EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017354 (Gene tree)
Gene ID: -
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: uncharacterized LOC102780188
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6679 bases
Position: chrJH422492.1:138367-145045
Accession: 102780188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022866	NCBP3	PF10309.9	2.5e-21	1	1
ENSNBRP00000022847	NCBP3	PF10309.9	2.7e-21	1	1
ENSNBRP00000022832	NCBP3	PF10309.9	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023464	-	1563	-	ENSNBRP00000022866	520 (aa)	-	-
ENSNBRT00000023430	-	1647	XM_006808285	ENSNBRP00000022832	548 (aa)	XP_006808348	-
ENSNBRT00000023445	-	1626	-	ENSNBRP00000022847	541 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000017354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017354	ncbp3	97	56.176	ENSG00000074356	NCBP3	85	56.322	Homo_sapiens
ENSNBRG00000017354	ncbp3	92	97.959	ENSAPOG00000020809	ncbp3	82	79.814	Acanthochromis_polyacanthus
ENSNBRG00000017354	ncbp3	94	53.672	ENSAMEG00000009372	NCBP3	96	41.806	Ailuropoda_melanoleuca
ENSNBRG00000017354	ncbp3	66	100.000	ENSACIG00000024257	ncbp3	100	60.362	Amphilophus_citrinellus
ENSNBRG00000017354	ncbp3	96	79.503	ENSAPEG00000020857	ncbp3	82	79.503	Amphiprion_percula
ENSNBRG00000017354	ncbp3	95	74.163	ENSATEG00000010801	ncbp3	82	76.453	Anabas_testudineus
ENSNBRG00000017354	ncbp3	88	53.952	ENSAPLG00000007373	NCBP3	85	54.639	Anas_platyrhynchos
ENSNBRG00000017354	ncbp3	88	48.000	ENSANAG00000020550	-	91	34.870	Aotus_nancymaae
ENSNBRG00000017354	ncbp3	89	55.556	ENSANAG00000024918	-	78	56.747	Aotus_nancymaae
ENSNBRG00000017354	ncbp3	96	89.503	ENSACLG00000000455	ncbp3	85	89.427	Astatotilapia_calliptera
ENSNBRG00000017354	ncbp3	80	81.928	ENSAMXG00000005968	ncbp3	86	62.088	Astyanax_mexicanus
ENSNBRG00000017354	ncbp3	94	56.213	ENSBTAG00000016621	NCBP3	83	55.060	Bos_taurus
ENSNBRG00000017354	ncbp3	93	56.433	ENSCAFG00000019371	NCBP3	78	56.891	Canis_familiaris
ENSNBRG00000017354	ncbp3	93	56.433	ENSCAFG00020008143	NCBP3	78	56.891	Canis_lupus_dingo
ENSNBRG00000017354	ncbp3	96	56.805	ENSCHIG00000009002	NCBP3	83	55.060	Capra_hircus
ENSNBRG00000017354	ncbp3	97	55.588	ENSTSYG00000008184	NCBP3	86	55.882	Carlito_syrichta
ENSNBRG00000017354	ncbp3	87	56.584	ENSCAPG00000016045	NCBP3	82	57.295	Cavia_aperea
ENSNBRG00000017354	ncbp3	97	55.882	ENSCPOG00000015529	NCBP3	86	55.588	Cavia_porcellus
ENSNBRG00000017354	ncbp3	97	56.034	ENSCCAG00000021154	NCBP3	85	56.176	Cebus_capucinus
ENSNBRG00000017354	ncbp3	96	56.176	ENSCATG00000013041	NCBP3	79	56.322	Cercocebus_atys
