EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017202 (Gene tree)
Gene ID: 102800210
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: tRNA-splicing ligase RtcB homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3928 bases
Position: chrJH422274.1:17986947-17990874
Accession: 102800210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022431	RtcB	PF01139.17	8.3e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023026	-	2167	XM_006781049	ENSNBRP00000022431	505 (aa)	XP_006781112	UPI0003EC0D2B

Gene Model

Click here to download ENSNBRG00000017202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017202	rtcb	100	93.465	ENSG00000100220	RTCB	100	93.465	Homo_sapiens
ENSNBRG00000017202	rtcb	100	96.832	ENSAPOG00000006040	rtcb	100	96.832	Acanthochromis_polyacanthus
ENSNBRG00000017202	rtcb	100	93.465	ENSAMEG00000016152	RTCB	100	93.465	Ailuropoda_melanoleuca
ENSNBRG00000017202	rtcb	100	91.683	ENSACIG00000009083	rtcb	100	91.683	Amphilophus_citrinellus
ENSNBRG00000017202	rtcb	100	96.832	ENSAOCG00000005662	rtcb	100	97.391	Amphiprion_ocellaris
ENSNBRG00000017202	rtcb	100	96.832	ENSAPEG00000024701	rtcb	100	96.832	Amphiprion_percula
ENSNBRG00000017202	rtcb	96	91.786	ENSAPEG00000024653	rtcb	100	91.786	Amphiprion_percula
ENSNBRG00000017202	rtcb	100	96.040	ENSATEG00000000618	rtcb	100	96.040	Anabas_testudineus
ENSNBRG00000017202	rtcb	100	90.366	ENSACAG00000014817	RTCB	100	90.366	Anolis_carolinensis
ENSNBRG00000017202	rtcb	100	79.604	ENSANAG00000018191	-	91	79.604	Aotus_nancymaae
ENSNBRG00000017202	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSNBRG00000017202	rtcb	100	99.604	ENSACLG00000008367	rtcb	100	99.783	Astatotilapia_calliptera
ENSNBRG00000017202	rtcb	100	95.050	ENSAMXG00000042320	rtcb	100	95.050	Astyanax_mexicanus
ENSNBRG00000017202	rtcb	100	93.663	ENSBTAG00000011070	RTCB	100	93.663	Bos_taurus
ENSNBRG00000017202	rtcb	100	75.446	WBGene00008877	rtcb-1	100	75.446	Caenorhabditis_elegans
ENSNBRG00000017202	rtcb	100	93.267	ENSCJAG00000006128	RTCB	100	93.267	Callithrix_jacchus
ENSNBRG00000017202	rtcb	100	93.465	ENSCAFG00000001785	RTCB	100	93.465	Canis_familiaris
ENSNBRG00000017202	rtcb	100	89.307	ENSCAFG00000010789	-	100	89.307	Canis_familiaris
ENSNBRG00000017202	rtcb	100	93.465	ENSCAFG00020004890	-	100	93.465	Canis_lupus_dingo
ENSNBRG00000017202	rtcb	87	89.318	ENSCAFG00020018953	-	99	89.318	Canis_lupus_dingo
ENSNBRG00000017202	rtcb	100	93.663	ENSCHIG00000027009	-	100	93.663	Capra_hircus
ENSNBRG00000017202	rtcb	100	93.465	ENSTSYG00000012320	RTCB	100	93.465	Carlito_syrichta
ENSNBRG00000017202	rtcb	94	93.501	ENSCAPG00000011647	RTCB	96	93.501	Cavia_aperea
ENSNBRG00000017202	rtcb	100	93.267	ENSCCAG00000000618	RTCB	100	93.267	Cebus_capucinus
