EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017479 (Gene tree)
Gene ID: 102797747
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor%2C proline- and glutamine-rich-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 19085 bases
Position: chrJH422305.1:3755495-3774579
Accession: 102797747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022849	RRM_1	PF00076.22	1.1e-30	1	2
ENSNBRP00000022849	RRM_1	PF00076.22	1.1e-30	2	2
ENSNBRP00000022864	RRM_1	PF00076.22	1.3e-30	1	2
ENSNBRP00000022864	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023447	-	2841	-	ENSNBRP00000022849	637 (aa)	-	-
ENSNBRT00000023462	-	2126	XM_006794430	ENSNBRP00000022864	665 (aa)	XP_006794493	UPI0003EBD7F3

Gene Model

Click here to download ENSNBRG00000017479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017479	sfpq	50	60.252	ENSNBRG00000014059	pspc1	74	59.627
ENSNBRG00000017479	sfpq	59	60.263	ENSNBRG00000017083	nono	89	60.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017479	sfpq	64	73.756	ENSG00000116560	SFPQ	89	74.372	Homo_sapiens
ENSNBRG00000017479	sfpq	70	86.910	ENSAPOG00000024257	sfpq	100	79.565	Acanthochromis_polyacanthus
ENSNBRG00000017479	sfpq	57	79.726	ENSAMEG00000000815	SFPQ	100	73.469	Ailuropoda_melanoleuca
ENSNBRG00000017479	sfpq	100	84.155	ENSACIG00000000905	sfpq	100	84.006	Amphilophus_citrinellus
ENSNBRG00000017479	sfpq	71	85.865	ENSAOCG00000002889	sfpq	100	78.249	Amphiprion_ocellaris
ENSNBRG00000017479	sfpq	71	85.865	ENSAPEG00000016556	sfpq	100	78.249	Amphiprion_percula
ENSNBRG00000017479	sfpq	100	75.704	ENSATEG00000002981	sfpq	100	77.367	Anabas_testudineus
ENSNBRG00000017479	sfpq	64	60.455	ENSANAG00000027438	-	90	50.171	Aotus_nancymaae
ENSNBRG00000017479	sfpq	50	51.549	ENSANAG00000021268	-	100	51.130	Aotus_nancymaae
ENSNBRG00000017479	sfpq	50	54.857	ENSANAG00000037798	-	99	53.714	Aotus_nancymaae
ENSNBRG00000017479	sfpq	100	97.474	ENSACLG00000022332	sfpq	100	97.474	Astatotilapia_calliptera
ENSNBRG00000017479	sfpq	63	81.499	ENSAMXG00000011538	sfpq	94	63.706	Astyanax_mexicanus
ENSNBRG00000017479	sfpq	64	73.756	ENSBTAG00000016328	SFPQ	98	55.731	Bos_taurus
ENSNBRG00000017479	sfpq	64	73.756	ENSCJAG00000001431	SFPQ	96	54.208	Callithrix_jacchus
ENSNBRG00000017479	sfpq	64	73.423	ENSCAFG00000003595	-	84	62.565	Canis_familiaris
ENSNBRG00000017479	sfpq	61	71.392	ENSCAFG00000017608	-	82	57.732	Canis_familiaris
ENSNBRG00000017479	sfpq	64	70.068	ENSCAFG00000018271	-	83	59.511	Canis_familiaris
ENSNBRG00000017479	sfpq	50	66.286	ENSCAFG00020010702	-	100	64.986	Canis_lupus_dingo
ENSNBRG00000017479	sfpq	64	70.068	ENSCAFG00020004881	-	83	59.686	Canis_lupus_dingo
ENSNBRG00000017479	sfpq	64	73.756	ENSCHIG00000023097	SFPQ	89	57.614	Capra_hircus
ENSNBRG00000017479	sfpq	50	71.875	ENSTSYG00000037120	-	100	71.591	Carlito_syrichta
ENSNBRG00000017479	sfpq	50	61.782	ENSTSYG00000035106	-	98	62.069	Carlito_syrichta
ENSNBRG00000017479	sfpq	50	63.818	ENSCPOG00000015018	-	100	63.361	Cavia_porcellus
ENSNBRG00000017479	sfpq	64	73.756	ENSCCAG00000029361	-	79	61.632	Cebus_capucinus