ENSNBRG00000017354	ncbp3	97	56.176	ENSCLAG00000012229	NCBP3	86	55.882	Chinchilla_lanigera
ENSNBRG00000017354	ncbp3	97	52.436	ENSCSAG00000013543	NCBP3	99	40.320	Chlorocebus_sabaeus
ENSNBRG00000017354	ncbp3	98	50.294	ENSCHOG00000012323	NCBP3	86	49.138	Choloepus_hoffmanni
ENSNBRG00000017354	ncbp3	99	54.030	ENSCPBG00000014824	NCBP3	83	58.273	Chrysemys_picta_bellii
ENSNBRG00000017354	ncbp3	86	56.471	ENSCANG00000033561	NCBP3	99	45.738	Colobus_angolensis_palliatus
ENSNBRG00000017354	ncbp3	97	57.143	ENSCGRG00001018538	Ncbp3	85	56.598	Cricetulus_griseus_chok1gshd
ENSNBRG00000017354	ncbp3	86	57.762	ENSCGRG00000015075	Ncbp3	83	58.246	Cricetulus_griseus_crigri
ENSNBRG00000017354	ncbp3	95	69.883	ENSCSEG00000006375	ncbp3	100	53.909	Cynoglossus_semilaevis
ENSNBRG00000017354	ncbp3	100	63.435	ENSCVAG00000020563	ncbp3	89	63.636	Cyprinodon_variegatus
ENSNBRG00000017354	ncbp3	87	83.750	ENSDARG00000044597	ncbp3	80	63.536	Danio_rerio
ENSNBRG00000017354	ncbp3	96	56.034	ENSDNOG00000006490	NCBP3	81	55.460	Dasypus_novemcinctus
ENSNBRG00000017354	ncbp3	99	55.294	ENSDORG00000010141	Ncbp3	86	55.294	Dipodomys_ordii
ENSNBRG00000017354	ncbp3	74	44.161	ENSEBUG00000004541	ncbp3	63	44.891	Eptatretus_burgeri
ENSNBRG00000017354	ncbp3	95	56.471	ENSEASG00005013399	NCBP3	81	55.172	Equus_asinus_asinus
ENSNBRG00000017354	ncbp3	95	56.471	ENSECAG00000008444	NCBP3	81	55.172	Equus_caballus
ENSNBRG00000017354	ncbp3	63	79.167	ENSEEUG00000008573	NCBP3	63	50.000	Erinaceus_europaeus
ENSNBRG00000017354	ncbp3	88	78.947	ENSELUG00000009182	ncbp3	81	61.685	Esox_lucius
ENSNBRG00000017354	ncbp3	94	56.433	ENSFCAG00000007929	NCBP3	83	56.471	Felis_catus
ENSNBRG00000017354	ncbp3	91	58.000	ENSFALG00000006704	NCBP3	84	58.681	Ficedula_albicollis
ENSNBRG00000017354	ncbp3	97	56.176	ENSFDAG00000013355	NCBP3	84	56.176	Fukomys_damarensis
ENSNBRG00000017354	ncbp3	92	73.746	ENSFHEG00000005607	ncbp3	81	71.772	Fundulus_heteroclitus
ENSNBRG00000017354	ncbp3	87	67.266	ENSGMOG00000001007	ncbp3	77	67.041	Gadus_morhua
ENSNBRG00000017354	ncbp3	98	55.522	ENSGALG00000002653	NCBP3	86	55.224	Gallus_gallus
ENSNBRG00000017354	ncbp3	71	77.778	ENSGAFG00000008912	ncbp3	64	77.778	Gambusia_affinis
ENSNBRG00000017354	ncbp3	97	68.732	ENSGACG00000020902	ncbp3	83	67.151	Gasterosteus_aculeatus
ENSNBRG00000017354	ncbp3	99	53.433	ENSGAGG00000014490	NCBP3	84	56.418	Gopherus_agassizii
ENSNBRG00000017354	ncbp3	97	56.047	ENSGGOG00000007496	NCBP3	85	56.196	Gorilla_gorilla
ENSNBRG00000017354	ncbp3	76	80.402	ENSHBUG00000019541	ncbp3	67	81.081	Haplochromis_burtoni
ENSNBRG00000017354	ncbp3	97	56.176	ENSHGLG00000015839	NCBP3	86	55.882	Heterocephalus_glaber_female
