EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017346 (Gene tree)
Gene ID: 102795479
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2296 bases
Position: chrJH422305.1:3651475-3653770
Accession: 102795479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022649	GTP_EFTU	PF00009.27	2.1e-26	1	2
ENSNBRP00000022649	GTP_EFTU	PF00009.27	2.1e-26	2	2
ENSNBRP00000022649	GTP_EFTU_D2	PF03144.25	6.9e-14	1	1
ENSNBRP00000022649	GTP_EFTU_D3	PF03143.17	5.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023245	-	1317	XM_006794500	ENSNBRP00000022649	438 (aa)	XP_006794563	-

Gene Model

Click here to download ENSNBRG00000017346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017346	-	96	33.857	ENSNBRG00000002803	GSPT1	78	32.809
ENSNBRG00000017346	-	95	62.585	ENSNBRG00000013552	si:dkey-37o8.1	97	62.585
ENSNBRG00000017346	-	81	84.789	ENSNBRG00000016788	-	87	84.789
ENSNBRG00000017346	-	94	35.945	ENSNBRG00000020095	hbs1l	70	35.945
ENSNBRG00000017346	-	99	76.840	ENSNBRG00000011060	eef1a1b	100	76.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017346	-	97	84.876	ENSAPOG00000004714	-	100	84.989	Acanthochromis_polyacanthus
ENSNBRG00000017346	-	81	97.465	ENSACIG00000001219	-	86	97.465	Amphilophus_citrinellus
ENSNBRG00000017346	-	79	93.605	ENSAOCG00000022002	-	86	93.503	Amphiprion_ocellaris
ENSNBRG00000017346	-	99	79.826	ENSAOCG00000022039	-	100	79.826	Amphiprion_ocellaris
ENSNBRG00000017346	-	99	79.826	ENSAPEG00000016361	-	100	79.826	Amphiprion_percula
ENSNBRG00000017346	-	97	84.257	ENSATEG00000003244	-	97	84.382	Anabas_testudineus
ENSNBRG00000017346	-	100	89.177	ENSACLG00000022560	-	100	89.177	Astatotilapia_calliptera
ENSNBRG00000017346	-	100	72.414	WBGene00001168	eef-1A.1	100	72.414	Caenorhabditis_elegans
ENSNBRG00000017346	-	100	72.414	WBGene00001169	eef-1A.2	100	72.414	Caenorhabditis_elegans
ENSNBRG00000017346	-	99	75.274	ENSCING00000021478	-	99	75.274	Ciona_intestinalis
ENSNBRG00000017346	-	99	67.452	ENSCING00000007703	-	99	67.452	Ciona_intestinalis
ENSNBRG00000017346	-	97	70.833	ENSCING00000005126	-	100	70.815	Ciona_intestinalis
ENSNBRG00000017346	-	97	70.769	ENSCING00000018894	-	99	70.753	Ciona_intestinalis
ENSNBRG00000017346	-	97	72.284	ENSCSAVG00000009663	-	99	72.234	Ciona_savignyi
ENSNBRG00000017346	-	97	71.744	ENSCSAVG00000003196	-	99	71.706	Ciona_savignyi
ENSNBRG00000017346	-	100	75.108	ENSCSAVG00000006357	-	100	75.108	Ciona_savignyi
ENSNBRG00000017346	-	99	66.300	ENSCSAVG00000001085	-	90	66.300	Ciona_savignyi
ENSNBRG00000017346	-	97	82.301	ENSCSEG00000008011	-	100	82.251	Cynoglossus_semilaevis
ENSNBRG00000017346	-	81	81.972	ENSCSEG00000007992	-	86	81.972	Cynoglossus_semilaevis
ENSNBRG00000017346	-	81	83.662	ENSCSEG00000007972	-	86	83.662	Cynoglossus_semilaevis
ENSNBRG00000017346	-	97	84.479	ENSCVAG00000019356	-	100	84.599	Cyprinodon_variegatus
ENSNBRG00000017346	-	100	75.000	FBgn0284245	eEF1alpha1	100	75.000	Drosophila_melanogaster
ENSNBRG00000017346	-	97	75.221	FBgn0000557	eEF1alpha2	100	75.541	Drosophila_melanogaster
