EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017311 (Gene tree)
Gene ID: 102784114
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: signal recognition particle receptor subunit alpha-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9941 bases
Position: chrJH422401.1:1058424-1068364
Accession: 102784114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022602	SRP54	PF00448.22	8.1e-48	1	1
ENSNBRP00000022627	SRP54	PF00448.22	8.1e-42	1	1
ENSNBRP00000022602	SRP54_N	PF02881.19	1.4e-10	1	1
ENSNBRP00000022627	SRP54_N	PF02881.19	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023223	-	1905	-	ENSNBRP00000022627	634 (aa)	-	-
ENSNBRT00000023198	-	6619	XM_006804647	ENSNBRP00000022602	647 (aa)	XP_006804710	UPI0003EC233C

Gene Model

Click here to download ENSNBRG00000017311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017311	srpra	100	67.841	ENSG00000182934	SRPRA	100	67.737	Homo_sapiens
ENSNBRG00000017311	srpra	100	89.385	ENSAPOG00000017588	srpra	100	89.538	Acanthochromis_polyacanthus
ENSNBRG00000017311	srpra	100	67.835	ENSAMEG00000000117	SRPRA	100	67.123	Ailuropoda_melanoleuca
ENSNBRG00000017311	srpra	100	88.253	ENSACIG00000021588	srpra	100	89.645	Amphilophus_citrinellus
ENSNBRG00000017311	srpra	100	89.538	ENSAOCG00000018884	srpra	100	89.692	Amphiprion_ocellaris
ENSNBRG00000017311	srpra	100	89.538	ENSAPEG00000022286	srpra	92	89.692	Amphiprion_percula
ENSNBRG00000017311	srpra	100	85.100	ENSATEG00000023578	srpra	95	96.353	Anabas_testudineus
ENSNBRG00000017311	srpra	94	71.197	ENSAPLG00000016079	SRPRA	99	70.947	Anas_platyrhynchos
ENSNBRG00000017311	srpra	100	70.015	ENSACAG00000000108	SRPRA	100	69.848	Anolis_carolinensis
ENSNBRG00000017311	srpra	100	67.688	ENSANAG00000020346	SRPRA	100	67.226	Aotus_nancymaae
ENSNBRG00000017311	srpra	100	98.918	ENSACLG00000000518	srpra	100	98.918	Astatotilapia_calliptera
ENSNBRG00000017311	srpra	100	73.570	ENSAMXG00000009975	srpra	100	73.457	Astyanax_mexicanus
ENSNBRG00000017311	srpra	100	67.073	ENSBTAG00000014105	SRPRA	100	67.325	Bos_taurus
ENSNBRG00000017311	srpra	99	49.697	WBGene00009521	F38A1.8	99	48.939	Caenorhabditis_elegans
ENSNBRG00000017311	srpra	100	67.435	ENSCJAG00000008752	SRPRA	100	66.972	Callithrix_jacchus
ENSNBRG00000017311	srpra	100	66.311	ENSCAFG00000010474	SRPRA	100	65.601	Canis_familiaris
ENSNBRG00000017311	srpra	100	67.988	ENSCAFG00020010608	SRPRA	100	67.275	Canis_lupus_dingo
ENSNBRG00000017311	srpra	100	68.341	ENSCHIG00000012423	SRPRA	100	67.021	Capra_hircus
ENSNBRG00000017311	srpra	78	83.188	ENSTSYG00000005187	SRPRA	93	85.542	Carlito_syrichta
ENSNBRG00000017311	srpra	95	64.239	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSNBRG00000017311	srpra	100	67.890	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSNBRG00000017311	srpra	100	67.530	ENSCCAG00000025602	SRPRA	100	66.971	Cebus_capucinus
