EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017078 (Gene tree)
Gene ID: 102790981
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: polyadenylate-binding protein 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1836 bases
Position: chrJH422273.1:20046089-20047924
Accession: 102790981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022275	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000022860	PABPN1L-201	714	XM_006780298	ENSNBRP00000022275	237 (aa)	XP_006780361	-

Gene Model

Click here to download ENSNBRG00000017078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017078	PABPN1L	74	57.527	ENSNBRG00000023955	pabpn1	90	58.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017078	PABPN1L	73	51.613	ENSG00000205022	PABPN1L	54	57.333	Homo_sapiens
ENSNBRG00000017078	PABPN1L	100	92.469	ENSAPOG00000000685	PABPN1L	78	92.469	Acanthochromis_polyacanthus
ENSNBRG00000017078	PABPN1L	100	94.093	ENSACIG00000021400	PABPN1L	97	94.093	Amphilophus_citrinellus
ENSNBRG00000017078	PABPN1L	100	94.118	ENSAOCG00000019844	PABPN1L	90	92.857	Amphiprion_ocellaris
ENSNBRG00000017078	PABPN1L	100	93.697	ENSAPEG00000019534	PABPN1L	90	92.437	Amphiprion_percula
ENSNBRG00000017078	PABPN1L	100	92.405	ENSATEG00000011646	PABPN1L	95	92.405	Anabas_testudineus
ENSNBRG00000017078	PABPN1L	52	56.693	ENSAPLG00000009174	PABPN1L	81	64.583	Anas_platyrhynchos
ENSNBRG00000017078	PABPN1L	72	56.647	ENSACAG00000013250	PABPN1L	75	61.702	Anolis_carolinensis
ENSNBRG00000017078	PABPN1L	74	53.371	ENSANAG00000038178	PABPN1L	55	56.863	Aotus_nancymaae
ENSNBRG00000017078	PABPN1L	100	99.578	ENSACLG00000025147	PABPN1L	90	99.578	Astatotilapia_calliptera
ENSNBRG00000017078	PABPN1L	60	72.727	ENSAMXG00000010873	PABPN1L	54	74.648	Astyanax_mexicanus
ENSNBRG00000017078	PABPN1L	72	56.284	ENSCJAG00000045284	PABPN1L	55	60.927	Callithrix_jacchus
ENSNBRG00000017078	PABPN1L	64	56.291	ENSCAPG00000007240	PABPN1L	55	55.484	Cavia_aperea
ENSNBRG00000017078	PABPN1L	50	62.712	ENSCPOG00000025951	PABPN1L	56	54.545	Cavia_porcellus
ENSNBRG00000017078	PABPN1L	77	54.787	ENSCCAG00000027631	PABPN1L	54	59.236	Cebus_capucinus
ENSNBRG00000017078	PABPN1L	73	52.406	ENSCATG00000031060	PABPN1L	54	59.333	Cercocebus_atys
ENSNBRG00000017078	PABPN1L	64	56.522	ENSCSAG00000002881	PABPN1L	51	59.333	Chlorocebus_sabaeus
ENSNBRG00000017078	PABPN1L	62	56.410	ENSCANG00000039336	PABPN1L	56	56.410	Colobus_angolensis_palliatus
ENSNBRG00000017078	PABPN1L	73	50.794	ENSCGRG00001013211	Pabpn1l	54	55.705	Cricetulus_griseus_chok1gshd
ENSNBRG00000017078	PABPN1L	73	50.794	ENSCGRG00000015868	Pabpn1l	54	55.705	Cricetulus_griseus_crigri
ENSNBRG00000017078	PABPN1L	100	86.076	ENSCSEG00000001142	pabpn1l	90	86.076	Cynoglossus_semilaevis
ENSNBRG00000017078	PABPN1L	100	89.076	ENSCVAG00000015547	PABPN1L	90	89.916	Cyprinodon_variegatus
ENSNBRG00000017078	PABPN1L	73	52.601	ENSDNOG00000034677	PABPN1L	50	60.000	Dasypus_novemcinctus
ENSNBRG00000017078	PABPN1L	74	49.451	ENSEASG00005000777	PABPN1L	51	58.333	Equus_asinus_asinus
ENSNBRG00000017078	PABPN1L	74	51.099	ENSECAG00000000378	PABPN1L	51	58.333	Equus_caballus
ENSNBRG00000017078	PABPN1L	54	58.140	ENSEEUG00000004747	PABPN1L	53	58.140	Erinaceus_europaeus