ENSNBRG00000017346	-	93	82.456	ENSEBUG00000015814	-	99	72.391	Eptatretus_burgeri
ENSNBRG00000017346	-	99	82.500	ENSFHEG00000015054	-	100	84.599	Fundulus_heteroclitus
ENSNBRG00000017346	-	97	82.965	ENSGAFG00000014646	-	100	83.117	Gambusia_affinis
ENSNBRG00000017346	-	99	82.035	ENSGACG00000002143	-	100	82.035	Gasterosteus_aculeatus
ENSNBRG00000017346	-	97	84.035	ENSGACG00000002182	-	100	84.165	Gasterosteus_aculeatus
ENSNBRG00000017346	-	58	100.000	ENSHBUG00000017166	-	95	100.000	Haplochromis_burtoni
ENSNBRG00000017346	-	97	84.035	ENSHCOG00000008468	-	100	84.165	Hippocampus_comes
ENSNBRG00000017346	-	99	75.870	ENSHCOG00000008489	-	99	75.870	Hippocampus_comes
ENSNBRG00000017346	-	97	81.858	ENSLBEG00000002759	-	100	82.035	Labrus_bergylta
ENSNBRG00000017346	-	99	74.946	ENSLBEG00000002955	-	99	74.946	Labrus_bergylta
ENSNBRG00000017346	-	97	84.922	ENSMAMG00000007715	-	100	85.033	Mastacembelus_armatus
ENSNBRG00000017346	-	97	82.927	ENSMMOG00000001165	-	92	91.111	Mola_mola
ENSNBRG00000017346	-	99	65.721	ENSMMOG00000018160	-	100	65.721	Mola_mola
ENSNBRG00000017346	-	99	75.817	ENSMMOG00000001106	-	99	75.817	Mola_mola
ENSNBRG00000017346	-	75	80.682	ENSONIG00000017760	-	98	80.682	Oreochromis_niloticus
ENSNBRG00000017346	-	97	84.257	ENSORLG00000007614	eef1a	100	84.382	Oryzias_latipes
ENSNBRG00000017346	-	99	82.721	ENSORLG00015002397	-	100	84.599	Oryzias_latipes_hsok
ENSNBRG00000017346	-	97	84.922	ENSOMEG00000018226	-	100	85.033	Oryzias_melastigma
ENSNBRG00000017346	-	94	41.882	ENSPMGG00000022427	-	97	44.475	Periophthalmus_magnuspinnatus
ENSNBRG00000017346	-	98	83.628	ENSPMGG00000023911	-	100	83.731	Periophthalmus_magnuspinnatus
ENSNBRG00000017346	-	97	82.965	ENSPFOG00000003924	-	99	83.117	Poecilia_formosa
ENSNBRG00000017346	-	97	82.965	ENSPLAG00000004316	-	100	83.117	Poecilia_latipinna
ENSNBRG00000017346	-	97	82.743	ENSPMEG00000001010	-	100	82.900	Poecilia_mexicana
ENSNBRG00000017346	-	99	81.573	ENSPREG00000008243	-	100	82.468	Poecilia_reticulata
ENSNBRG00000017346	-	100	89.177	ENSPNYG00000007263	-	100	89.177	Pundamilia_nyererei
ENSNBRG00000017346	-	95	70.362	YPR080W	TEF1	99	69.565	Saccharomyces_cerevisiae
ENSNBRG00000017346	-	95	70.362	YBR118W	TEF2	99	69.565	Saccharomyces_cerevisiae
ENSNBRG00000017346	-	56	90.984	ENSSMAG00000016277	-	100	90.945	Scophthalmus_maximus
ENSNBRG00000017346	-	97	72.363	ENSSMAG00000018469	-	100	72.727	Scophthalmus_maximus
ENSNBRG00000017346	-	97	83.592	ENSSDUG00000008198	-	100	83.731	Seriola_dumerili
ENSNBRG00000017346	-	97	80.531	ENSSPAG00000001710	-	100	80.736	Stegastes_partitus
ENSNBRG00000017346	-	99	76.522	ENSTRUG00000005066	-	99	76.522	Takifugu_rubripes
ENSNBRG00000017346	-	97	83.814	ENSTRUG00000005727	ef-1a	100	83.948	Takifugu_rubripes
ENSNBRG00000017346	-	97	84.922	ENSTNIG00000002619	-	100	85.033	Tetraodon_nigroviridis
ENSNBRG00000017346	-	99	73.203	ENSTNIG00000002617	-	96	73.203	Tetraodon_nigroviridis
ENSNBRG00000017346	-	97	82.965	ENSXCOG00000001542	-	100	83.117	Xiphophorus_couchianus