ENSNBRG00000017311	srpra	100	67.994	ENSCATG00000039354	SRPRA	100	67.530	Cercocebus_atys
ENSNBRG00000017311	srpra	100	68.196	ENSCLAG00000016839	SRPRA	100	67.477	Chinchilla_lanigera
ENSNBRG00000017311	srpra	100	67.841	ENSCSAG00000002271	SRPRA	100	67.378	Chlorocebus_sabaeus
ENSNBRG00000017311	srpra	54	87.245	ENSCHOG00000010015	-	73	87.245	Choloepus_hoffmanni
ENSNBRG00000017311	srpra	100	68.304	ENSCPBG00000011128	SRPRA	100	70.393	Chrysemys_picta_bellii
ENSNBRG00000017311	srpra	99	58.258	ENSCING00000008954	-	100	58.045	Ciona_intestinalis
ENSNBRG00000017311	srpra	99	59.665	ENSCSAVG00000005602	-	100	59.726	Ciona_savignyi
ENSNBRG00000017311	srpra	100	67.994	ENSCANG00000032337	SRPRA	100	67.530	Colobus_angolensis_palliatus
ENSNBRG00000017311	srpra	100	67.994	ENSCGRG00001017670	Srpr	100	66.412	Cricetulus_griseus_chok1gshd
ENSNBRG00000017311	srpra	100	67.994	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSNBRG00000017311	srpra	100	84.074	ENSCSEG00000002374	srpra	100	83.767	Cynoglossus_semilaevis
ENSNBRG00000017311	srpra	100	83.614	ENSCVAG00000019881	srpra	100	83.920	Cyprinodon_variegatus
ENSNBRG00000017311	srpra	100	79.027	ENSDARG00000061124	srpra	100	77.879	Danio_rerio
ENSNBRG00000017311	srpra	100	67.625	ENSDNOG00000010821	SRPRA	100	65.964	Dasypus_novemcinctus
ENSNBRG00000017311	srpra	100	68.502	ENSDORG00000016719	Srpr	100	67.933	Dipodomys_ordii
ENSNBRG00000017311	srpra	99	51.538	FBgn0010391	Gtp-bp	100	52.067	Drosophila_melanogaster
ENSNBRG00000017311	srpra	100	67.123	ENSETEG00000013956	SRPRA	100	65.913	Echinops_telfairi
ENSNBRG00000017311	srpra	50	84.112	ENSEBUG00000002602	srpra	92	69.267	Eptatretus_burgeri
ENSNBRG00000017311	srpra	100	67.683	ENSEASG00005022980	SRPRA	100	66.769	Equus_asinus_asinus
ENSNBRG00000017311	srpra	100	67.683	ENSECAG00000014692	SRPRA	100	66.769	Equus_caballus
ENSNBRG00000017311	srpra	100	63.247	ENSEEUG00000007920	SRPRA	100	62.012	Erinaceus_europaeus
ENSNBRG00000017311	srpra	100	83.257	ENSELUG00000017643	srpra	100	84.793	Esox_lucius
ENSNBRG00000017311	srpra	100	67.732	ENSFCAG00000011274	-	100	66.464	Felis_catus
ENSNBRG00000017311	srpra	81	62.075	ENSFCAG00000030894	-	99	60.377	Felis_catus
ENSNBRG00000017311	srpra	99	69.892	ENSFALG00000005048	SRPRA	99	68.845	Ficedula_albicollis
ENSNBRG00000017311	srpra	100	68.043	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSNBRG00000017311	srpra	100	86.175	ENSFHEG00000016959	srpra	100	86.636	Fundulus_heteroclitus
ENSNBRG00000017311	srpra	100	81.298	ENSGMOG00000013244	srpra	100	81.077	Gadus_morhua
ENSNBRG00000017311	srpra	100	70.633	ENSGALG00000030759	SRPRA	100	70.934	Gallus_gallus
ENSNBRG00000017311	srpra	100	86.244	ENSGAFG00000000453	srpra	100	86.244	Gambusia_affinis