ENSNBRG00000017202	rtcb	100	93.267	ENSCATG00000033424	RTCB	100	93.267	Cercocebus_atys
ENSNBRG00000017202	rtcb	100	93.069	ENSCLAG00000007997	RTCB	100	93.069	Chinchilla_lanigera
ENSNBRG00000017202	rtcb	100	93.069	ENSCSAG00000008351	RTCB	100	93.069	Chlorocebus_sabaeus
ENSNBRG00000017202	rtcb	100	79.604	ENSCHOG00000009123	RTCB	100	79.604	Choloepus_hoffmanni
ENSNBRG00000017202	rtcb	100	93.069	ENSCPBG00000023184	RTCB	100	93.069	Chrysemys_picta_bellii
ENSNBRG00000017202	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSNBRG00000017202	rtcb	100	82.970	ENSCSAVG00000008124	-	99	82.970	Ciona_savignyi
ENSNBRG00000017202	rtcb	100	89.703	ENSCANG00000001891	RTCB	100	89.703	Colobus_angolensis_palliatus
ENSNBRG00000017202	rtcb	100	93.465	ENSCGRG00001011173	Rtcb	100	93.465	Cricetulus_griseus_chok1gshd
ENSNBRG00000017202	rtcb	93	93.843	ENSCGRG00000009587	-	96	93.843	Cricetulus_griseus_crigri
ENSNBRG00000017202	rtcb	100	94.653	ENSCSEG00000003986	rtcb	100	94.653	Cynoglossus_semilaevis
ENSNBRG00000017202	rtcb	82	94.712	ENSCVAG00000000569	rtcb	95	94.712	Cyprinodon_variegatus
ENSNBRG00000017202	rtcb	100	95.248	ENSDARG00000101047	rtcb	100	95.248	Danio_rerio
ENSNBRG00000017202	rtcb	80	89.189	ENSDNOG00000012425	RTCB	99	89.189	Dasypus_novemcinctus
ENSNBRG00000017202	rtcb	100	93.465	ENSDORG00000010855	Rtcb	100	93.465	Dipodomys_ordii
ENSNBRG00000017202	rtcb	99	84.891	FBgn0032781	RtcB	99	84.891	Drosophila_melanogaster
ENSNBRG00000017202	rtcb	100	87.723	ENSETEG00000001988	RTCB	100	87.723	Echinops_telfairi
ENSNBRG00000017202	rtcb	100	85.941	ENSEBUG00000014235	rtcb	100	85.941	Eptatretus_burgeri
ENSNBRG00000017202	rtcb	100	93.663	ENSEASG00005019059	RTCB	100	93.663	Equus_asinus_asinus
ENSNBRG00000017202	rtcb	100	93.663	ENSECAG00000023998	RTCB	100	93.663	Equus_caballus
ENSNBRG00000017202	rtcb	89	85.011	ENSEEUG00000006251	RTCB	100	85.011	Erinaceus_europaeus
ENSNBRG00000017202	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSNBRG00000017202	rtcb	100	93.465	ENSFCAG00000026480	RTCB	100	93.465	Felis_catus
ENSNBRG00000017202	rtcb	100	93.663	ENSFALG00000013334	RTCB	100	93.663	Ficedula_albicollis
ENSNBRG00000017202	rtcb	100	93.267	ENSFDAG00000018150	RTCB	100	93.267	Fukomys_damarensis
ENSNBRG00000017202	rtcb	100	96.040	ENSFHEG00000009595	rtcb	100	96.040	Fundulus_heteroclitus
ENSNBRG00000017202	rtcb	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSNBRG00000017202	rtcb	100	93.069	ENSGALG00000012611	RTCB	100	93.069	Gallus_gallus
ENSNBRG00000017202	rtcb	100	96.238	ENSGAFG00000004198	rtcb	100	96.238	Gambusia_affinis
ENSNBRG00000017202	rtcb	100	94.257	ENSGACG00000000586	rtcb	100	94.257	Gasterosteus_aculeatus
ENSNBRG00000017202	rtcb	93	92.553	ENSGAGG00000019133	RTCB	98	92.553	Gopherus_agassizii
ENSNBRG00000017202	rtcb	100	93.465	ENSGGOG00000011402	RTCB	100	93.465	Gorilla_gorilla
