EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016744 (Gene tree)
Gene ID: -
Gene Symbol: rreb1a
Alias: id:ibd1338|si:ch211-266d19.3
Full Name: ras-responsive element-binding protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 16834 bases
Position: chrJH422491.1:164146-180979
Accession: 102794492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021922	zf-C2H2	PF00096.26	1.8e-28	1	4
ENSNBRP00000021922	zf-C2H2	PF00096.26	1.8e-28	2	4
ENSNBRP00000021922	zf-C2H2	PF00096.26	1.8e-28	3	4
ENSNBRP00000021922	zf-C2H2	PF00096.26	1.8e-28	4	4
ENSNBRP00000021937	zf-C2H2	PF00096.26	1.6e-15	1	3
ENSNBRP00000021937	zf-C2H2	PF00096.26	1.6e-15	2	3
ENSNBRP00000021937	zf-C2H2	PF00096.26	1.6e-15	3	3
ENSNBRP00000021937	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022507	-	3489	XM_006808253	ENSNBRP00000021922	1162 (aa)	XP_006808316	-
ENSNBRT00000022522	-	1821	-	ENSNBRP00000021937	606 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000016744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016744	rreb1a	59	35.000	ENSNBRG00000009075	znf236	54	48.980
ENSNBRG00000016744	rreb1a	52	48.148	ENSNBRG00000021237	-	58	47.273
ENSNBRG00000016744	rreb1a	58	51.020	ENSNBRG00000015873	-	86	51.020
ENSNBRG00000016744	rreb1a	58	50.000	ENSNBRG00000014088	-	98	51.020
ENSNBRG00000016744	rreb1a	55	48.980	ENSNBRG00000016282	-	90	51.020
ENSNBRG00000016744	rreb1a	53	53.061	ENSNBRG00000003124	-	94	46.939
ENSNBRG00000016744	rreb1a	53	51.020	ENSNBRG00000000960	-	94	51.020
ENSNBRG00000016744	rreb1a	50	46.429	ENSNBRG00000001163	-	89	48.980
ENSNBRG00000016744	rreb1a	52	48.980	ENSNBRG00000002902	-	89	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016744	rreb1a	85	54.082	ENSG00000124782	RREB1	74	72.143	Homo_sapiens
ENSNBRG00000016744	rreb1a	65	62.408	ENSAPEG00000002682	-	52	75.758	Amphiprion_percula
ENSNBRG00000016744	rreb1a	92	53.618	ENSAPLG00000004726	RREB1	65	56.044	Anas_platyrhynchos
ENSNBRG00000016744	rreb1a	91	58.889	ENSACAG00000000520	RREB1	61	58.889	Anolis_carolinensis
ENSNBRG00000016744	rreb1a	85	58.571	ENSANAG00000029040	RREB1	64	54.321	Aotus_nancymaae
ENSNBRG00000016744	rreb1a	85	58.511	ENSAMXG00000015314	rreb1b	53	60.638	Astyanax_mexicanus
ENSNBRG00000016744	rreb1a	99	54.098	ENSAMXG00000019028	rreb1a	80	57.067	Astyanax_mexicanus
ENSNBRG00000016744	rreb1a	85	60.000	ENSCJAG00000021358	RREB1	57	69.767	Callithrix_jacchus
ENSNBRG00000016744	rreb1a	87	53.061	ENSCAFG00000009527	RREB1	71	53.608	Canis_familiaris
ENSNBRG00000016744	rreb1a	90	51.429	ENSCAFG00020013260	RREB1	64	53.125	Canis_lupus_dingo