ENSNBRG00000017479	sfpq	57	77.596	ENSCATG00000036179	-	73	62.062	Cercocebus_atys
ENSNBRG00000017479	sfpq	64	50.334	ENSCATG00000032664	-	78	43.127	Cercocebus_atys
ENSNBRG00000017479	sfpq	50	71.875	ENSCLAG00000009583	-	100	71.591	Chinchilla_lanigera
ENSNBRG00000017479	sfpq	64	73.756	ENSCSAG00000001082	SFPQ	79	62.045	Chlorocebus_sabaeus
ENSNBRG00000017479	sfpq	55	72.441	ENSCHOG00000009131	SFPQ	100	73.228	Choloepus_hoffmanni
ENSNBRG00000017479	sfpq	65	70.833	ENSCPBG00000018674	SFPQ	81	64.366	Chrysemys_picta_bellii
ENSNBRG00000017479	sfpq	50	71.875	ENSCANG00000028087	-	100	71.591	Colobus_angolensis_palliatus
ENSNBRG00000017479	sfpq	64	72.973	ENSCGRG00001011698	Sfpq	98	55.476	Cricetulus_griseus_chok1gshd
ENSNBRG00000017479	sfpq	62	73.721	ENSCGRG00000010128	Sfpq	95	73.550	Cricetulus_griseus_crigri
ENSNBRG00000017479	sfpq	100	68.328	ENSCSEG00000007852	sfpq	100	68.475	Cynoglossus_semilaevis
ENSNBRG00000017479	sfpq	100	65.733	ENSCVAG00000019538	sfpq	100	66.043	Cyprinodon_variegatus
ENSNBRG00000017479	sfpq	95	60.465	ENSDARG00000011564	sfpq	100	85.217	Danio_rerio
ENSNBRG00000017479	sfpq	64	73.756	ENSDNOG00000049454	SFPQ	86	59.704	Dasypus_novemcinctus
ENSNBRG00000017479	sfpq	64	73.529	ENSDORG00000008109	Sfpq	79	62.045	Dipodomys_ordii
ENSNBRG00000017479	sfpq	62	67.981	ENSETEG00000001095	SFPQ	61	65.011	Echinops_telfairi
ENSNBRG00000017479	sfpq	64	73.756	ENSEASG00005012012	SFPQ	98	55.603	Equus_asinus_asinus
ENSNBRG00000017479	sfpq	64	73.756	ENSECAG00000000642	SFPQ	98	55.603	Equus_caballus
ENSNBRG00000017479	sfpq	65	78.341	ENSELUG00000023145	sfpq	96	62.462	Esox_lucius
ENSNBRG00000017479	sfpq	64	73.756	ENSFCAG00000042862	SFPQ	98	56.604	Felis_catus
ENSNBRG00000017479	sfpq	50	71.023	ENSFALG00000000731	SFPQ	100	70.170	Ficedula_albicollis
ENSNBRG00000017479	sfpq	50	63.173	ENSFDAG00000017723	-	100	64.873	Fukomys_damarensis
ENSNBRG00000017479	sfpq	100	66.756	ENSFHEG00000015200	sfpq	100	66.086	Fundulus_heteroclitus
ENSNBRG00000017479	sfpq	62	82.339	ENSGMOG00000011957	sfpq	99	65.926	Gadus_morhua
ENSNBRG00000017479	sfpq	84	84.010	ENSGMOG00000011950	SFPQ	99	84.010	Gadus_morhua
ENSNBRG00000017479	sfpq	62	73.782	ENSGALG00000002514	SFPQ	87	61.897	Gallus_gallus
ENSNBRG00000017479	sfpq	100	70.904	ENSGAFG00000014571	sfpq	100	70.014	Gambusia_affinis
ENSNBRG00000017479	sfpq	100	75.334	ENSGACG00000002034	sfpq	100	74.443	Gasterosteus_aculeatus
ENSNBRG00000017479	sfpq	62	74.478	ENSGGOG00000026354	SFPQ	100	71.591	Gorilla_gorilla
ENSNBRG00000017479	sfpq	100	97.177	ENSHBUG00000016818	sfpq	100	97.177	Haplochromis_burtoni
ENSNBRG00000017479	sfpq	64	73.034	ENSHGLG00000012001	SFPQ	80	61.552	Heterocephalus_glaber_female
ENSNBRG00000017479	sfpq	50	71.875	ENSHGLG00100004136	-	100	71.591	Heterocephalus_glaber_male
ENSNBRG00000017479	sfpq	90	79.576	ENSHCOG00000008612	sfpq	100	76.794	Hippocampus_comes
ENSNBRG00000017479	sfpq	64	77.494	ENSIPUG00000013076	SFPQ	87	65.116	Ictalurus_punctatus
ENSNBRG00000017479	sfpq	50	71.875	ENSSTOG00000014004	-	100	71.591	Ictidomys_tridecemlineatus
