EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000016799 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC102776635
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6211 bases
Position: chrJH422400.1:1596474-1602684
Accession: 102776635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021887	MMR_HSR1	PF01926.23	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022471	-	1713	XM_006804617	ENSNBRP00000021887	570 (aa)	XP_006804680	-

Gene Model

Click here to download ENSNBRG00000016799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000016799	-	84	32.784	ENSNBRG00000005816	-	84	32.922
ENSNBRG00000016799	-	89	56.607	ENSNBRG00000024356	-	94	57.086
ENSNBRG00000016799	-	90	63.548	ENSNBRG00000022926	-	91	63.548
ENSNBRG00000016799	-	88	34.185	ENSNBRG00000024250	-	90	34.185
ENSNBRG00000016799	-	90	35.962	ENSNBRG00000005828	-	94	36.154
ENSNBRG00000016799	-	86	36.273	ENSNBRG00000014062	-	91	36.895
ENSNBRG00000016799	-	86	34.538	ENSNBRG00000016241	-	92	34.538
ENSNBRG00000016799	-	84	35.294	ENSNBRG00000017986	-	89	35.700
ENSNBRG00000016799	-	88	35.953	ENSNBRG00000009283	-	89	35.560
ENSNBRG00000016799	-	85	34.146	ENSNBRG00000003360	-	86	33.537
ENSNBRG00000016799	-	84	34.702	ENSNBRG00000006556	-	87	34.702
ENSNBRG00000016799	-	87	83.099	ENSNBRG00000022932	-	88	82.897
ENSNBRG00000016799	-	89	34.100	ENSNBRG00000024248	-	98	34.483
ENSNBRG00000016799	-	51	40.203	ENSNBRG00000006565	-	87	40.203
ENSNBRG00000016799	-	92	34.888	ENSNBRG00000005113	-	93	34.888
ENSNBRG00000016799	-	80	37.500	ENSNBRG00000005118	-	98	36.831
ENSNBRG00000016799	-	90	63.158	ENSNBRG00000016776	-	90	63.158
ENSNBRG00000016799	-	86	86.410	ENSNBRG00000016760	-	96	86.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016799	-	86	63.136	ENSAPOG00000015792	-	86	62.933	Acanthochromis_polyacanthus
ENSNBRG00000016799	-	89	61.961	ENSAPOG00000015784	-	83	61.765	Acanthochromis_polyacanthus
ENSNBRG00000016799	-	86	78.138	ENSACIG00000022228	-	83	77.935	Amphilophus_citrinellus
ENSNBRG00000016799	-	93	75.564	ENSACIG00000009923	-	85	75.752	Amphilophus_citrinellus
ENSNBRG00000016799	-	89	68.431	ENSAPEG00000005793	-	94	68.235	Amphiprion_percula
ENSNBRG00000016799	-	95	69.131	ENSATEG00000009097	-	90	68.577	Anabas_testudineus
ENSNBRG00000016799	-	95	82.721	ENSACLG00000023474	-	97	82.904	Astatotilapia_calliptera
ENSNBRG00000016799	-	93	78.947	ENSACLG00000023481	-	95	78.759	Astatotilapia_calliptera
ENSNBRG00000016799	-	94	59.888	ENSCVAG00000018327	-	89	59.888	Cyprinodon_variegatus
ENSNBRG00000016799	-	95	69.780	ENSFHEG00000021969	-	97	69.414	Fundulus_heteroclitus
ENSNBRG00000016799	-	93	58.083	ENSFHEG00000008149	-	80	57.707	Fundulus_heteroclitus
ENSNBRG00000016799	-	94	57.276	ENSFHEG00000011074	-	82	56.903	Fundulus_heteroclitus
ENSNBRG00000016799	-	95	78.860	ENSHBUG00000021307	-	97	78.676	Haplochromis_burtoni
ENSNBRG00000016799	-	95	83.088	ENSHBUG00000012995	-	97	83.272	Haplochromis_burtoni
ENSNBRG00000016799	-	93	71.482	ENSKMAG00000016903	-	70	71.295	Kryptolebias_marmoratus
ENSNBRG00000016799	-	93	62.030	ENSKMAG00000016981	-	83	62.030	Kryptolebias_marmoratus
ENSNBRG00000016799	-	89	45.597	ENSLACG00000008367	-	97	45.597	Latimeria_chalumnae
ENSNBRG00000016799	-	95	68.852	ENSMAMG00000015216	-	97	68.670	Mastacembelus_armatus
ENSNBRG00000016799	-	95	69.945	ENSMAMG00000015247	-	97	69.763	Mastacembelus_armatus
ENSNBRG00000016799	-	95	67.577	ENSMAMG00000015097	-	97	67.395	Mastacembelus_armatus
ENSNBRG00000016799	-	93	78.008	ENSMZEG00005020281	-	88	77.820	Maylandia_zebra
ENSNBRG00000016799	-	95	83.333	ENSMZEG00005020274	-	96	83.519	Maylandia_zebra
ENSNBRG00000016799	-	86	84.898	ENSONIG00000012363	-	99	84.694	Oreochromis_niloticus
ENSNBRG00000016799	-	90	58.480	ENSPKIG00000011996	-	89	58.480	Paramormyrops_kingsleyae
ENSNBRG00000016799	-	94	58.801	ENSPKIG00000009271	-	88	59.176	Paramormyrops_kingsleyae
ENSNBRG00000016799	-	75	59.712	ENSPMGG00000000605	-	80	59.712	Periophthalmus_magnuspinnatus
ENSNBRG00000016799	-	93	70.301	ENSPFOG00000010758	-	82	70.301	Poecilia_formosa
ENSNBRG00000016799	-	93	69.907	ENSPLAG00000010093	-	69	69.907	Poecilia_latipinna
ENSNBRG00000016799	-	88	60.119	ENSPLAG00000005002	-	96	59.722	Poecilia_latipinna
ENSNBRG00000016799	-	94	60.112	ENSPLAG00000000406	-	97	59.738	Poecilia_latipinna
ENSNBRG00000016799	-	93	60.338	ENSPMEG00000014712	-	80	59.962	Poecilia_mexicana
ENSNBRG00000016799	-	91	69.714	ENSPREG00000021204	-	95	69.714	Poecilia_reticulata
ENSNBRG00000016799	-	93	70.301	ENSSMAG00000004663	-	85	70.113	Scophthalmus_maximus
ENSNBRG00000016799	-	90	75.634	ENSSDUG00000004257	-	92	75.439	Seriola_dumerili
ENSNBRG00000016799	-	92	73.905	ENSSLDG00000021625	-	92	73.714	Seriola_lalandi_dorsalis
ENSNBRG00000016799	-	94	70.599	ENSSPAG00000003320	-	90	70.599	Stegastes_partitus
ENSNBRG00000016799	-	89	61.176	ENSXMAG00000023457	-	96	60.784	Xiphophorus_maculatus
ENSNBRG00000016799	-	93	59.774	ENSXMAG00000022709	-	80	59.398	Xiphophorus_maculatus