EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017460 (Gene tree)
Gene ID: 102781096
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2111 bases
Position: chrJH422338.1:2500944-2503054
Accession: 102781096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022811	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023409	-	780	XM_006799626	ENSNBRP00000022811	259 (aa)	XP_006799689	-

Gene Model

Click here to download ENSNBRG00000017460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017460	-	100	53.025	ENSNBRG00000001747	alyref	100	54.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017460	-	100	72.624	ENSAPOG00000000183	-	100	71.863	Acanthochromis_polyacanthus
ENSNBRG00000017460	-	99	53.261	ENSACIG00000006351	alyref	98	54.122	Amphilophus_citrinellus
ENSNBRG00000017460	-	100	77.695	ENSACIG00000020351	-	100	78.439	Amphilophus_citrinellus
ENSNBRG00000017460	-	100	55.755	ENSAOCG00000014012	alyref	100	56.835	Amphiprion_ocellaris
ENSNBRG00000017460	-	100	71.483	ENSAOCG00000019305	-	100	71.483	Amphiprion_ocellaris
ENSNBRG00000017460	-	100	55.755	ENSAPEG00000014603	alyref	100	56.835	Amphiprion_percula
ENSNBRG00000017460	-	100	71.103	ENSAPEG00000013527	-	100	71.103	Amphiprion_percula
ENSNBRG00000017460	-	100	52.817	ENSATEG00000004307	alyref	100	54.225	Anabas_testudineus
ENSNBRG00000017460	-	100	68.302	ENSATEG00000000382	-	100	67.925	Anabas_testudineus
ENSNBRG00000017460	-	52	59.854	ENSAPLG00000014745	-	99	60.714	Anas_platyrhynchos
ENSNBRG00000017460	-	100	53.405	ENSACLG00000008432	alyref	100	54.286	Astatotilapia_calliptera
ENSNBRG00000017460	-	100	98.467	ENSACLG00000010184	-	100	98.467	Astatotilapia_calliptera
ENSNBRG00000017460	-	100	54.930	ENSAMXG00000007359	alyref	100	54.196	Astyanax_mexicanus
ENSNBRG00000017460	-	99	43.609	ENSCING00000013568	-	99	42.909	Ciona_intestinalis
ENSNBRG00000017460	-	99	44.528	ENSCSAVG00000003324	-	99	44.737	Ciona_savignyi
ENSNBRG00000017460	-	100	55.957	ENSCSEG00000017800	alyref	100	56.159	Cynoglossus_semilaevis
ENSNBRG00000017460	-	100	61.742	ENSCVAG00000007789	-	100	62.500	Cyprinodon_variegatus
ENSNBRG00000017460	-	100	56.000	ENSCVAG00000014869	alyref	100	54.874	Cyprinodon_variegatus
ENSNBRG00000017460	-	100	58.042	ENSDARG00000077732	alyref	100	57.544	Danio_rerio
ENSNBRG00000017460	-	99	46.494	ENSEBUG00000008253	alyref	95	42.143	Eptatretus_burgeri
ENSNBRG00000017460	-	100	42.857	ENSEBUG00000006305	alyref	100	43.130	Eptatretus_burgeri
ENSNBRG00000017460	-	100	61.940	ENSELUG00000008849	-	100	61.567	Esox_lucius
ENSNBRG00000017460	-	100	54.839	ENSELUG00000017178	alyref	100	54.676	Esox_lucius
ENSNBRG00000017460	-	61	62.577	ENSFALG00000011923	-	96	63.694	Ficedula_albicollis
ENSNBRG00000017460	-	100	63.258	ENSFHEG00000004698	-	100	64.015	Fundulus_heteroclitus
ENSNBRG00000017460	-	100	54.710	ENSFHEG00000019426	alyref	100	56.522	Fundulus_heteroclitus
ENSNBRG00000017460	-	74	63.452	ENSGMOG00000013122	-	100	60.406	Gadus_morhua
ENSNBRG00000017460	-	100	52.555	ENSGMOG00000009882	alyref	100	52.190	Gadus_morhua
ENSNBRG00000017460	-	100	60.606	ENSGAFG00000007573	-	100	58.333	Gambusia_affinis
