EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017257 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5845 bases
Position: chrJH422295.1:1513028-1518872
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022507	Ribosomal_L7Ae	PF01248.26	4.2e-05	1	1
ENSNBRP00000022573	Ribosomal_L7Ae	PF01248.26	4.5e-05	1	1
ENSNBRP00000022585	Ribosomal_L7Ae	PF01248.26	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023181	-	459	-	ENSNBRP00000022585	152 (aa)	-	-
ENSNBRT00000023103	-	450	-	ENSNBRP00000022507	149 (aa)	-	-
ENSNBRT00000023169	-	450	-	ENSNBRP00000022573	149 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000017257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017257	-	79	34.454	ENSNBRG00000021837	-	74	35.345
ENSNBRG00000017257	-	74	37.273	ENSNBRG00000021929	-	69	37.273
ENSNBRG00000017257	-	89	44.776	ENSNBRG00000017336	-	85	44.776
ENSNBRG00000017257	-	82	32.540	ENSNBRG00000002246	gadd45aa	79	34.646
ENSNBRG00000017257	-	88	40.909	ENSNBRG00000021364	-	81	40.909
ENSNBRG00000017257	-	88	36.090	ENSNBRG00000014444	gadd45ga	81	36.090
ENSNBRG00000017257	-	81	36.364	ENSNBRG00000016121	gadd45ab	75	36.364
ENSNBRG00000017257	-	87	45.865	ENSNBRG00000017371	gadd45bb	83	45.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017257	-	77	94.737	ENSHBUG00000021349	-	100	94.737	Haplochromis_burtoni