ENSNBRG00000017479	sfpq	64	73.756	ENSJJAG00000015633	Sfpq	82	62.158	Jaculus_jaculus
ENSNBRG00000017479	sfpq	100	79.747	ENSKMAG00000000238	sfpq	90	78.143	Kryptolebias_marmoratus
ENSNBRG00000017479	sfpq	100	69.871	ENSLBEG00000003163	sfpq	98	69.814	Labrus_bergylta
ENSNBRG00000017479	sfpq	76	62.335	ENSLACG00000014728	SFPQ	92	60.209	Latimeria_chalumnae
ENSNBRG00000017479	sfpq	89	59.718	ENSLOCG00000001067	sfpq	86	65.000	Lepisosteus_oculatus
ENSNBRG00000017479	sfpq	64	73.529	ENSLAFG00000015951	SFPQ	86	60.976	Loxodonta_africana
ENSNBRG00000017479	sfpq	64	73.756	ENSMFAG00000000797	SFPQ	79	62.392	Macaca_fascicularis
ENSNBRG00000017479	sfpq	64	73.756	ENSMMUG00000019154	SFPQ	79	62.392	Macaca_mulatta
ENSNBRG00000017479	sfpq	64	73.756	ENSMNEG00000038895	SFPQ	79	62.045	Macaca_nemestrina
ENSNBRG00000017479	sfpq	50	69.034	ENSMLEG00000010643	-	100	69.886	Mandrillus_leucophaeus
ENSNBRG00000017479	sfpq	100	78.125	ENSMAMG00000007875	sfpq	100	77.976	Mastacembelus_armatus
ENSNBRG00000017479	sfpq	100	98.496	ENSMZEG00005026091	sfpq	100	98.496	Maylandia_zebra
ENSNBRG00000017479	sfpq	51	75.298	ENSMGAG00000004237	SFPQ	100	69.388	Meleagris_gallopavo
ENSNBRG00000017479	sfpq	64	72.973	ENSMAUG00000006402	Sfpq	89	57.911	Mesocricetus_auratus
ENSNBRG00000017479	sfpq	64	73.529	ENSMICG00000027265	SFPQ	79	62.045	Microcebus_murinus
ENSNBRG00000017479	sfpq	64	70.045	ENSMOCG00000019075	Sfpq	91	70.495	Microtus_ochrogaster
ENSNBRG00000017479	sfpq	100	78.060	ENSMMOG00000001074	sfpq	100	75.299	Mola_mola
ENSNBRG00000017479	sfpq	64	73.469	ENSMODG00000017937	SFPQ	80	64.845	Monodelphis_domestica
ENSNBRG00000017479	sfpq	100	75.668	ENSMALG00000010381	sfpq	100	75.223	Monopterus_albus
ENSNBRG00000017479	sfpq	64	73.077	MGP_CAROLIEiJ_G0026487	Sfpq	90	57.753	Mus_caroli
ENSNBRG00000017479	sfpq	64	73.077	ENSMUSG00000028820	Sfpq	90	57.845	Mus_musculus
ENSNBRG00000017479	sfpq	64	73.077	MGP_PahariEiJ_G0028818	Sfpq	81	60.374	Mus_pahari
ENSNBRG00000017479	sfpq	64	73.077	MGP_SPRETEiJ_G0027466	Sfpq	90	57.845	Mus_spretus
ENSNBRG00000017479	sfpq	63	72.955	ENSMLUG00000027090	SFPQ	98	72.727	Myotis_lucifugus
ENSNBRG00000017479	sfpq	64	73.303	ENSNGAG00000000888	Sfpq	63	72.748	Nannospalax_galili
ENSNBRG00000017479	sfpq	50	71.875	ENSNLEG00000035521	-	100	71.591	Nomascus_leucogenys
ENSNBRG00000017479	sfpq	63	73.744	ENSMEUG00000014082	SFPQ	63	74.150	Notamacropus_eugenii
ENSNBRG00000017479	sfpq	64	73.529	ENSOPRG00000013696	SFPQ	63	73.815	Ochotona_princeps
ENSNBRG00000017479	sfpq	62	64.303	ENSODEG00000005485	SFPQ	78	63.256	Octodon_degus
ENSNBRG00000017479	sfpq	100	96.712	ENSONIG00000017737	sfpq	100	96.412	Oreochromis_niloticus
ENSNBRG00000017479	sfpq	50	72.650	ENSOANG00000008789	-	100	72.365	Ornithorhynchus_anatinus
ENSNBRG00000017479	sfpq	57	79.945	ENSOCUG00000001877	SFPQ	88	72.870	Oryctolagus_cuniculus
ENSNBRG00000017479	sfpq	100	68.587	ENSORLG00000007459	sfpq	100	69.793	Oryzias_latipes
ENSNBRG00000017479	sfpq	100	69.368	ENSORLG00020011818	sfpq	100	70.014	Oryzias_latipes_hni
