EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000017223 (Gene tree)
Gene ID
102788970
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
10325 bases
Position
chrJH422449.1:842503-852827
Accession
102788970
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000022461RRM_1PF00076.229.8e-4512
ENSNBRP00000022461RRM_1PF00076.229.8e-4522
ENSNBRP00000022456RRM_1PF00076.221.3e-4412
ENSNBRP00000022456RRM_1PF00076.221.3e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000023056-3775XM_006806999ENSNBRP00000022461521 (aa)XP_006807062UPI0003EC3AFE
ENSNBRT00000023051-1659XM_006807001ENSNBRP00000022456552 (aa)XP_006807064-
Gene Model
Click here to download ENSNBRG00000017223's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017223's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000017223-8380.580ENSNBRG00000013047puf60b9782.775
ENSNBRG00000017223-5634.314ENSNBRG00000002568u2af2a7136.275
ENSNBRG00000017223-5835.294ENSNBRG00000011100-7135.294
ENSNBRG00000017223-5431.818ENSNBRG00000000322-6531.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000017223-9981.939ENSG00000179950PUF6010082.726Homo_sapiens
ENSNBRG00000017223-10082.922ENSAPOG00000001713puf60b10082.922Acanthochromis_polyacanthus
ENSNBRG00000017223-9980.228ENSAMEG00000006406PUF609380.534Ailuropoda_melanoleuca
ENSNBRG00000017223-9883.658ENSACIG00000021705puf60b10083.658Amphilophus_citrinellus
ENSNBRG00000017223-9891.373ENSACIG00000003263-10091.569Amphilophus_citrinellus
ENSNBRG00000017223-10091.555ENSAOCG00000015558-10091.555Amphiprion_ocellaris
ENSNBRG00000017223-10082.922ENSAOCG00000005395puf60b10083.658Amphiprion_ocellaris
ENSNBRG00000017223-9978.846ENSAPEG00000011923puf60b9978.846Amphiprion_percula
ENSNBRG00000017223-9878.794ENSAPEG00000001836-10079.119Amphiprion_percula
ENSNBRG00000017223-10082.732ENSATEG00000001730puf60b10082.732Anabas_testudineus
ENSNBRG00000017223-10092.706ENSATEG00000006303-10092.706Anabas_testudineus
ENSNBRG00000017223-9981.939ENSAPLG00000010150PUF6010082.129Anas_platyrhynchos
ENSNBRG00000017223-9881.679ENSACAG00000001645PUF609681.836Anolis_carolinensis
ENSNBRG00000017223-9982.129ENSANAG00000018626PUF6010082.917Aotus_nancymaae
ENSNBRG00000017223-9883.658ENSACLG00000004462puf60b10083.658Astatotilapia_calliptera
ENSNBRG00000017223-9883.681ENSAMXG00000036570puf60a10081.331Astyanax_mexicanus
ENSNBRG00000017223-9876.326ENSAMXG00000041030puf60b10077.883Astyanax_mexicanus
ENSNBRG00000017223-9981.939ENSBTAG00000037493PUF609982.252Bos_taurus
ENSNBRG00000017223-7849.827WBGene00004389rnp-68349.835Caenorhabditis_elegans
ENSNBRG00000017223-9981.939ENSCJAG00000021485PUF609981.391Callithrix_jacchus
ENSNBRG00000017223-9981.749ENSCAFG00000001400PUF609382.061Canis_familiaris
ENSNBRG00000017223-9982.129ENSCAFG00020018754PUF609981.579Canis_lupus_dingo
ENSNBRG00000017223-9981.559ENSCHIG00000001618PUF608781.973Capra_hircus
ENSNBRG00000017223-9982.129ENSTSYG00000011912PUF6010082.917Carlito_syrichta
ENSNBRG00000017223-9977.170ENSCPOG00000014613PUF609875.360Cavia_porcellus
