EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000016822 (Gene tree)
Gene ID: 102793248
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: DNA-directed RNA polymerase I subunit RPA49-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5703 bases
Position: chrJH422284.1:5587148-5592850
Accession: 102793248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000021920	RNA_pol_I_A49	PF06870.12	1.7e-115	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022505	-	3091	XM_006787275	ENSNBRP00000021920	420 (aa)	XP_006787338	UPI0003EC1EFF

Gene Model

Click here to download ENSNBRG00000016822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000016822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000016822	polr1e	98	45.060	ENSG00000137054	POLR1E	99	45.000	Homo_sapiens
ENSNBRG00000016822	polr1e	99	73.077	ENSAPOG00000012452	polr1e	100	73.077	Acanthochromis_polyacanthus
ENSNBRG00000016822	polr1e	99	40.381	ENSAMEG00000010193	POLR1E	97	40.381	Ailuropoda_melanoleuca
ENSNBRG00000016822	polr1e	94	83.969	ENSACIG00000009884	polr1e	99	83.969	Amphilophus_citrinellus
ENSNBRG00000016822	polr1e	99	80.288	ENSAOCG00000005665	polr1e	100	80.288	Amphiprion_ocellaris
ENSNBRG00000016822	polr1e	99	80.769	ENSAPEG00000020581	polr1e	100	80.769	Amphiprion_percula
ENSNBRG00000016822	polr1e	99	78.365	ENSATEG00000020609	polr1e	100	78.365	Anabas_testudineus
ENSNBRG00000016822	polr1e	80	40.519	ENSAPLG00000010340	POLR1E	100	40.519	Anas_platyrhynchos
ENSNBRG00000016822	polr1e	98	45.411	ENSANAG00000038046	POLR1E	99	44.893	Aotus_nancymaae
ENSNBRG00000016822	polr1e	100	99.048	ENSACLG00000013685	polr1e	100	99.048	Astatotilapia_calliptera
ENSNBRG00000016822	polr1e	99	57.108	ENSAMXG00000018181	polr1e	99	57.108	Astyanax_mexicanus
ENSNBRG00000016822	polr1e	99	44.893	ENSBTAG00000012243	POLR1E	99	44.893	Bos_taurus
ENSNBRG00000016822	polr1e	90	46.174	ENSCJAG00000010512	POLR1E	94	46.174	Callithrix_jacchus
ENSNBRG00000016822	polr1e	99	43.529	ENSCAFG00000002377	POLR1E	99	43.529	Canis_familiaris
ENSNBRG00000016822	polr1e	98	43.780	ENSCAFG00020017851	POLR1E	99	43.294	Canis_lupus_dingo
ENSNBRG00000016822	polr1e	99	44.893	ENSCHIG00000019479	POLR1E	99	44.893	Capra_hircus
ENSNBRG00000016822	polr1e	98	45.694	ENSTSYG00000002075	POLR1E	98	45.694	Carlito_syrichta
ENSNBRG00000016822	polr1e	69	43.434	ENSCAPG00000015653	POLR1E	99	43.434	Cavia_aperea
ENSNBRG00000016822	polr1e	99	45.327	ENSCPOG00000009965	POLR1E	100	45.327	Cavia_porcellus
ENSNBRG00000016822	polr1e	97	41.505	ENSCCAG00000029460	POLR1E	99	41.050	Cebus_capucinus
ENSNBRG00000016822	polr1e	97	45.763	ENSCATG00000031732	POLR1E	99	45.238	Cercocebus_atys