ENSNBRG00000017202	rtcb	100	99.604	ENSHBUG00000020571	rtcb	100	99.604	Haplochromis_burtoni
ENSNBRG00000017202	rtcb	93	67.373	ENSHGLG00000001066	-	99	67.373	Heterocephalus_glaber_female
ENSNBRG00000017202	rtcb	100	93.267	ENSHGLG00000004492	RTCB	100	93.267	Heterocephalus_glaber_female
ENSNBRG00000017202	rtcb	100	93.267	ENSHGLG00100008965	RTCB	100	93.267	Heterocephalus_glaber_male
ENSNBRG00000017202	rtcb	100	92.702	ENSHCOG00000006450	rtcb	100	92.702	Hippocampus_comes
ENSNBRG00000017202	rtcb	100	95.446	ENSIPUG00000015443	rtcb	100	95.446	Ictalurus_punctatus
ENSNBRG00000017202	rtcb	100	93.069	ENSSTOG00000003878	RTCB	100	93.069	Ictidomys_tridecemlineatus
ENSNBRG00000017202	rtcb	100	93.663	ENSJJAG00000010667	Rtcb	100	93.663	Jaculus_jaculus
ENSNBRG00000017202	rtcb	100	95.050	ENSKMAG00000013178	rtcb	100	95.050	Kryptolebias_marmoratus
ENSNBRG00000017202	rtcb	100	95.050	ENSLBEG00000010566	RTCB	100	95.050	Labrus_bergylta
ENSNBRG00000017202	rtcb	100	93.861	ENSLBEG00000000214	rtcb	100	93.861	Labrus_bergylta
ENSNBRG00000017202	rtcb	100	93.069	ENSLACG00000013033	RTCB	100	93.069	Latimeria_chalumnae
ENSNBRG00000017202	rtcb	100	94.257	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSNBRG00000017202	rtcb	100	92.871	ENSLAFG00000002082	RTCB	100	92.871	Loxodonta_africana
ENSNBRG00000017202	rtcb	100	93.069	ENSMFAG00000034419	RTCB	100	93.069	Macaca_fascicularis
ENSNBRG00000017202	rtcb	100	93.069	ENSMMUG00000006720	RTCB	100	93.069	Macaca_mulatta
ENSNBRG00000017202	rtcb	100	93.069	ENSMNEG00000040669	RTCB	100	93.069	Macaca_nemestrina
ENSNBRG00000017202	rtcb	100	93.267	ENSMLEG00000040505	RTCB	100	93.267	Mandrillus_leucophaeus
ENSNBRG00000017202	rtcb	100	95.842	ENSMAMG00000020676	rtcb	100	95.842	Mastacembelus_armatus
ENSNBRG00000017202	rtcb	100	99.604	ENSMZEG00005018942	rtcb	100	99.604	Maylandia_zebra
ENSNBRG00000017202	rtcb	100	92.702	ENSMGAG00000012805	RTCB	100	92.702	Meleagris_gallopavo
ENSNBRG00000017202	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSNBRG00000017202	rtcb	100	74.653	ENSMICG00000036677	-	100	74.653	Microcebus_murinus
ENSNBRG00000017202	rtcb	100	93.267	ENSMICG00000013303	-	100	93.267	Microcebus_murinus
ENSNBRG00000017202	rtcb	100	93.861	ENSMOCG00000002440	Rtcb	100	93.861	Microtus_ochrogaster
ENSNBRG00000017202	rtcb	100	96.436	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSNBRG00000017202	rtcb	100	93.465	ENSMODG00000001414	RTCB	100	93.465	Monodelphis_domestica
ENSNBRG00000017202	rtcb	100	95.050	ENSMALG00000007603	rtcb	100	95.050	Monopterus_albus
ENSNBRG00000017202	rtcb	100	93.465	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.465	Mus_caroli
ENSNBRG00000017202	rtcb	100	93.465	ENSMUSG00000001783	Rtcb	100	93.465	Mus_musculus
ENSNBRG00000017202	rtcb	100	93.465	MGP_PahariEiJ_G0031396	Rtcb	100	93.465	Mus_pahari