ENSNBRG00000017078	PABPN1L	99	66.667	ENSELUG00000018385	PABPN1L	90	67.511	Esox_lucius
ENSNBRG00000017078	PABPN1L	63	53.846	ENSFCAG00000010465	PABPN1L	53	56.667	Felis_catus
ENSNBRG00000017078	PABPN1L	65	60.645	ENSFALG00000003319	PABPN1L	53	63.780	Ficedula_albicollis
ENSNBRG00000017078	PABPN1L	100	90.295	ENSFHEG00000018295	PABPN1L	90	90.295	Fundulus_heteroclitus
ENSNBRG00000017078	PABPN1L	100	78.423	ENSGMOG00000001475	PABPN1L	91	81.328	Gadus_morhua
ENSNBRG00000017078	PABPN1L	61	61.111	ENSGALG00000006242	PABPN1L	73	61.538	Gallus_gallus
ENSNBRG00000017078	PABPN1L	100	89.496	ENSGAFG00000012565	PABPN1L	90	90.336	Gambusia_affinis
ENSNBRG00000017078	PABPN1L	100	86.364	ENSGACG00000015428	PABPN1L	91	86.364	Gasterosteus_aculeatus
ENSNBRG00000017078	PABPN1L	73	52.660	ENSGGOG00000012670	PABPN1L	54	57.616	Gorilla_gorilla
ENSNBRG00000017078	PABPN1L	100	100.000	ENSHBUG00000002388	PABPN1L	90	100.000	Haplochromis_burtoni
ENSNBRG00000017078	PABPN1L	100	86.420	ENSHCOG00000004151	PABPN1L	90	85.597	Hippocampus_comes
ENSNBRG00000017078	PABPN1L	57	73.333	ENSIPUG00000023583	PABPN1L	69	75.556	Ictalurus_punctatus
ENSNBRG00000017078	PABPN1L	74	48.864	ENSJJAG00000006433	Pabpn1l	63	48.864	Jaculus_jaculus
ENSNBRG00000017078	PABPN1L	91	89.302	ENSKMAG00000001112	PABPN1L	94	90.141	Kryptolebias_marmoratus
ENSNBRG00000017078	PABPN1L	100	85.833	ENSLBEG00000011647	PABPN1L	88	89.583	Labrus_bergylta
ENSNBRG00000017078	PABPN1L	55	58.993	ENSLAFG00000025902	-	56	58.993	Loxodonta_africana
ENSNBRG00000017078	PABPN1L	73	52.406	ENSMFAG00000002924	PABPN1L	54	59.333	Macaca_fascicularis
ENSNBRG00000017078	PABPN1L	73	52.973	ENSMMUG00000012438	PABPN1L	54	59.333	Macaca_mulatta
ENSNBRG00000017078	PABPN1L	73	52.406	ENSMNEG00000044808	PABPN1L	54	59.333	Macaca_nemestrina
ENSNBRG00000017078	PABPN1L	73	51.613	ENSMLEG00000032667	PABPN1L	54	58.000	Mandrillus_leucophaeus
ENSNBRG00000017078	PABPN1L	100	99.578	ENSMZEG00005002186	PABPN1L	90	99.578	Maylandia_zebra
ENSNBRG00000017078	PABPN1L	75	48.087	ENSMAUG00000014032	Pabpn1l	55	53.020	Mesocricetus_auratus
ENSNBRG00000017078	PABPN1L	64	55.000	ENSMICG00000028179	PABPN1L	54	56.000	Microcebus_murinus
ENSNBRG00000017078	PABPN1L	73	45.902	ENSMOCG00000007955	Pabpn1l	57	50.980	Microtus_ochrogaster
ENSNBRG00000017078	PABPN1L	84	91.960	ENSMMOG00000017714	PABPN1L	86	91.960	Mola_mola
ENSNBRG00000017078	PABPN1L	100	89.873	ENSMALG00000016926	PABPN1L	90	89.873	Monopterus_albus
ENSNBRG00000017078	PABPN1L	69	46.875	MGP_CAROLIEiJ_G0031670	Pabpn1l	57	49.359	Mus_caroli
ENSNBRG00000017078	PABPN1L	78	47.716	ENSMUSG00000069867	Pabpn1l	58	50.311	Mus_musculus
ENSNBRG00000017078	PABPN1L	69	48.438	MGP_PahariEiJ_G0023268	Pabpn1l	57	51.282	Mus_pahari
ENSNBRG00000017078	PABPN1L	78	47.208	MGP_SPRETEiJ_G0032788	Pabpn1l	58	50.311	Mus_spretus
ENSNBRG00000017078	PABPN1L	74	48.370	ENSNGAG00000023992	Pabpn1l	53	54.110	Nannospalax_galili
ENSNBRG00000017078	PABPN1L	72	52.356	ENSOPRG00000005597	PABPN1L	54	58.000	Ochotona_princeps
ENSNBRG00000017078	PABPN1L	71	56.213	ENSOANG00000013901	PABPN1L	56	59.589	Ornithorhynchus_anatinus
ENSNBRG00000017078	PABPN1L	100	86.076	ENSORLG00000026560	PABPN1L	90	86.076	Oryzias_latipes
ENSNBRG00000017078	PABPN1L	100	86.076	ENSORLG00020015068	PABPN1L	90	86.076	Oryzias_latipes_hni