ENSNBRG00000016822	polr1e	87	46.995	ENSCLAG00000012701	POLR1E	96	46.995	Chinchilla_lanigera
ENSNBRG00000016822	polr1e	97	45.763	ENSCSAG00000010782	POLR1E	99	45.238	Chlorocebus_sabaeus
ENSNBRG00000016822	polr1e	94	37.940	ENSCHOG00000013024	POLR1E	83	37.940	Choloepus_hoffmanni
ENSNBRG00000016822	polr1e	99	46.394	ENSCPBG00000006923	POLR1E	99	46.394	Chrysemys_picta_bellii
ENSNBRG00000016822	polr1e	98	45.783	ENSCANG00000036112	POLR1E	99	45.714	Colobus_angolensis_palliatus
ENSNBRG00000016822	polr1e	98	43.614	ENSCGRG00001006197	Polr1e	95	43.614	Cricetulus_griseus_chok1gshd
ENSNBRG00000016822	polr1e	98	43.373	ENSCGRG00000006430	Polr1e	95	43.373	Cricetulus_griseus_crigri
ENSNBRG00000016822	polr1e	99	68.916	ENSCSEG00000005121	polr1e	99	68.916	Cynoglossus_semilaevis
ENSNBRG00000016822	polr1e	99	76.923	ENSCVAG00000019759	polr1e	100	76.923	Cyprinodon_variegatus
ENSNBRG00000016822	polr1e	96	58.272	ENSDARG00000006434	polr1e	100	58.273	Danio_rerio
ENSNBRG00000016822	polr1e	99	40.632	ENSDNOG00000010257	POLR1E	99	40.632	Dasypus_novemcinctus
ENSNBRG00000016822	polr1e	84	42.340	ENSETEG00000018204	POLR1E	99	42.618	Echinops_telfairi
ENSNBRG00000016822	polr1e	99	43.943	ENSEASG00005000675	POLR1E	99	43.943	Equus_asinus_asinus
ENSNBRG00000016822	polr1e	99	43.943	ENSECAG00000014669	POLR1E	99	43.943	Equus_caballus
ENSNBRG00000016822	polr1e	99	39.183	ENSEEUG00000011928	POLR1E	86	39.183	Erinaceus_europaeus
ENSNBRG00000016822	polr1e	99	66.587	ENSELUG00000008150	polr1e	99	66.587	Esox_lucius
ENSNBRG00000016822	polr1e	99	44.181	ENSFCAG00000013081	POLR1E	99	44.181	Felis_catus
ENSNBRG00000016822	polr1e	94	45.750	ENSFALG00000012950	POLR1E	99	45.750	Ficedula_albicollis
ENSNBRG00000016822	polr1e	99	46.512	ENSFDAG00000016917	POLR1E	100	46.512	Fukomys_damarensis
ENSNBRG00000016822	polr1e	99	75.540	ENSFHEG00000009801	polr1e	100	75.540	Fundulus_heteroclitus
ENSNBRG00000016822	polr1e	98	54.762	ENSGMOG00000003336	POLR1E	99	54.762	Gadus_morhua
ENSNBRG00000016822	polr1e	99	45.714	ENSGALG00000005395	POLR1E	99	45.714	Gallus_gallus
ENSNBRG00000016822	polr1e	99	73.077	ENSGAFG00000004850	polr1e	100	73.077	Gambusia_affinis
ENSNBRG00000016822	polr1e	99	70.406	ENSGACG00000016087	polr1e	100	70.406	Gasterosteus_aculeatus
ENSNBRG00000016822	polr1e	96	42.787	ENSGAGG00000001659	POLR1E	99	42.180	Gopherus_agassizii
ENSNBRG00000016822	polr1e	99	45.238	ENSGGOG00000001882	POLR1E	99	45.865	Gorilla_gorilla
ENSNBRG00000016822	polr1e	100	99.286	ENSHBUG00000002559	polr1e	100	99.286	Haplochromis_burtoni
ENSNBRG00000016822	polr1e	99	45.433	ENSHGLG00000002036	POLR1E	100	45.433	Heterocephalus_glaber_female
ENSNBRG00000016822	polr1e	99	45.794	ENSHGLG00100012784	POLR1E	100	45.667	Heterocephalus_glaber_male