ENSNBRG00000016744	rreb1a	89	50.962	ENSCCAG00000021905	RREB1	57	69.767	Cebus_capucinus
ENSNBRG00000016744	rreb1a	85	54.082	ENSCATG00000043662	RREB1	61	67.553	Cercocebus_atys
ENSNBRG00000016744	rreb1a	81	54.082	ENSCSAG00000007376	RREB1	65	54.082	Chlorocebus_sabaeus
ENSNBRG00000016744	rreb1a	96	61.111	ENSCPBG00000008709	RREB1	68	61.111	Chrysemys_picta_bellii
ENSNBRG00000016744	rreb1a	85	53.061	ENSCANG00000032835	RREB1	69	51.961	Colobus_angolensis_palliatus
ENSNBRG00000016744	rreb1a	98	75.916	ENSCSEG00000018342	rreb1a	56	82.353	Cynoglossus_semilaevis
ENSNBRG00000016744	rreb1a	99	62.228	ENSDARG00000063701	rreb1a	72	62.000	Danio_rerio
ENSNBRG00000016744	rreb1a	82	52.751	ENSDORG00000006979	Rreb1	58	68.063	Dipodomys_ordii
ENSNBRG00000016744	rreb1a	96	48.459	ENSEASG00005012054	RREB1	54	68.085	Equus_asinus_asinus
ENSNBRG00000016744	rreb1a	96	48.179	ENSECAG00000018169	RREB1	54	67.553	Equus_caballus
ENSNBRG00000016744	rreb1a	92	56.014	ENSFALG00000013231	RREB1	62	55.017	Ficedula_albicollis
ENSNBRG00000016744	rreb1a	70	57.988	ENSFDAG00000004213	RREB1	56	57.988	Fukomys_damarensis
ENSNBRG00000016744	rreb1a	92	55.102	ENSGALG00000012799	RREB1	64	57.303	Gallus_gallus
ENSNBRG00000016744	rreb1a	81	60.000	ENSGAGG00000002213	RREB1	65	60.000	Gopherus_agassizii
ENSNBRG00000016744	rreb1a	84	51.466	ENSGGOG00000004561	RREB1	65	54.082	Gorilla_gorilla
ENSNBRG00000016744	rreb1a	99	68.165	ENSLBEG00000013512	rreb1a	69	80.214	Labrus_bergylta
ENSNBRG00000016744	rreb1a	86	48.936	ENSLACG00000009283	RREB1	69	56.842	Latimeria_chalumnae
ENSNBRG00000016744	rreb1a	93	64.835	ENSLOCG00000011702	rreb1b	66	64.835	Lepisosteus_oculatus
ENSNBRG00000016744	rreb1a	82	52.581	ENSLAFG00000005300	RREB1	65	51.020	Loxodonta_africana
ENSNBRG00000016744	rreb1a	85	54.082	ENSMFAG00000000389	RREB1	61	67.553	Macaca_fascicularis
ENSNBRG00000016744	rreb1a	85	54.082	ENSMMUG00000007852	RREB1	61	67.553	Macaca_mulatta
ENSNBRG00000016744	rreb1a	85	54.082	ENSMNEG00000038556	RREB1	61	67.553	Macaca_nemestrina
ENSNBRG00000016744	rreb1a	85	54.082	ENSMLEG00000040965	RREB1	61	67.553	Mandrillus_leucophaeus
ENSNBRG00000016744	rreb1a	92	53.618	ENSMGAG00000003910	RREB1	64	55.056	Meleagris_gallopavo
ENSNBRG00000016744	rreb1a	96	50.485	ENSMICG00000003683	RREB1	63	55.914	Microcebus_murinus
ENSNBRG00000016744	rreb1a	92	53.684	ENSMODG00000009892	RREB1	70	54.255	Monodelphis_domestica
ENSNBRG00000016744	rreb1a	92	53.595	ENSMPUG00000000558	RREB1	71	52.041	Mustela_putorius_furo
ENSNBRG00000016744	rreb1a	92	50.000	ENSMLUG00000013153	RREB1	61	67.553	Myotis_lucifugus