ENSNBRG00000017223-9981.559ENSCCAG00000007744PUF609981.391Cebus_capucinus
ENSNBRG00000017223-9981.939ENSCATG00000035405PUF609981.391Cercocebus_atys
ENSNBRG00000017223-9982.129ENSCLAG00000009154PUF609382.163Chinchilla_lanigera
ENSNBRG00000017223-9882.692ENSCSAG00000008878PUF6010082.726Chlorocebus_sabaeus
ENSNBRG00000017223-9882.692ENSCPBG00000005595PUF609981.474Chrysemys_picta_bellii
ENSNBRG00000017223-9647.945ENSCING00000008436-9548.824Ciona_intestinalis
ENSNBRG00000017223-6257.817ENSCING00000002156-8758.112Ciona_intestinalis
ENSNBRG00000017223-9548.491ENSCSAVG00000004765-9747.600Ciona_savignyi
ENSNBRG00000017223-8266.667ENSCSAVG00000001385-9954.070Ciona_savignyi
ENSNBRG00000017223-7982.185ENSCANG00000041843PUF6010082.227Colobus_angolensis_palliatus
ENSNBRG00000017223-9982.319ENSCGRG00001017442Puf609382.353Cricetulus_griseus_chok1gshd
ENSNBRG00000017223-9982.319ENSCGRG00000003717Puf609382.353Cricetulus_griseus_crigri
ENSNBRG00000017223-9983.109ENSCSEG00000019887puf60b9383.109Cynoglossus_semilaevis
ENSNBRG00000017223-9980.539ENSCSEG00000014845-9181.310Cynoglossus_semilaevis
ENSNBRG00000017223-8889.805ENSCVAG00000001560-9789.805Cyprinodon_variegatus
ENSNBRG00000017223-9882.685ENSCVAG00000009386puf60b10083.074Cyprinodon_variegatus
ENSNBRG00000017223-9883.301ENSDARG00000032175puf60a10090.254Danio_rerio
ENSNBRG00000017223-9875.940ENSDARG00000001241puf60b10088.976Danio_rerio
ENSNBRG00000017223-9668.297ENSDNOG00000043278PUF609068.945Dasypus_novemcinctus
ENSNBRG00000017223-9982.129ENSDORG00000004585Puf609582.163Dipodomys_ordii
ENSNBRG00000017223-8364.360FBgn0028577hfp8058.485Drosophila_melanogaster
ENSNBRG00000017223-9861.158ENSEBUG00000014291puf60b8463.667Eptatretus_burgeri
ENSNBRG00000017223-9569.000ENSEBUG00000005470-9764.909Eptatretus_burgeri
ENSNBRG00000017223-9982.129ENSEASG00005009695PUF609981.579Equus_asinus_asinus
ENSNBRG00000017223-9982.129ENSECAG00000024681PUF609881.579Equus_caballus
ENSNBRG00000017223-10086.011ENSELUG00000018443-10086.604Esox_lucius
ENSNBRG00000017223-10079.516ENSELUG00000006507puf60b10078.349Esox_lucius
ENSNBRG00000017223-9982.129ENSFCAG00000001045PUF6010082.917Felis_catus
ENSNBRG00000017223-9972.433ENSFALG00000001136PUF609872.814Ficedula_albicollis
ENSNBRG00000017223-9982.319ENSFDAG00000017177PUF609382.353Fukomys_damarensis
ENSNBRG00000017223-10082.353ENSFHEG00000020046puf60b10083.463Fundulus_heteroclitus
ENSNBRG00000017223-9489.139ENSFHEG00000021687PUF6010089.727Fundulus_heteroclitus
ENSNBRG00000017223-9968.381ENSGMOG00000006392puf60b10069.143Gadus_morhua
ENSNBRG00000017223-6586.628ENSGALG00000039901PUF609486.628Gallus_gallus
ENSNBRG00000017223-10082.353ENSGAFG00000021040puf60b10083.463Gambusia_affinis
ENSNBRG00000017223-9886.106ENSGAFG00000004334-10085.714Gambusia_affinis
ENSNBRG00000017223-10076.560ENSGACG00000001484-10077.756Gasterosteus_aculeatus
ENSNBRG00000017223-9971.238ENSGACG00000004717puf60b9971.238Gasterosteus_aculeatus
ENSNBRG00000017223-9882.692ENSGAGG00000013289PUF609281.474Gopherus_agassizii
ENSNBRG00000017223-9981.939ENSGGOG00000004646PUF609981.579Gorilla_gorilla