ENSNBRG00000017354	ncbp3	97	56.176	ENSHGLG00100007256	NCBP3	86	55.882	Heterocephalus_glaber_male
ENSNBRG00000017354	ncbp3	98	66.389	ENSHCOG00000004161	ncbp3	86	66.479	Hippocampus_comes
ENSNBRG00000017354	ncbp3	84	85.000	ENSIPUG00000024397	ncbp3	81	69.782	Ictalurus_punctatus
ENSNBRG00000017354	ncbp3	67	57.040	ENSSTOG00000002101	NCBP3	78	57.762	Ictidomys_tridecemlineatus
ENSNBRG00000017354	ncbp3	97	45.029	ENSJJAG00000000634	Ncbp3	99	35.588	Jaculus_jaculus
ENSNBRG00000017354	ncbp3	95	68.571	ENSKMAG00000001932	ncbp3	86	68.407	Kryptolebias_marmoratus
ENSNBRG00000017354	ncbp3	98	66.485	ENSLBEG00000001558	-	85	67.313	Labrus_bergylta
ENSNBRG00000017354	ncbp3	94	71.591	ENSLBEG00000006036	ncbp3	84	72.581	Labrus_bergylta
ENSNBRG00000017354	ncbp3	69	71.429	ENSLACG00000018791	NCBP3	63	65.957	Latimeria_chalumnae
ENSNBRG00000017354	ncbp3	95	59.946	ENSLOCG00000006706	ncbp3	84	62.396	Lepisosteus_oculatus
ENSNBRG00000017354	ncbp3	94	56.176	ENSLAFG00000002067	NCBP3	83	55.882	Loxodonta_africana
ENSNBRG00000017354	ncbp3	97	56.765	ENSMFAG00000024176	NCBP3	99	42.605	Macaca_fascicularis
ENSNBRG00000017354	ncbp3	97	56.765	ENSMMUG00000008556	NCBP3	99	42.605	Macaca_mulatta
ENSNBRG00000017354	ncbp3	96	56.765	ENSMNEG00000041374	NCBP3	79	56.322	Macaca_nemestrina
ENSNBRG00000017354	ncbp3	86	56.140	ENSMLEG00000034703	NCBP3	99	41.711	Mandrillus_leucophaeus
ENSNBRG00000017354	ncbp3	97	75.000	ENSMAMG00000022461	ncbp3	84	74.775	Mastacembelus_armatus
ENSNBRG00000017354	ncbp3	96	89.503	ENSMZEG00005027802	ncbp3	85	89.427	Maylandia_zebra
ENSNBRG00000017354	ncbp3	92	59.272	ENSMGAG00000004685	NCBP3	84	57.986	Meleagris_gallopavo
ENSNBRG00000017354	ncbp3	94	51.320	ENSMICG00000015798	NCBP3	99	38.705	Microcebus_murinus
ENSNBRG00000017354	ncbp3	97	57.602	ENSMOCG00000016446	Ncbp3	85	56.857	Microtus_ochrogaster
ENSNBRG00000017354	ncbp3	93	74.847	ENSMMOG00000012577	ncbp3	82	74.468	Mola_mola
ENSNBRG00000017354	ncbp3	96	69.886	ENSMALG00000009173	ncbp3	84	70.000	Monopterus_albus
ENSNBRG00000017354	ncbp3	96	55.882	MGP_CAROLIEiJ_G0016684	Ncbp3	99	42.357	Mus_caroli
ENSNBRG00000017354	ncbp3	96	55.882	ENSMUSG00000020783	Ncbp3	99	42.357	Mus_musculus
ENSNBRG00000017354	ncbp3	96	56.176	MGP_PahariEiJ_G0017817	Ncbp3	99	42.516	Mus_pahari
ENSNBRG00000017354	ncbp3	96	55.882	MGP_SPRETEiJ_G0017521	Ncbp3	99	42.357	Mus_spretus
ENSNBRG00000017354	ncbp3	93	56.725	ENSMPUG00000012357	NCBP3	78	56.765	Mustela_putorius_furo
ENSNBRG00000017354	ncbp3	97	54.867	ENSMLUG00000017060	NCBP3	86	54.572	Myotis_lucifugus
ENSNBRG00000017354	ncbp3	97	55.882	ENSNGAG00000020321	Ncbp3	84	56.176	Nannospalax_galili