ENSNBRG00000017460	-	100	54.035	ENSGAFG00000006014	alyref	100	53.901	Gambusia_affinis
ENSNBRG00000017460	-	100	97.358	ENSHBUG00000001454	-	100	97.358	Haplochromis_burtoni
ENSNBRG00000017460	-	100	53.405	ENSHBUG00000020196	alyref	100	54.286	Haplochromis_burtoni
ENSNBRG00000017460	-	99	62.162	ENSHCOG00000012825	-	94	60.311	Hippocampus_comes
ENSNBRG00000017460	-	100	58.511	ENSIPUG00000009469	alyref	99	56.989	Ictalurus_punctatus
ENSNBRG00000017460	-	79	53.555	ENSSTOG00000016570	-	99	47.982	Ictidomys_tridecemlineatus
ENSNBRG00000017460	-	100	65.152	ENSKMAG00000006462	-	100	64.773	Kryptolebias_marmoratus
ENSNBRG00000017460	-	100	54.122	ENSKMAG00000008912	alyref	100	56.989	Kryptolebias_marmoratus
ENSNBRG00000017460	-	100	54.440	ENSLBEG00000023118	alyref	90	56.757	Labrus_bergylta
ENSNBRG00000017460	-	100	65.714	ENSLBEG00000005387	-	100	65.233	Labrus_bergylta
ENSNBRG00000017460	-	99	66.160	ENSLBEG00000012930	-	99	65.779	Labrus_bergylta
ENSNBRG00000017460	-	83	56.881	ENSLOCG00000013879	alyref	88	56.364	Lepisosteus_oculatus
ENSNBRG00000017460	-	100	66.920	ENSMAMG00000005464	-	100	66.540	Mastacembelus_armatus
ENSNBRG00000017460	-	100	55.197	ENSMAMG00000003034	alyref	100	55.036	Mastacembelus_armatus
ENSNBRG00000017460	-	100	97.318	ENSMZEG00005012096	-	100	97.318	Maylandia_zebra
ENSNBRG00000017460	-	100	53.405	ENSMZEG00005008639	alyref	100	54.286	Maylandia_zebra
ENSNBRG00000017460	-	99	54.212	ENSMMOG00000012458	alyref	97	55.396	Mola_mola
ENSNBRG00000017460	-	99	54.340	ENSMMOG00000007032	-	98	51.711	Mola_mola
ENSNBRG00000017460	-	100	68.401	ENSMALG00000006054	-	100	65.299	Monopterus_albus
ENSNBRG00000017460	-	98	44.291	ENSMLUG00000022467	-	70	49.275	Myotis_lucifugus
ENSNBRG00000017460	-	76	51.515	ENSMLUG00000028605	-	98	44.876	Myotis_lucifugus
ENSNBRG00000017460	-	100	48.797	ENSMLUG00000014372	-	100	48.227	Myotis_lucifugus
ENSNBRG00000017460	-	98	43.728	ENSMLUG00000009247	-	98	42.857	Myotis_lucifugus
ENSNBRG00000017460	-	98	44.964	ENSMLUG00000022178	-	69	50.505	Myotis_lucifugus
ENSNBRG00000017460	-	98	45.583	ENSMLUG00000030671	-	69	51.485	Myotis_lucifugus
ENSNBRG00000017460	-	100	49.110	ENSMLUG00000004098	-	100	48.727	Myotis_lucifugus
ENSNBRG00000017460	-	100	48.754	ENSMLUG00000006521	-	100	50.357	Myotis_lucifugus
ENSNBRG00000017460	-	100	54.440	ENSNGAG00000022014	-	100	55.939	Nannospalax_galili
ENSNBRG00000017460	-	100	53.169	ENSONIG00000019434	alyref	100	54.225	Oreochromis_niloticus
ENSNBRG00000017460	-	100	95.437	ENSONIG00000003296	-	100	95.437	Oreochromis_niloticus
ENSNBRG00000017460	-	99	57.895	ENSORLG00000001620	-	88	55.116	Oryzias_latipes
ENSNBRG00000017460	-	99	67.681	ENSORLG00020015673	-	99	64.639	Oryzias_latipes_hni
ENSNBRG00000017460	-	100	50.000	ENSORLG00020011942	alyref	100	53.571	Oryzias_latipes_hni
ENSNBRG00000017460	-	99	70.076	ENSORLG00015015143	-	99	66.667	Oryzias_latipes_hsok
ENSNBRG00000017460	-	100	50.345	ENSORLG00015022664	alyref	100	53.597	Oryzias_latipes_hsok
ENSNBRG00000017460	-	99	66.409	ENSOMEG00000007158	-	97	64.341	Oryzias_melastigma