ENSNBRG00000017223-10099.042ENSHBUG00000009634-10099.042Haplochromis_burtoni
ENSNBRG00000017223-10082.922ENSHBUG00000015118puf60b10083.658Haplochromis_burtoni
ENSNBRG00000017223-9982.319ENSHGLG00000006111PUF609382.353Heterocephalus_glaber_female
ENSNBRG00000017223-9982.319ENSHGLG00100012362PUF609382.353Heterocephalus_glaber_male
ENSNBRG00000017223-9880.000ENSHCOG00000015541puf60b10080.561Hippocampus_comes
ENSNBRG00000017223-9673.307ENSHCOG00000000378-9970.778Hippocampus_comes
ENSNBRG00000017223-9882.726ENSIPUG00000002453puf60a10082.726Ictalurus_punctatus
ENSNBRG00000017223-9877.736ENSIPUG00000004660puf60b10078.220Ictalurus_punctatus
ENSNBRG00000017223-9982.129ENSSTOG00000025037PUF609482.163Ictidomys_tridecemlineatus
ENSNBRG00000017223-9982.319ENSJJAG00000001076Puf609978.269Jaculus_jaculus
ENSNBRG00000017223-9883.268ENSKMAG00000016745puf60b10083.658Kryptolebias_marmoratus
ENSNBRG00000017223-9885.057ENSKMAG00000010106-10085.249Kryptolebias_marmoratus
ENSNBRG00000017223-9980.769ENSLBEG00000012505puf60b10080.769Labrus_bergylta
ENSNBRG00000017223-6878.904ENSLACG00000005456PUF609978.904Latimeria_chalumnae
ENSNBRG00000017223-10085.985ENSLOCG00000010106puf60b10085.985Lepisosteus_oculatus
ENSNBRG00000017223-9980.989ENSLAFG00000022929PUF609481.025Loxodonta_africana
ENSNBRG00000017223-9981.973ENSMFAG00000043373PUF609982.008Macaca_fascicularis
ENSNBRG00000017223-9981.939ENSMMUG00000013558PUF609981.579Macaca_mulatta
ENSNBRG00000017223-9981.939ENSMNEG00000031099PUF609981.391Macaca_nemestrina
ENSNBRG00000017223-9882.692ENSMLEG00000040009PUF6010082.726Mandrillus_leucophaeus
ENSNBRG00000017223-9982.534ENSMAMG00000010394puf60b10080.682Mastacembelus_armatus
ENSNBRG00000017223-10094.828ENSMAMG00000019476-10094.828Mastacembelus_armatus
ENSNBRG00000017223-9883.658ENSMZEG00005018515puf60b10083.658Maylandia_zebra
ENSNBRG00000017223-10099.234ENSMZEG00005019425-10099.234Maylandia_zebra
ENSNBRG00000017223-9981.664ENSMGAG00000013070PUF609586.957Meleagris_gallopavo
ENSNBRG00000017223-9366.402ENSMAUG00000018549-9566.535Mesocricetus_auratus
ENSNBRG00000017223-6884.973ENSMAUG00000014267-9084.973Mesocricetus_auratus
ENSNBRG00000017223-9982.129ENSMICG00000012226PUF609982.443Microcebus_murinus
ENSNBRG00000017223-9982.319ENSMOCG00000018780Puf609382.634Microtus_ochrogaster
ENSNBRG00000017223-9883.463ENSMMOG00000004217puf60b10083.463Mola_mola
ENSNBRG00000017223-9978.641ENSMMOG00000018059-9983.063Mola_mola
ENSNBRG00000017223-9981.559ENSMODG00000009161PUF609779.167Monodelphis_domestica
ENSNBRG00000017223-10092.720ENSMALG00000000200-10092.146Monopterus_albus
ENSNBRG00000017223-9976.538ENSMALG00000006797puf60b10075.901Monopterus_albus
ENSNBRG00000017223-9982.510MGP_CAROLIEiJ_G0019910Puf609382.543Mus_caroli
ENSNBRG00000017223-9982.510ENSMUSG00000002524Puf609382.543Mus_musculus
ENSNBRG00000017223-9982.510MGP_PahariEiJ_G0019920Puf609382.543Mus_pahari
ENSNBRG00000017223-9982.510MGP_SPRETEiJ_G0020812Puf609382.543Mus_spretus
ENSNBRG00000017223-9981.939ENSMPUG00000008137PUF609282.252Mustela_putorius_furo