ENSNBRG00000017354	ncbp3	97	55.747	ENSNLEG00000017279	NCBP3	85	56.322	Nomascus_leucogenys
ENSNBRG00000017354	ncbp3	65	75.676	ENSMEUG00000015701	-	79	61.290	Notamacropus_eugenii
ENSNBRG00000017354	ncbp3	97	53.529	ENSOPRG00000016925	NCBP3	86	53.824	Ochotona_princeps
ENSNBRG00000017354	ncbp3	97	56.176	ENSODEG00000016617	NCBP3	86	55.588	Octodon_degus
ENSNBRG00000017354	ncbp3	96	86.667	ENSONIG00000007434	ncbp3	82	90.047	Oreochromis_niloticus
ENSNBRG00000017354	ncbp3	99	55.490	ENSOANG00000010109	NCBP3	77	58.681	Ornithorhynchus_anatinus
ENSNBRG00000017354	ncbp3	93	56.471	ENSOCUG00000008045	NCBP3	78	56.471	Oryctolagus_cuniculus
ENSNBRG00000017354	ncbp3	95	69.154	ENSORLG00000013703	ncbp3	85	70.616	Oryzias_latipes
ENSNBRG00000017354	ncbp3	95	68.657	ENSORLG00020011764	ncbp3	85	70.561	Oryzias_latipes_hni
ENSNBRG00000017354	ncbp3	95	69.608	ENSORLG00015018733	ncbp3	85	69.626	Oryzias_latipes_hsok
ENSNBRG00000017354	ncbp3	95	72.059	ENSOMEG00000017858	ncbp3	85	71.495	Oryzias_melastigma
ENSNBRG00000017354	ncbp3	97	56.176	ENSOGAG00000008803	NCBP3	85	55.882	Otolemur_garnettii
ENSNBRG00000017354	ncbp3	76	52.381	ENSOARG00000017750	NCBP3	79	53.812	Ovis_aries
ENSNBRG00000017354	ncbp3	97	55.747	ENSPPAG00000030530	NCBP3	85	56.322	Pan_paniscus
ENSNBRG00000017354	ncbp3	94	56.433	ENSPPRG00000022474	NCBP3	83	56.471	Panthera_pardus
ENSNBRG00000017354	ncbp3	85	55.479	ENSPTIG00000009607	NCBP3	74	57.042	Panthera_tigris_altaica
ENSNBRG00000017354	ncbp3	97	56.176	ENSPTRG00000008578	NCBP3	85	56.322	Pan_troglodytes
ENSNBRG00000017354	ncbp3	97	56.765	ENSPANG00000024364	NCBP3	99	42.468	Papio_anubis
ENSNBRG00000017354	ncbp3	92	74.444	ENSPKIG00000008466	ncbp3	80	58.491	Paramormyrops_kingsleyae
ENSNBRG00000017354	ncbp3	79	51.464	ENSPSIG00000013732	NCBP3	82	50.209	Pelodiscus_sinensis
ENSNBRG00000017354	ncbp3	97	63.018	ENSPMGG00000003344	ncbp3	80	66.096	Periophthalmus_magnuspinnatus
ENSNBRG00000017354	ncbp3	97	56.891	ENSPEMG00000007746	Ncbp3	85	57.307	Peromyscus_maniculatus_bairdii
ENSNBRG00000017354	ncbp3	100	52.925	ENSPCIG00000008605	NCBP3	86	52.925	Phascolarctos_cinereus
ENSNBRG00000017354	ncbp3	84	68.919	ENSPFOG00000000721	ncbp3	82	69.655	Poecilia_formosa
ENSNBRG00000017354	ncbp3	95	70.868	ENSPLAG00000015399	ncbp3	85	71.795	Poecilia_latipinna
ENSNBRG00000017354	ncbp3	95	70.868	ENSPMEG00000000896	ncbp3	85	71.795	Poecilia_mexicana
ENSNBRG00000017354	ncbp3	95	70.588	ENSPREG00000001681	ncbp3	85	71.510	Poecilia_reticulata
ENSNBRG00000017354	ncbp3	96	55.747	ENSPPYG00000007823	NCBP3	81	56.322	Pongo_abelii