ENSNBRG00000016822	polr1e	99	71.154	ENSHCOG00000002774	polr1e	100	71.154	Hippocampus_comes
ENSNBRG00000016822	polr1e	99	56.010	ENSIPUG00000003019	polr1e	99	56.010	Ictalurus_punctatus
ENSNBRG00000016822	polr1e	99	44.019	ENSSTOG00000009810	POLR1E	99	44.019	Ictidomys_tridecemlineatus
ENSNBRG00000016822	polr1e	97	45.012	ENSJJAG00000020731	Polr1e	94	45.012	Jaculus_jaculus
ENSNBRG00000016822	polr1e	99	77.163	ENSKMAG00000000046	polr1e	100	77.163	Kryptolebias_marmoratus
ENSNBRG00000016822	polr1e	99	76.850	ENSLBEG00000003104	polr1e	99	76.850	Labrus_bergylta
ENSNBRG00000016822	polr1e	85	51.099	ENSLACG00000003416	POLR1E	99	51.099	Latimeria_chalumnae
ENSNBRG00000016822	polr1e	99	55.024	ENSLOCG00000012859	polr1e	99	55.024	Lepisosteus_oculatus
ENSNBRG00000016822	polr1e	99	44.836	ENSLAFG00000012831	POLR1E	99	44.836	Loxodonta_africana
ENSNBRG00000016822	polr1e	97	45.763	ENSMFAG00000045465	POLR1E	99	44.361	Macaca_fascicularis
ENSNBRG00000016822	polr1e	97	45.763	ENSMMUG00000017892	POLR1E	99	45.238	Macaca_mulatta
ENSNBRG00000016822	polr1e	99	41.860	ENSMNEG00000040283	POLR1E	99	41.860	Macaca_nemestrina
ENSNBRG00000016822	polr1e	97	45.763	ENSMLEG00000031135	POLR1E	99	45.238	Mandrillus_leucophaeus
ENSNBRG00000016822	polr1e	99	76.372	ENSMAMG00000001260	polr1e	99	76.372	Mastacembelus_armatus
ENSNBRG00000016822	polr1e	100	99.048	ENSMZEG00005021536	polr1e	100	99.048	Maylandia_zebra
ENSNBRG00000016822	polr1e	98	44.203	ENSMAUG00000021044	Polr1e	95	44.203	Mesocricetus_auratus
ENSNBRG00000016822	polr1e	98	45.694	ENSMICG00000003673	POLR1E	99	45.176	Microcebus_murinus
ENSNBRG00000016822	polr1e	98	43.447	ENSMOCG00000012920	Polr1e	94	43.447	Microtus_ochrogaster
ENSNBRG00000016822	polr1e	99	75.300	ENSMMOG00000007391	polr1e	100	75.300	Mola_mola
ENSNBRG00000016822	polr1e	90	47.354	ENSMODG00000002884	POLR1E	92	47.354	Monodelphis_domestica
ENSNBRG00000016822	polr1e	100	76.905	ENSMALG00000002665	polr1e	100	76.905	Monopterus_albus
ENSNBRG00000016822	polr1e	98	42.271	MGP_CAROLIEiJ_G0025967	Polr1e	98	42.211	Mus_caroli
ENSNBRG00000016822	polr1e	98	43.541	ENSMUSG00000028318	Polr1e	97	43.532	Mus_musculus
ENSNBRG00000016822	polr1e	98	44.337	MGP_PahariEiJ_G0024114	Polr1e	98	44.361	Mus_pahari
ENSNBRG00000016822	polr1e	98	44.019	MGP_SPRETEiJ_G0026930	Polr1e	98	44.030	Mus_spretus
ENSNBRG00000016822	polr1e	99	39.579	ENSMPUG00000006040	POLR1E	99	37.684	Mustela_putorius_furo
ENSNBRG00000016822	polr1e	99	45.131	ENSMLUG00000012688	POLR1E	96	45.131	Myotis_lucifugus
ENSNBRG00000016822	polr1e	97	45.499	ENSNGAG00000002520	Polr1e	94	45.499	Nannospalax_galili
ENSNBRG00000016822	polr1e	98	44.819	ENSNLEG00000003616	POLR1E	99	45.113	Nomascus_leucogenys