ENSNBRG00000017223-9981.559ENSMLUG00000000238-9381.870Myotis_lucifugus
ENSNBRG00000017223-9976.415ENSMLUG00000013032-9976.460Myotis_lucifugus
ENSNBRG00000017223-9982.319ENSNGAG00000000712Puf6010083.109Nannospalax_galili
ENSNBRG00000017223-9981.939ENSNLEG00000002156PUF609981.579Nomascus_leucogenys
ENSNBRG00000017223-7191.667ENSOPRG00000002147PUF607591.126Ochotona_princeps
ENSNBRG00000017223-9562.055ENSODEG00000015513-9860.618Octodon_degus
ENSNBRG00000017223-7190.625ENSODEG00000014024-9090.625Octodon_degus
ENSNBRG00000017223-10098.467ENSONIG00000014030-9998.467Oreochromis_niloticus
ENSNBRG00000017223-9983.462ENSONIG00000006247puf60b9883.462Oreochromis_niloticus
ENSNBRG00000017223-9767.984ENSOANG00000006962PUF609967.589Ornithorhynchus_anatinus
ENSNBRG00000017223-10082.922ENSORLG00000012279puf60b10083.658Oryzias_latipes
ENSNBRG00000017223-9888.350ENSORLG00000028655-9988.350Oryzias_latipes
ENSNBRG00000017223-10082.922ENSORLG00020007333puf6010083.658Oryzias_latipes_hni
ENSNBRG00000017223-9989.293ENSORLG00020018144-9989.293Oryzias_latipes_hni
ENSNBRG00000017223-9989.101ENSORLG00015016833-9989.101Oryzias_latipes_hsok
ENSNBRG00000017223-10082.420ENSORLG00015007718puf60b10083.333Oryzias_latipes_hsok
ENSNBRG00000017223-9989.655ENSOMEG00000022185-9989.655Oryzias_melastigma
ENSNBRG00000017223-10081.227ENSOMEG00000001643puf60b9982.377Oryzias_melastigma
ENSNBRG00000017223-9982.129ENSOGAG00000006259PUF609382.443Otolemur_garnettii
ENSNBRG00000017223-9980.497ENSOARG00000016235PUF609880.806Ovis_aries
ENSNBRG00000017223-9981.939ENSPPAG00000029933PUF609981.426Pan_paniscus
ENSNBRG00000017223-9982.129ENSPPRG00000003257PUF6010082.917Panthera_pardus
ENSNBRG00000017223-9979.699ENSPTIG00000009795PUF6010079.588Panthera_tigris_altaica
ENSNBRG00000017223-9981.939ENSPTRG00000020670PUF609981.426Pan_troglodytes
ENSNBRG00000017223-9981.939ENSPTRG00000043963-9981.579Pan_troglodytes
ENSNBRG00000017223-9981.939ENSPANG00000021936PUF609981.391Papio_anubis
ENSNBRG00000017223-10084.791ENSPKIG00000012204puf60b10085.380Paramormyrops_kingsleyae
ENSNBRG00000017223-10085.472ENSPKIG00000004295puf60a10090.476Paramormyrops_kingsleyae
ENSNBRG00000017223-9982.129ENSPSIG00000004679PUF609982.129Pelodiscus_sinensis
ENSNBRG00000017223-9882.150ENSPMGG00000013444puf60b10081.731Periophthalmus_magnuspinnatus
ENSNBRG00000017223-9982.319ENSPEMG00000008820Puf609382.353Peromyscus_maniculatus_bairdii
ENSNBRG00000017223-10081.238ENSPCIG00000020270PUF609982.443Phascolarctos_cinereus
ENSNBRG00000017223-10088.528ENSPFOG00000011118-10088.337Poecilia_formosa
ENSNBRG00000017223-10082.353ENSPFOG00000019217puf60b9980.769Poecilia_formosa
ENSNBRG00000017223-9883.074ENSPLAG00000010754puf60b10083.463Poecilia_latipinna
ENSNBRG00000017223-10088.337ENSPLAG00000017025-9288.145Poecilia_latipinna
ENSNBRG00000017223-10088.910ENSPMEG00000009767-9288.719Poecilia_mexicana
ENSNBRG00000017223-10082.353ENSPMEG00000000838puf60b10083.463Poecilia_mexicana
ENSNBRG00000017223-10079.667ENSPREG00000005440puf60b10080.037Poecilia_reticulata
ENSNBRG00000017223-7980.238ENSPPYG00000018951-9580.760Pongo_abelii