ENSNBRG00000016744	rreb1a	92	46.484	ENSNGAG00000021506	Rreb1	68	52.577	Nannospalax_galili
ENSNBRG00000016744	rreb1a	81	54.082	ENSNLEG00000011554	RREB1	59	61.165	Nomascus_leucogenys
ENSNBRG00000016744	rreb1a	91	56.522	ENSMEUG00000015377	RREB1	69	56.522	Notamacropus_eugenii
ENSNBRG00000016744	rreb1a	76	51.084	ENSODEG00000007124	RREB1	60	52.083	Octodon_degus
ENSNBRG00000016744	rreb1a	91	75.000	ENSOMEG00000001389	rreb1a	79	73.514	Oryzias_melastigma
ENSNBRG00000016744	rreb1a	79	46.335	ENSOGAG00000025755	RREB1	50	61.165	Otolemur_garnettii
ENSNBRG00000016744	rreb1a	84	51.140	ENSPPAG00000037017	RREB1	65	54.082	Pan_paniscus
ENSNBRG00000016744	rreb1a	87	47.266	ENSPPRG00000012144	RREB1	72	52.041	Panthera_pardus
ENSNBRG00000016744	rreb1a	84	51.140	ENSPTRG00000017697	RREB1	65	53.061	Pan_troglodytes
ENSNBRG00000016744	rreb1a	85	54.082	ENSPANG00000019553	RREB1	61	67.553	Papio_anubis
ENSNBRG00000016744	rreb1a	99	55.851	ENSPKIG00000006372	rreb1b	72	60.927	Paramormyrops_kingsleyae
ENSNBRG00000016744	rreb1a	91	57.732	ENSPSIG00000006582	RREB1	63	60.674	Pelodiscus_sinensis
ENSNBRG00000016744	rreb1a	88	53.608	ENSPEMG00000014153	Rreb1	63	53.125	Peromyscus_maniculatus_bairdii
ENSNBRG00000016744	rreb1a	81	59.184	ENSPCIG00000012644	RREB1	64	58.511	Phascolarctos_cinereus
ENSNBRG00000016744	rreb1a	81	54.082	ENSPPYG00000016204	RREB1	65	54.082	Pongo_abelii
ENSNBRG00000016744	rreb1a	86	47.324	ENSPCOG00000014821	RREB1	56	68.085	Propithecus_coquereli
ENSNBRG00000016744	rreb1a	100	46.154	ENSPVAG00000014081	RREB1	69	54.082	Pteropus_vampyrus
ENSNBRG00000016744	rreb1a	98	63.366	ENSPNAG00000000486	rreb1a	80	63.366	Pygocentrus_nattereri
ENSNBRG00000016744	rreb1a	91	53.608	ENSRNOG00000015701	Rreb1	67	54.167	Rattus_norvegicus
ENSNBRG00000016744	rreb1a	81	54.082	ENSRROG00000039603	RREB1	58	67.553	Rhinopithecus_roxellana
ENSNBRG00000016744	rreb1a	85	60.000	ENSSBOG00000025257	RREB1	57	69.767	Saimiri_boliviensis_boliviensis
ENSNBRG00000016744	rreb1a	92	53.355	ENSSHAG00000005295	RREB1	64	68.421	Sarcophilus_harrisii
ENSNBRG00000016744	rreb1a	86	62.887	ENSSFOG00015001117	rreb1b	63	62.887	Scleropages_formosus
ENSNBRG00000016744	rreb1a	92	51.411	ENSSPUG00000007686	RREB1	78	51.282	Sphenodon_punctatus
ENSNBRG00000016744	rreb1a	92	51.515	ENSTGUG00000002309	RREB1	65	73.418	Taeniopygia_guttata
ENSNBRG00000016744	rreb1a	82	53.722	ENSUAMG00000003741	RREB1	62	54.082	Ursus_americanus
ENSNBRG00000016744	rreb1a	87	53.061	ENSVVUG00000005050	RREB1	62	53.125	Vulpes_vulpes
ENSNBRG00000016744	rreb1a	90	46.154	ENSXETG00000015435	rreb1	67	74.118	Xenopus_tropicalis