ENSNBRG00000017202	rtcb	100	93.465	MGP_SPRETEiJ_G0016507	Rtcb	100	93.465	Mus_spretus
ENSNBRG00000017202	rtcb	100	93.465	ENSMPUG00000012285	RTCB	100	93.465	Mustela_putorius_furo
ENSNBRG00000017202	rtcb	100	90.533	ENSMLUG00000007803	RTCB	100	90.533	Myotis_lucifugus
ENSNBRG00000017202	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSNBRG00000017202	rtcb	100	93.465	ENSNLEG00000004960	RTCB	100	93.465	Nomascus_leucogenys
ENSNBRG00000017202	rtcb	88	99.107	ENSMEUG00000007809	-	88	99.107	Notamacropus_eugenii
ENSNBRG00000017202	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSNBRG00000017202	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSNBRG00000017202	rtcb	100	62.376	ENSODEG00000005042	-	100	62.376	Octodon_degus
ENSNBRG00000017202	rtcb	100	98.416	ENSONIG00000007474	rtcb	100	98.416	Oreochromis_niloticus
ENSNBRG00000017202	rtcb	100	93.069	ENSOANG00000005524	RTCB	100	93.069	Ornithorhynchus_anatinus
ENSNBRG00000017202	rtcb	93	92.979	ENSOCUG00000008270	RTCB	96	92.979	Oryctolagus_cuniculus
ENSNBRG00000017202	rtcb	100	96.040	ENSORLG00000020093	rtcb	100	96.040	Oryzias_latipes
ENSNBRG00000017202	rtcb	100	95.644	ENSORLG00020003706	rtcb	100	95.644	Oryzias_latipes_hni
ENSNBRG00000017202	rtcb	100	95.842	ENSORLG00015002968	rtcb	100	95.842	Oryzias_latipes_hsok
ENSNBRG00000017202	rtcb	100	95.446	ENSOMEG00000021278	rtcb	100	95.446	Oryzias_melastigma
ENSNBRG00000017202	rtcb	100	92.673	ENSOGAG00000001425	RTCB	100	92.673	Otolemur_garnettii
ENSNBRG00000017202	rtcb	100	93.663	ENSOARG00000018008	RTCB	100	93.663	Ovis_aries
ENSNBRG00000017202	rtcb	100	93.465	ENSPPAG00000028667	RTCB	100	93.465	Pan_paniscus
ENSNBRG00000017202	rtcb	100	93.465	ENSPPRG00000004038	RTCB	100	93.465	Panthera_pardus
ENSNBRG00000017202	rtcb	94	89.474	ENSPTIG00000020499	RTCB	97	90.526	Panthera_tigris_altaica
ENSNBRG00000017202	rtcb	100	93.465	ENSPTRG00000014287	RTCB	100	93.465	Pan_troglodytes
ENSNBRG00000017202	rtcb	100	93.069	ENSPANG00000016035	RTCB	100	93.069	Papio_anubis
ENSNBRG00000017202	rtcb	100	94.851	ENSPKIG00000001881	rtcb	100	94.851	Paramormyrops_kingsleyae
ENSNBRG00000017202	rtcb	91	93.696	ENSPSIG00000011690	RTCB	100	93.696	Pelodiscus_sinensis
ENSNBRG00000017202	rtcb	100	95.248	ENSPMGG00000016672	rtcb	100	95.248	Periophthalmus_magnuspinnatus
ENSNBRG00000017202	rtcb	100	93.465	ENSPEMG00000019548	Rtcb	100	93.465	Peromyscus_maniculatus_bairdii
ENSNBRG00000017202	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSNBRG00000017202	rtcb	100	93.465	ENSPCIG00000009467	RTCB	100	93.465	Phascolarctos_cinereus
ENSNBRG00000017202	rtcb	100	96.634	ENSPFOG00000003058	rtcb	100	96.634	Poecilia_formosa
ENSNBRG00000017202	rtcb	100	96.436	ENSPLAG00000017663	rtcb	100	96.436	Poecilia_latipinna