ENSNBRG00000016822	polr1e	73	50.222	ENSMEUG00000015372	-	80	50.222	Notamacropus_eugenii
ENSNBRG00000016822	polr1e	85	39.286	ENSOPRG00000014206	POLR1E	99	39.286	Ochotona_princeps
ENSNBRG00000016822	polr1e	97	46.569	ENSODEG00000014565	POLR1E	94	46.569	Octodon_degus
ENSNBRG00000016822	polr1e	100	99.048	ENSONIG00000008921	polr1e	100	99.048	Oreochromis_niloticus
ENSNBRG00000016822	polr1e	98	44.019	ENSOCUG00000024773	POLR1E	98	44.258	Oryctolagus_cuniculus
ENSNBRG00000016822	polr1e	99	73.798	ENSORLG00000005143	polr1e	100	73.798	Oryzias_latipes
ENSNBRG00000016822	polr1e	92	72.021	ENSORLG00020007271	polr1e	99	72.021	Oryzias_latipes_hni
ENSNBRG00000016822	polr1e	99	73.798	ENSORLG00015000137	polr1e	100	73.798	Oryzias_latipes_hsok
ENSNBRG00000016822	polr1e	99	71.122	ENSOMEG00000013264	polr1e	99	71.122	Oryzias_melastigma
ENSNBRG00000016822	polr1e	99	43.943	ENSOGAG00000012981	POLR1E	97	43.943	Otolemur_garnettii
ENSNBRG00000016822	polr1e	99	45.131	ENSOARG00000011465	POLR1E	96	45.131	Ovis_aries
ENSNBRG00000016822	polr1e	98	45.060	ENSPPAG00000034566	POLR1E	99	45.113	Pan_paniscus
ENSNBRG00000016822	polr1e	99	45.000	ENSPPRG00000005649	POLR1E	99	45.000	Panthera_pardus
ENSNBRG00000016822	polr1e	99	45.000	ENSPTIG00000009774	POLR1E	99	45.000	Panthera_tigris_altaica
ENSNBRG00000016822	polr1e	98	45.060	ENSPTRG00000020944	POLR1E	99	45.113	Pan_troglodytes
ENSNBRG00000016822	polr1e	97	45.763	ENSPANG00000025563	POLR1E	99	45.238	Papio_anubis
ENSNBRG00000016822	polr1e	99	57.957	ENSPKIG00000003562	polr1e	99	57.957	Paramormyrops_kingsleyae
ENSNBRG00000016822	polr1e	97	44.010	ENSPSIG00000003274	POLR1E	95	44.743	Pelodiscus_sinensis
ENSNBRG00000016822	polr1e	94	66.917	ENSPMGG00000024169	polr1e	96	66.917	Periophthalmus_magnuspinnatus
ENSNBRG00000016822	polr1e	98	37.864	ENSPEMG00000022300	-	94	37.864	Peromyscus_maniculatus_bairdii
ENSNBRG00000016822	polr1e	98	44.686	ENSPEMG00000019151	-	95	44.686	Peromyscus_maniculatus_bairdii
ENSNBRG00000016822	polr1e	95	47.407	ENSPCIG00000014798	POLR1E	98	47.407	Phascolarctos_cinereus
ENSNBRG00000016822	polr1e	99	70.045	ENSPFOG00000019627	polr1e	99	70.045	Poecilia_formosa
ENSNBRG00000016822	polr1e	99	74.279	ENSPLAG00000022679	polr1e	100	74.279	Poecilia_latipinna
ENSNBRG00000016822	polr1e	86	75.556	ENSPMEG00000022123	polr1e	93	75.556	Poecilia_mexicana
ENSNBRG00000016822	polr1e	99	73.317	ENSPREG00000009470	polr1e	100	73.317	Poecilia_reticulata
ENSNBRG00000016822	polr1e	97	45.521	ENSPPYG00000019061	POLR1E	98	45.521	Pongo_abelii
ENSNBRG00000016822	polr1e	52	39.462	ENSPCAG00000004891	POLR1E	72	39.462	Procavia_capensis