ENSNBRG00000017354	ncbp3	96	48.235	ENSPCAG00000012614	NCBP3	99	38.288	Procavia_capensis
ENSNBRG00000017354	ncbp3	94	57.059	ENSPCOG00000016793	NCBP3	99	41.614	Propithecus_coquereli
ENSNBRG00000017354	ncbp3	93	50.000	ENSPVAG00000012746	NCBP3	95	38.250	Pteropus_vampyrus
ENSNBRG00000017354	ncbp3	96	88.462	ENSPNYG00000022677	ncbp3	80	87.864	Pundamilia_nyererei
ENSNBRG00000017354	ncbp3	92	62.155	ENSPNAG00000003219	ncbp3	87	61.918	Pygocentrus_nattereri
ENSNBRG00000017354	ncbp3	96	56.176	ENSRNOG00000018550	Ncbp3	83	55.848	Rattus_norvegicus
ENSNBRG00000017354	ncbp3	97	56.765	ENSRBIG00000033247	NCBP3	99	42.468	Rhinopithecus_bieti
ENSNBRG00000017354	ncbp3	97	56.322	ENSRROG00000043833	NCBP3	99	42.468	Rhinopithecus_roxellana
ENSNBRG00000017354	ncbp3	97	57.353	ENSSBOG00000023178	NCBP3	86	56.176	Saimiri_boliviensis_boliviensis
ENSNBRG00000017354	ncbp3	79	55.251	ENSSHAG00000003466	NCBP3	82	55.251	Sarcophilus_harrisii
ENSNBRG00000017354	ncbp3	90	76.829	ENSSFOG00015005808	ncbp3	84	59.030	Scleropages_formosus
ENSNBRG00000017354	ncbp3	95	68.280	ENSSMAG00000010917	ncbp3	86	69.126	Scophthalmus_maximus
ENSNBRG00000017354	ncbp3	95	77.448	ENSSDUG00000023402	ncbp3	100	60.000	Seriola_dumerili
ENSNBRG00000017354	ncbp3	89	70.588	ENSSLDG00000000742	ncbp3	76	72.674	Seriola_lalandi_dorsalis
ENSNBRG00000017354	ncbp3	82	80.556	ENSSARG00000006634	NCBP3	83	54.412	Sorex_araneus
ENSNBRG00000017354	ncbp3	99	53.134	ENSSPUG00000002240	NCBP3	83	52.836	Sphenodon_punctatus
ENSNBRG00000017354	ncbp3	71	100.000	ENSSPAG00000011223	ncbp3	85	73.617	Stegastes_partitus
ENSNBRG00000017354	ncbp3	97	56.176	ENSSSCG00000017870	NCBP3	86	55.882	Sus_scrofa
ENSNBRG00000017354	ncbp3	97	56.119	ENSTGUG00000005396	NCBP3	86	55.522	Taeniopygia_guttata
ENSNBRG00000017354	ncbp3	94	66.176	ENSTRUG00000003769	ncbp3	100	51.834	Takifugu_rubripes
ENSNBRG00000017354	ncbp3	98	66.867	ENSTNIG00000004776	ncbp3	82	67.273	Tetraodon_nigroviridis
ENSNBRG00000017354	ncbp3	97	46.839	ENSTBEG00000006308	NCBP3	86	47.941	Tupaia_belangeri
ENSNBRG00000017354	ncbp3	85	80.556	ENSTTRG00000005845	NCBP3	73	80.556	Tursiops_truncatus
ENSNBRG00000017354	ncbp3	94	53.631	ENSUAMG00000014043	NCBP3	83	54.213	Ursus_americanus
ENSNBRG00000017354	ncbp3	83	56.738	ENSUMAG00000007519	NCBP3	80	58.511	Ursus_maritimus
ENSNBRG00000017354	ncbp3	93	50.585	ENSVVUG00000026079	NCBP3	77	51.026	Vulpes_vulpes
ENSNBRG00000017354	ncbp3	95	46.961	ENSXETG00000012965	ncbp3	82	49.858	Xenopus_tropicalis
ENSNBRG00000017354	ncbp3	92	73.585	ENSXCOG00000018393	ncbp3	100	57.767	Xiphophorus_couchianus
ENSNBRG00000017354	ncbp3	95	69.274	ENSXMAG00000006849	ncbp3	85	70.455	Xiphophorus_maculatus