ENSNBRG00000017202	rtcb	100	96.634	ENSPMEG00000006227	rtcb	100	96.634	Poecilia_mexicana
ENSNBRG00000017202	rtcb	100	96.238	ENSPREG00000018467	rtcb	100	96.238	Poecilia_reticulata
ENSNBRG00000017202	rtcb	100	93.465	ENSPPYG00000011752	RTCB	100	93.465	Pongo_abelii
ENSNBRG00000017202	rtcb	93	76.907	ENSPCAG00000013641	RTCB	100	76.907	Procavia_capensis
ENSNBRG00000017202	rtcb	100	93.267	ENSPCOG00000017243	RTCB	100	93.267	Propithecus_coquereli
ENSNBRG00000017202	rtcb	93	92.553	ENSPVAG00000002380	RTCB	100	92.553	Pteropus_vampyrus
ENSNBRG00000017202	rtcb	100	99.604	ENSPNYG00000022760	rtcb	100	99.604	Pundamilia_nyererei
ENSNBRG00000017202	rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSNBRG00000017202	rtcb	100	93.465	ENSRNOG00000004813	Rtcb	100	93.465	Rattus_norvegicus
ENSNBRG00000017202	rtcb	100	85.178	ENSRBIG00000042090	RTCB	100	85.178	Rhinopithecus_bieti
ENSNBRG00000017202	rtcb	100	88.911	ENSSBOG00000020085	-	100	88.911	Saimiri_boliviensis_boliviensis
ENSNBRG00000017202	rtcb	94	94.093	ENSSHAG00000016277	RTCB	100	94.093	Sarcophilus_harrisii
ENSNBRG00000017202	rtcb	100	95.050	ENSSFOG00015000763	rtcb	100	95.050	Scleropages_formosus
ENSNBRG00000017202	rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSNBRG00000017202	rtcb	100	92.079	ENSSMAG00000005096	rtcb	100	92.079	Scophthalmus_maximus
ENSNBRG00000017202	rtcb	100	94.455	ENSSDUG00000012605	rtcb	100	94.455	Seriola_dumerili
ENSNBRG00000017202	rtcb	100	94.257	ENSSLDG00000019458	rtcb	100	94.257	Seriola_lalandi_dorsalis
ENSNBRG00000017202	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSNBRG00000017202	rtcb	100	92.475	ENSSPUG00000012814	RTCB	100	92.475	Sphenodon_punctatus
ENSNBRG00000017202	rtcb	100	96.832	ENSSPAG00000004623	rtcb	100	96.832	Stegastes_partitus
ENSNBRG00000017202	rtcb	100	93.465	ENSSSCG00000000158	RTCB	100	93.465	Sus_scrofa
ENSNBRG00000017202	rtcb	100	93.663	ENSTGUG00000010947	RTCB	99	93.663	Taeniopygia_guttata
ENSNBRG00000017202	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSNBRG00000017202	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSNBRG00000017202	rtcb	100	80.396	ENSTBEG00000004418	RTCB	100	80.396	Tupaia_belangeri
ENSNBRG00000017202	rtcb	93	92.340	ENSTTRG00000006417	RTCB	100	92.340	Tursiops_truncatus
ENSNBRG00000017202	rtcb	100	93.465	ENSUAMG00000022792	RTCB	100	93.465	Ursus_americanus
ENSNBRG00000017202	rtcb	100	93.465	ENSUMAG00000017225	RTCB	100	93.465	Ursus_maritimus
ENSNBRG00000017202	rtcb	100	93.267	ENSVPAG00000005375	RTCB	100	93.267	Vicugna_pacos
ENSNBRG00000017202	rtcb	100	93.465	ENSVVUG00000023408	RTCB	100	94.103	Vulpes_vulpes
ENSNBRG00000017202	rtcb	100	92.673	ENSXETG00000011523	rtcb	100	92.673	Xenopus_tropicalis
ENSNBRG00000017202	rtcb	100	96.238	ENSXMAG00000002855	rtcb	100	96.238	Xiphophorus_maculatus