ENSNBRG00000016822	polr1e	99	45.476	ENSPCOG00000027448	POLR1E	99	45.476	Propithecus_coquereli
ENSNBRG00000016822	polr1e	95	43.890	ENSPVAG00000007940	POLR1E	84	43.890	Pteropus_vampyrus
ENSNBRG00000016822	polr1e	100	99.048	ENSPNYG00000001032	polr1e	100	99.048	Pundamilia_nyererei
ENSNBRG00000016822	polr1e	99	57.452	ENSPNAG00000006987	polr1e	99	57.452	Pygocentrus_nattereri
ENSNBRG00000016822	polr1e	98	43.478	ENSRNOG00000012664	Polr1e	95	43.478	Rattus_norvegicus
ENSNBRG00000016822	polr1e	98	45.301	ENSRBIG00000034214	POLR1E	99	46.842	Rhinopithecus_bieti
ENSNBRG00000016822	polr1e	97	45.763	ENSRROG00000031986	POLR1E	99	45.238	Rhinopithecus_roxellana
ENSNBRG00000016822	polr1e	96	45.122	ENSSBOG00000021415	POLR1E	97	45.122	Saimiri_boliviensis_boliviensis
ENSNBRG00000016822	polr1e	82	47.701	ENSSHAG00000016084	POLR1E	95	47.701	Sarcophilus_harrisii
ENSNBRG00000016822	polr1e	99	60.432	ENSSFOG00015002293	polr1e	99	60.432	Scleropages_formosus
ENSNBRG00000016822	polr1e	99	77.327	ENSSMAG00000011672	polr1e	94	77.327	Scophthalmus_maximus
ENSNBRG00000016822	polr1e	100	78.810	ENSSDUG00000022279	polr1e	100	78.810	Seriola_dumerili
ENSNBRG00000016822	polr1e	100	78.095	ENSSLDG00000024918	polr1e	100	78.095	Seriola_lalandi_dorsalis
ENSNBRG00000016822	polr1e	55	41.379	ENSSARG00000009810	-	58	41.379	Sorex_araneus
ENSNBRG00000016822	polr1e	99	43.914	ENSSPUG00000009499	POLR1E	100	43.914	Sphenodon_punctatus
ENSNBRG00000016822	polr1e	99	80.529	ENSSPAG00000021240	polr1e	100	80.529	Stegastes_partitus
ENSNBRG00000016822	polr1e	98	43.541	ENSSSCG00000005347	POLR1E	99	43.059	Sus_scrofa
ENSNBRG00000016822	polr1e	94	39.013	ENSTGUG00000007169	POLR1E	100	39.013	Taeniopygia_guttata
ENSNBRG00000016822	polr1e	99	71.053	ENSTRUG00000020779	polr1e	99	71.053	Takifugu_rubripes
ENSNBRG00000016822	polr1e	99	71.635	ENSTNIG00000017812	polr1e	99	71.635	Tetraodon_nigroviridis
ENSNBRG00000016822	polr1e	94	45.340	ENSTBEG00000013786	POLR1E	84	45.137	Tupaia_belangeri
ENSNBRG00000016822	polr1e	98	43.541	ENSTTRG00000008294	POLR1E	87	43.541	Tursiops_truncatus
ENSNBRG00000016822	polr1e	99	44.917	ENSUAMG00000012474	POLR1E	100	47.297	Ursus_americanus
ENSNBRG00000016822	polr1e	99	44.917	ENSUMAG00000011496	POLR1E	99	44.917	Ursus_maritimus
ENSNBRG00000016822	polr1e	81	41.399	ENSVPAG00000009048	POLR1E	81	41.399	Vicugna_pacos
ENSNBRG00000016822	polr1e	97	43.855	ENSVVUG00000019954	POLR1E	97	43.855	Vulpes_vulpes
ENSNBRG00000016822	polr1e	99	42.654	ENSXETG00000006533	polr1e	99	42.654	Xenopus_tropicalis
ENSNBRG00000016822	polr1e	99	70.433	ENSXCOG00000013706	polr1e	100	70.433	Xiphophorus_couchianus
ENSNBRG00000016822	polr1e	99	75.240	ENSXMAG00000012484	polr1e	100	75.240	Xiphophorus_maculatus