ENSNBRG00000017311	srpra	100	83.051	ENSGACG00000006550	srpra	100	82.535	Gasterosteus_aculeatus
ENSNBRG00000017311	srpra	100	70.197	ENSGAGG00000021157	SRPRA	100	70.544	Gopherus_agassizii
ENSNBRG00000017311	srpra	100	67.841	ENSGGOG00000012962	SRPRA	100	67.737	Gorilla_gorilla
ENSNBRG00000017311	srpra	100	98.764	ENSHBUG00000000119	srpra	100	98.764	Haplochromis_burtoni
ENSNBRG00000017311	srpra	100	67.071	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSNBRG00000017311	srpra	100	67.071	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSNBRG00000017311	srpra	100	83.461	ENSHCOG00000010749	srpra	100	83.767	Hippocampus_comes
ENSNBRG00000017311	srpra	94	75.530	ENSIPUG00000000867	srpra	99	75.041	Ictalurus_punctatus
ENSNBRG00000017311	srpra	100	67.890	ENSSTOG00000009897	SRPRA	100	67.580	Ictidomys_tridecemlineatus
ENSNBRG00000017311	srpra	100	67.634	ENSJJAG00000020272	Srpr	100	67.530	Jaculus_jaculus
ENSNBRG00000017311	srpra	100	85.123	ENSKMAG00000002280	srpra	100	86.350	Kryptolebias_marmoratus
ENSNBRG00000017311	srpra	100	87.404	ENSLBEG00000009608	srpra	100	87.711	Labrus_bergylta
ENSNBRG00000017311	srpra	100	71.429	ENSLACG00000017781	SRPRA	100	72.273	Latimeria_chalumnae
ENSNBRG00000017311	srpra	100	75.112	ENSLOCG00000002733	srpra	100	76.408	Lepisosteus_oculatus
ENSNBRG00000017311	srpra	100	67.737	ENSLAFG00000010252	SRPRA	100	66.869	Loxodonta_africana
ENSNBRG00000017311	srpra	100	67.994	ENSMFAG00000032606	SRPRA	100	67.530	Macaca_fascicularis
ENSNBRG00000017311	srpra	100	67.994	ENSMMUG00000007938	SRPRA	100	67.530	Macaca_mulatta
ENSNBRG00000017311	srpra	100	68.349	ENSMNEG00000030709	SRPRA	100	67.884	Macaca_nemestrina
ENSNBRG00000017311	srpra	100	67.994	ENSMLEG00000043404	SRPRA	100	67.530	Mandrillus_leucophaeus
ENSNBRG00000017311	srpra	100	86.000	ENSMAMG00000000473	srpra	100	86.308	Mastacembelus_armatus
ENSNBRG00000017311	srpra	100	98.918	ENSMZEG00005013432	srpra	100	98.918	Maylandia_zebra
ENSNBRG00000017311	srpra	94	69.404	ENSMGAG00000000732	SRPRA	100	70.418	Meleagris_gallopavo
ENSNBRG00000017311	srpra	100	67.994	ENSMAUG00000015648	Srpr	100	66.667	Mesocricetus_auratus
ENSNBRG00000017311	srpra	100	67.841	ENSMICG00000015981	SRPRA	100	67.071	Microcebus_murinus
ENSNBRG00000017311	srpra	100	67.688	ENSMOCG00000008311	Srpr	100	66.361	Microtus_ochrogaster
ENSNBRG00000017311	srpra	100	78.615	ENSMMOG00000005019	srpra	100	76.048	Mola_mola
ENSNBRG00000017311	srpra	100	68.092	ENSMODG00000004576	-	100	67.023	Monodelphis_domestica
ENSNBRG00000017311	srpra	100	87.692	ENSMALG00000011343	srpra	100	87.692	Monopterus_albus
ENSNBRG00000017311	srpra	100	67.841	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSNBRG00000017311	srpra	100	67.688	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSNBRG00000017311	srpra	100	67.688	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSNBRG00000017311	srpra	100	64.818	MGP_SPRETEiJ_G0033075	Srpr	100	63.333	Mus_spretus