ENSNBRG00000017460	-	100	54.676	ENSOMEG00000019176	alyref	100	55.435	Oryzias_melastigma
ENSNBRG00000017460	-	74	59.375	ENSPPAG00000036403	-	68	58.333	Pan_paniscus
ENSNBRG00000017460	-	100	55.516	ENSPKIG00000007070	alyref	100	54.804	Paramormyrops_kingsleyae
ENSNBRG00000017460	-	99	55.351	ENSPKIG00000006233	-	81	55.639	Paramormyrops_kingsleyae
ENSNBRG00000017460	-	66	60.345	ENSPMGG00000012994	-	93	59.538	Periophthalmus_magnuspinnatus
ENSNBRG00000017460	-	99	53.237	ENSPMGG00000016600	alyref	90	55.678	Periophthalmus_magnuspinnatus
ENSNBRG00000017460	-	100	54.198	ENSPEMG00000016628	-	100	52.510	Peromyscus_maniculatus_bairdii
ENSNBRG00000017460	-	100	61.742	ENSPFOG00000017094	-	100	62.500	Poecilia_formosa
ENSNBRG00000017460	-	100	54.930	ENSPFOG00000022825	alyref	99	54.610	Poecilia_formosa
ENSNBRG00000017460	-	100	55.830	ENSPLAG00000006948	alyref	100	54.804	Poecilia_latipinna
ENSNBRG00000017460	-	100	61.742	ENSPLAG00000014380	-	100	62.500	Poecilia_latipinna
ENSNBRG00000017460	-	100	54.930	ENSPMEG00000003547	alyref	100	54.610	Poecilia_mexicana
ENSNBRG00000017460	-	100	61.742	ENSPMEG00000023039	-	100	62.500	Poecilia_mexicana
ENSNBRG00000017460	-	100	55.830	ENSPREG00000015795	alyref	100	54.804	Poecilia_reticulata
ENSNBRG00000017460	-	100	61.217	ENSPREG00000003649	-	100	61.977	Poecilia_reticulata
ENSNBRG00000017460	-	100	53.405	ENSPNYG00000017498	alyref	100	54.286	Pundamilia_nyererei
ENSNBRG00000017460	-	99	94.141	ENSPNYG00000002879	-	98	94.163	Pundamilia_nyererei
ENSNBRG00000017460	-	100	54.355	ENSPNAG00000002531	alyref	100	52.431	Pygocentrus_nattereri
ENSNBRG00000017460	-	75	60.000	ENSSBOG00000030924	-	84	58.974	Saimiri_boliviensis_boliviensis
ENSNBRG00000017460	-	99	46.183	ENSSHAG00000000609	-	99	44.186	Sarcophilus_harrisii
ENSNBRG00000017460	-	99	44.014	ENSSHAG00000012866	-	72	47.549	Sarcophilus_harrisii
ENSNBRG00000017460	-	83	60.550	ENSSFOG00015003923	alyref	72	60.185	Scleropages_formosus
ENSNBRG00000017460	-	75	57.789	ENSSFOG00015003678	alyref	83	58.462	Scleropages_formosus
ENSNBRG00000017460	-	100	55.516	ENSSMAG00000009283	alyref	100	56.584	Scophthalmus_maximus
ENSNBRG00000017460	-	100	66.045	ENSSMAG00000011169	-	100	67.910	Scophthalmus_maximus
ENSNBRG00000017460	-	100	55.755	ENSSDUG00000016158	alyref	100	57.194	Seriola_dumerili
ENSNBRG00000017460	-	100	53.571	ENSSLDG00000017803	alyref	100	55.197	Seriola_lalandi_dorsalis
ENSNBRG00000017460	-	99	72.031	ENSSPAG00000017028	-	96	74.231	Stegastes_partitus
ENSNBRG00000017460	-	100	62.868	ENSTRUG00000003051	-	100	60.370	Takifugu_rubripes
ENSNBRG00000017460	-	100	51.439	ENSTNIG00000011595	alyref	100	53.962	Tetraodon_nigroviridis
ENSNBRG00000017460	-	100	62.738	ENSTNIG00000014136	-	100	57.252	Tetraodon_nigroviridis
ENSNBRG00000017460	-	76	60.204	ENSVVUG00000000272	-	82	59.487	Vulpes_vulpes
ENSNBRG00000017460	-	99	53.191	ENSXCOG00000018047	alyref	99	52.482	Xiphophorus_couchianus
ENSNBRG00000017460	-	99	53.191	ENSXMAG00000012218	alyref	99	52.482	Xiphophorus_maculatus
ENSNBRG00000017460	-	100	62.121	ENSXMAG00000018086	-	100	62.500	Xiphophorus_maculatus