ENSNBRG00000017223-7981.710ENSPCAG00000014837PUF6010082.227Procavia_capensis
ENSNBRG00000017223-9981.939ENSPCOG00000027981PUF609982.252Propithecus_coquereli
ENSNBRG00000017223-9891.139ENSPVAG00000016167PUF608191.139Pteropus_vampyrus
ENSNBRG00000017223-10099.234ENSPNYG00000004273-10099.234Pundamilia_nyererei
ENSNBRG00000017223-9883.658ENSPNYG00000002556puf60b10083.658Pundamilia_nyererei
ENSNBRG00000017223-9882.171ENSPNAG00000019909puf60a9982.625Pygocentrus_nattereri
ENSNBRG00000017223-9976.145ENSPNAG00000019415puf60b9175.432Pygocentrus_nattereri
ENSNBRG00000017223-9982.510ENSRNOG00000009960Puf609382.543Rattus_norvegicus
ENSNBRG00000017223-9981.939ENSRBIG00000035274PUF609981.579Rhinopithecus_bieti
ENSNBRG00000017223-9981.939ENSRROG00000029360PUF609981.973Rhinopithecus_roxellana
ENSNBRG00000017223-9980.989ENSSBOG00000027089PUF609980.113Saimiri_boliviensis_boliviensis
ENSNBRG00000017223-8882.128ENSSHAG00000006668PUF609378.958Sarcophilus_harrisii
ENSNBRG00000017223-9879.238ENSSFOG00015019619puf60b9982.626Scleropages_formosus
ENSNBRG00000017223-10079.747ENSSFOG00015019371puf60a9885.743Scleropages_formosus
ENSNBRG00000017223-7489.273ENSSMAG00000016381puf60b7888.889Scophthalmus_maximus
ENSNBRG00000017223-9981.733ENSSDUG00000009935puf60b9982.377Seriola_dumerili
ENSNBRG00000017223-9795.257ENSSDUG00000007048-9795.059Seriola_dumerili
ENSNBRG00000017223-9891.797ENSSLDG00000007366-10091.602Seriola_lalandi_dorsalis
ENSNBRG00000017223-9982.197ENSSLDG00000024011puf60b10081.439Seriola_lalandi_dorsalis
ENSNBRG00000017223-6475.516ENSSPUG00000013518PUF609275.516Sphenodon_punctatus
ENSNBRG00000017223-10080.407ENSSPAG00000012144puf60b10081.629Stegastes_partitus
ENSNBRG00000017223-9893.725ENSSPAG00000020285-10093.725Stegastes_partitus
ENSNBRG00000017223-9882.308ENSSSCG00000038800PUF609979.135Sus_scrofa
ENSNBRG00000017223-9980.725ENSTGUG00000012797-10080.725Taeniopygia_guttata
ENSNBRG00000017223-9983.846ENSTRUG00000005420puf60b10081.818Takifugu_rubripes
ENSNBRG00000017223-9886.614ENSTRUG00000008843-10086.024Takifugu_rubripes
ENSNBRG00000017223-9985.798ENSTNIG00000003069-9985.798Tetraodon_nigroviridis
ENSNBRG00000017223-9983.846ENSTNIG00000013675puf60b9983.846Tetraodon_nigroviridis
ENSNBRG00000017223-5683.056ENSTBEG00000002751-9983.056Tupaia_belangeri
ENSNBRG00000017223-7567.143ENSTBEG00000001899-10067.714Tupaia_belangeri
ENSNBRG00000017223-9880.925ENSTTRG00000017088PUF6010082.342Tursiops_truncatus
ENSNBRG00000017223-9982.129ENSUAMG00000024917PUF609981.579Ursus_americanus
ENSNBRG00000017223-9977.757ENSUMAG00000000272PUF609374.307Ursus_maritimus
ENSNBRG00000017223-9982.129ENSVVUG00000022527PUF6010082.917Vulpes_vulpes
ENSNBRG00000017223-9881.154ENSXETG00000012469puf609781.154Xenopus_tropicalis
ENSNBRG00000017223-9880.545ENSXCOG00000012355puf60b10080.934Xiphophorus_couchianus
ENSNBRG00000017223-9984.556ENSXMAG00000010507-9984.272Xiphophorus_maculatus
ENSNBRG00000017223-10082.353ENSXMAG00000001862puf60b10083.463Xiphophorus_maculatus

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