ENSNBRG00000017311	srpra	100	67.732	ENSMPUG00000006626	SRPRA	100	67.584	Mustela_putorius_furo
ENSNBRG00000017311	srpra	100	66.717	ENSMLUG00000017334	SRPRA	100	67.021	Myotis_lucifugus
ENSNBRG00000017311	srpra	100	67.381	ENSNGAG00000015686	Srpr	100	66.109	Nannospalax_galili
ENSNBRG00000017311	srpra	99	64.769	ENSNLEG00000007467	SRPRA	100	67.093	Nomascus_leucogenys
ENSNBRG00000017311	srpra	94	67.150	ENSMEUG00000004956	SRPRA	100	65.700	Notamacropus_eugenii
ENSNBRG00000017311	srpra	100	63.748	ENSOPRG00000013160	SRPRA	100	63.344	Ochotona_princeps
ENSNBRG00000017311	srpra	100	67.481	ENSODEG00000004730	SRPRA	100	67.176	Octodon_degus
ENSNBRG00000017311	srpra	100	97.836	ENSONIG00000005324	srpra	100	97.836	Oreochromis_niloticus
ENSNBRG00000017311	srpra	100	67.742	ENSOCUG00000017057	SRPRA	100	67.278	Oryctolagus_cuniculus
ENSNBRG00000017311	srpra	100	83.077	ENSORLG00000014676	srpra	95	96.061	Oryzias_latipes
ENSNBRG00000017311	srpra	100	83.231	ENSORLG00020009240	srpra	100	83.231	Oryzias_latipes_hni
ENSNBRG00000017311	srpra	100	82.923	ENSORLG00015015405	srpra	100	82.923	Oryzias_latipes_hsok
ENSNBRG00000017311	srpra	100	83.846	ENSOMEG00000005872	srpra	100	83.846	Oryzias_melastigma
ENSNBRG00000017311	srpra	100	68.043	ENSOGAG00000008926	SRPRA	100	67.732	Otolemur_garnettii
ENSNBRG00000017311	srpra	100	64.992	ENSOARG00000012397	SRPRA	100	64.894	Ovis_aries
ENSNBRG00000017311	srpra	100	67.841	ENSPPAG00000030813	SRPRA	100	67.737	Pan_paniscus
ENSNBRG00000017311	srpra	100	67.732	ENSPPRG00000001542	SRPRA	100	66.464	Panthera_pardus
ENSNBRG00000017311	srpra	100	67.580	ENSPTIG00000006989	SRPRA	100	66.313	Panthera_tigris_altaica
ENSNBRG00000017311	srpra	100	67.841	ENSPTRG00000028360	SRPRA	100	67.737	Pan_troglodytes
ENSNBRG00000017311	srpra	100	67.994	ENSPANG00000010858	SRPRA	100	67.530	Papio_anubis
ENSNBRG00000017311	srpra	100	76.328	ENSPKIG00000016106	srpra	100	76.631	Paramormyrops_kingsleyae
ENSNBRG00000017311	srpra	94	70.921	ENSPSIG00000012009	SRPRA	100	70.484	Pelodiscus_sinensis
ENSNBRG00000017311	srpra	100	81.510	ENSPMGG00000001393	srpra	100	81.538	Periophthalmus_magnuspinnatus
ENSNBRG00000017311	srpra	100	67.841	ENSPEMG00000018279	Srpr	100	66.514	Peromyscus_maniculatus_bairdii
ENSNBRG00000017311	srpra	99	62.826	ENSPMAG00000009559	srpra	99	61.948	Petromyzon_marinus
ENSNBRG00000017311	srpra	100	66.667	ENSPCIG00000010207	SRPRA	100	67.073	Phascolarctos_cinereus
ENSNBRG00000017311	srpra	100	86.769	ENSPFOG00000003114	srpra	100	86.923	Poecilia_formosa
ENSNBRG00000017311	srpra	100	86.462	ENSPLAG00000007323	srpra	100	86.615	Poecilia_latipinna
ENSNBRG00000017311	srpra	100	86.615	ENSPMEG00000015658	srpra	100	86.769	Poecilia_mexicana