ENSNBRG00000017078	PABPN1L	100	86.076	ENSORLG00015000397	PABPN1L	90	86.076	Oryzias_latipes_hsok
ENSNBRG00000017078	PABPN1L	100	83.193	ENSOMEG00000017896	PABPN1L	65	81.933	Oryzias_melastigma
ENSNBRG00000017078	PABPN1L	63	52.258	ENSPPRG00000015106	PABPN1L	53	56.000	Panthera_pardus
ENSNBRG00000017078	PABPN1L	73	52.381	ENSPANG00000026039	PABPN1L	54	58.667	Papio_anubis
ENSNBRG00000017078	PABPN1L	67	65.432	ENSPSIG00000003404	PABPN1L	82	61.728	Pelodiscus_sinensis
ENSNBRG00000017078	PABPN1L	90	87.324	ENSPMGG00000013927	PABPN1L	94	87.324	Periophthalmus_magnuspinnatus
ENSNBRG00000017078	PABPN1L	73	49.485	ENSPEMG00000016624	Pabpn1l	55	55.128	Peromyscus_maniculatus_bairdii
ENSNBRG00000017078	PABPN1L	56	61.940	ENSPCIG00000007038	-	91	61.940	Phascolarctos_cinereus
ENSNBRG00000017078	PABPN1L	100	89.496	ENSPFOG00000007001	PABPN1L	90	90.336	Poecilia_formosa
ENSNBRG00000017078	PABPN1L	100	89.496	ENSPLAG00000018431	PABPN1L	90	90.336	Poecilia_latipinna
ENSNBRG00000017078	PABPN1L	73	86.517	ENSPMEG00000000169	-	91	84.239	Poecilia_mexicana
ENSNBRG00000017078	PABPN1L	100	89.496	ENSPMEG00000009108	PABPN1L	90	90.336	Poecilia_mexicana
ENSNBRG00000017078	PABPN1L	91	91.667	ENSPREG00000022533	PABPN1L	92	91.549	Poecilia_reticulata
ENSNBRG00000017078	PABPN1L	74	53.591	ENSPPYG00000007655	PABPN1L	55	56.209	Pongo_abelii
ENSNBRG00000017078	PABPN1L	59	56.667	ENSPCOG00000024077	PABPN1L	54	56.667	Propithecus_coquereli
ENSNBRG00000017078	PABPN1L	72	50.270	ENSPVAG00000002716	PABPN1L	53	59.732	Pteropus_vampyrus
ENSNBRG00000017078	PABPN1L	100	99.578	ENSPNYG00000004803	PABPN1L	90	99.578	Pundamilia_nyererei
ENSNBRG00000017078	PABPN1L	58	58.621	ENSRNOG00000029558	Pabpn1l	54	58.621	Rattus_norvegicus
ENSNBRG00000017078	PABPN1L	73	51.852	ENSRBIG00000030740	PABPN1L	54	57.333	Rhinopithecus_bieti
ENSNBRG00000017078	PABPN1L	73	51.852	ENSRROG00000032240	-	54	57.333	Rhinopithecus_roxellana
ENSNBRG00000017078	PABPN1L	73	52.660	ENSRROG00000035483	-	54	58.667	Rhinopithecus_roxellana
ENSNBRG00000017078	PABPN1L	73	52.941	ENSSBOG00000018410	PABPN1L	56	57.792	Saimiri_boliviensis_boliviensis
ENSNBRG00000017078	PABPN1L	100	85.950	ENSSMAG00000021348	PABPN1L	90	88.017	Scophthalmus_maximus
ENSNBRG00000017078	PABPN1L	100	93.277	ENSSDUG00000006986	PABPN1L	90	92.017	Seriola_dumerili
ENSNBRG00000017078	PABPN1L	100	93.277	ENSSLDG00000021845	PABPN1L	90	92.017	Seriola_lalandi_dorsalis
ENSNBRG00000017078	PABPN1L	65	47.436	ENSSARG00000005178	-	50	57.759	Sorex_araneus
ENSNBRG00000017078	PABPN1L	100	93.697	ENSSPAG00000017978	PABPN1L	90	92.437	Stegastes_partitus
ENSNBRG00000017078	PABPN1L	54	60.769	ENSSSCG00000036367	PABPN1L	54	55.333	Sus_scrofa
ENSNBRG00000017078	PABPN1L	100	79.747	ENSTRUG00000024725	PABPN1L	89	79.747	Takifugu_rubripes
ENSNBRG00000017078	PABPN1L	81	91.667	ENSTNIG00000009416	PABPN1L	100	91.667	Tetraodon_nigroviridis
ENSNBRG00000017078	PABPN1L	51	62.500	ENSTTRG00000004691	PABPN1L	52	56.552	Tursiops_truncatus
ENSNBRG00000017078	PABPN1L	60	54.839	ENSXETG00000011258	pabpn1l	64	57.554	Xenopus_tropicalis
ENSNBRG00000017078	PABPN1L	87	91.787	ENSXCOG00000003254	PABPN1L	92	91.080	Xiphophorus_couchianus
ENSNBRG00000017078	PABPN1L	90	87.793	ENSXMAG00000029090	PABPN1L	94	87.793	Xiphophorus_maculatus