Astyanax_mexicanus
ENSNBRG00000016666	-	99	47.368	ENSAMXG00000029109	-	92	48.241	Astyanax_mexicanus
ENSNBRG00000016666	-	97	43.860	ENSPMAG00000007500	ZNF436	99	43.860	Petromyzon_marinus
ENSNBRG00000016666	-	97	47.783	ENSPNAG00000017468	-	95	46.479	Pygocentrus_nattereri
ENSNBRG00000016666	-	97	48.052	ENSPNAG00000021075	-	96	48.052	Pygocentrus_nattereri
ENSNBRG00000016666	-	95	54.348	ENSPNAG00000009164	-	90	49.191	Pygocentrus_nattereri