ENSNBRG00000017311	srpra	100	86.308	ENSPREG00000004937	srpra	100	86.462	Poecilia_reticulata
ENSNBRG00000017311	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSNBRG00000017311	srpra	62	90.698	ENSPCAG00000003801	-	63	90.698	Procavia_capensis
ENSNBRG00000017311	srpra	100	67.841	ENSPCOG00000025726	SRPRA	100	67.123	Propithecus_coquereli
ENSNBRG00000017311	srpra	100	67.375	ENSPVAG00000000993	SRPRA	100	66.768	Pteropus_vampyrus
ENSNBRG00000017311	srpra	100	98.918	ENSPNYG00000012371	srpra	100	98.918	Pundamilia_nyererei
ENSNBRG00000017311	srpra	100	79.416	ENSPNAG00000013476	srpra	100	78.834	Pygocentrus_nattereri
ENSNBRG00000017311	srpra	100	67.688	ENSRNOG00000010543	Srpra	100	66.514	Rattus_norvegicus
ENSNBRG00000017311	srpra	100	67.841	ENSRBIG00000008702	SRPRA	100	67.530	Rhinopithecus_bieti
ENSNBRG00000017311	srpra	100	67.994	ENSRROG00000029494	SRPRA	100	67.431	Rhinopithecus_roxellana
ENSNBRG00000017311	srpra	100	67.534	ENSSBOG00000035892	SRPRA	100	67.073	Saimiri_boliviensis_boliviensis
ENSNBRG00000017311	srpra	94	66.186	ENSSHAG00000009168	SRPRA	100	66.290	Sarcophilus_harrisii
ENSNBRG00000017311	srpra	100	73.457	ENSSFOG00015008837	srpra	100	73.118	Scleropages_formosus
ENSNBRG00000017311	srpra	100	74.652	ENSSMAG00000002783	srpra	100	74.769	Scophthalmus_maximus
ENSNBRG00000017311	srpra	100	87.711	ENSSDUG00000013920	srpra	92	88.018	Seriola_dumerili
ENSNBRG00000017311	srpra	100	87.558	ENSSLDG00000008601	srpra	93	87.865	Seriola_lalandi_dorsalis
ENSNBRG00000017311	srpra	81	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSNBRG00000017311	srpra	100	68.437	ENSSPUG00000018221	SRPRA	100	70.183	Sphenodon_punctatus
ENSNBRG00000017311	srpra	100	89.724	ENSSPAG00000005103	srpra	100	89.877	Stegastes_partitus
ENSNBRG00000017311	srpra	100	67.835	ENSSSCG00000015227	SRPRA	100	67.275	Sus_scrofa
ENSNBRG00000017311	srpra	94	70.894	ENSTGUG00000000815	SRPRA	100	69.872	Taeniopygia_guttata
ENSNBRG00000017311	srpra	100	83.846	ENSTRUG00000006856	srpra	100	83.692	Takifugu_rubripes
ENSNBRG00000017311	srpra	100	78.431	ENSTNIG00000010316	srpra	100	78.431	Tetraodon_nigroviridis
ENSNBRG00000017311	srpra	100	67.534	ENSTTRG00000001558	SRPRA	100	67.328	Tursiops_truncatus
ENSNBRG00000017311	srpra	100	67.534	ENSUAMG00000005510	SRPRA	100	66.717	Ursus_americanus
ENSNBRG00000017311	srpra	96	61.709	ENSUMAG00000002269	SRPRA	100	60.842	Ursus_maritimus
ENSNBRG00000017311	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSNBRG00000017311	srpra	100	67.988	ENSVVUG00000020094	SRPRA	100	67.275	Vulpes_vulpes
ENSNBRG00000017311	srpra	100	62.236	ENSXETG00000003920	srpra	100	61.631	Xenopus_tropicalis
ENSNBRG00000017311	srpra	89	91.477	ENSXCOG00000001286	srpra	100	95.495	Xiphophorus_couchianus
ENSNBRG00000017311	srpra	100	86.090	ENSXMAG00000028401	srpra	100	86.090	Xiphophorus_maculatus