ENSNBRG00000017479	sfpq	100	68.861	ENSORLG00015002131	sfpq	100	68.011	Oryzias_latipes_hsok
ENSNBRG00000017479	sfpq	100	69.418	ENSOMEG00000018020	sfpq	100	68.157	Oryzias_melastigma
ENSNBRG00000017479	sfpq	64	73.756	ENSOGAG00000027710	SFPQ	98	65.242	Otolemur_garnettii
ENSNBRG00000017479	sfpq	62	74.246	ENSOARG00000019439	SFPQ	66	74.014	Ovis_aries
ENSNBRG00000017479	sfpq	64	73.756	ENSPPAG00000030078	SFPQ	62	73.198	Pan_paniscus
ENSNBRG00000017479	sfpq	50	71.671	ENSPPRG00000015478	-	100	71.388	Panthera_pardus
ENSNBRG00000017479	sfpq	50	71.875	ENSPTIG00000007710	-	100	71.591	Panthera_tigris_altaica
ENSNBRG00000017479	sfpq	64	68.100	ENSPTRG00000000518	SFPQ	78	57.539	Pan_troglodytes
ENSNBRG00000017479	sfpq	64	73.529	ENSPANG00000005380	SFPQ	66	73.874	Papio_anubis
ENSNBRG00000017479	sfpq	74	73.307	ENSPKIG00000023035	sfpq	91	68.036	Paramormyrops_kingsleyae
ENSNBRG00000017479	sfpq	62	73.782	ENSPSIG00000011494	SFPQ	99	72.622	Pelodiscus_sinensis
ENSNBRG00000017479	sfpq	100	63.623	ENSPMGG00000023883	sfpq	100	64.170	Periophthalmus_magnuspinnatus
ENSNBRG00000017479	sfpq	64	72.748	ENSPEMG00000009794	Sfpq	91	73.423	Peromyscus_maniculatus_bairdii
ENSNBRG00000017479	sfpq	50	72.871	ENSPMAG00000005583	sfpq	96	59.129	Petromyzon_marinus
ENSNBRG00000017479	sfpq	64	73.589	ENSPCIG00000000923	SFPQ	82	61.986	Phascolarctos_cinereus
ENSNBRG00000017479	sfpq	100	68.601	ENSPFOG00000003127	sfpq	100	72.997	Poecilia_formosa
ENSNBRG00000017479	sfpq	100	68.524	ENSPREG00000008060	sfpq	100	68.333	Poecilia_reticulata
ENSNBRG00000017479	sfpq	64	73.756	ENSPPYG00000001560	SFPQ	79	61.872	Pongo_abelii
ENSNBRG00000017479	sfpq	62	73.953	ENSPCAG00000006164	SFPQ	60	74.419	Procavia_capensis
ENSNBRG00000017479	sfpq	64	73.756	ENSPCOG00000027127	SFPQ	79	62.045	Propithecus_coquereli
ENSNBRG00000017479	sfpq	64	71.719	ENSPVAG00000001865	SFPQ	98	54.797	Pteropus_vampyrus
ENSNBRG00000017479	sfpq	100	95.888	ENSPNYG00000007494	sfpq	100	95.595	Pundamilia_nyererei
ENSNBRG00000017479	sfpq	77	73.062	ENSPNAG00000002128	sfpq	89	69.636	Pygocentrus_nattereri
ENSNBRG00000017479	sfpq	64	73.077	ENSRNOG00000058461	Sfpq	83	60.168	Rattus_norvegicus
ENSNBRG00000017479	sfpq	63	67.195	ENSRBIG00000035286	SFPQ	100	71.591	Rhinopithecus_bieti
ENSNBRG00000017479	sfpq	64	73.529	ENSRROG00000040992	SFPQ	100	71.591	Rhinopithecus_roxellana
ENSNBRG00000017479	sfpq	50	71.875	ENSSBOG00000024972	-	100	71.591	Saimiri_boliviensis_boliviensis
ENSNBRG00000017479	sfpq	50	70.000	ENSSHAG00000012312	-	100	68.857	Sarcophilus_harrisii
ENSNBRG00000017479	sfpq	59	76.104	ENSSHAG00000016107	-	96	69.866	Sarcophilus_harrisii
ENSNBRG00000017479	sfpq	68	77.204	ENSSFOG00015009289	sfpq	83	77.632	Scleropages_formosus
ENSNBRG00000017479	sfpq	100	73.568	ENSSMAG00000018201	sfpq	100	73.568	Scophthalmus_maximus
ENSNBRG00000017479	sfpq	100	80.120	ENSSDUG00000008402	sfpq	100	80.120	Seriola_dumerili
ENSNBRG00000017479	sfpq	100	79.583	ENSSLDG00000018917	sfpq	100	79.732	Seriola_lalandi_dorsalis
ENSNBRG00000017479	sfpq	53	73.171	ENSSARG00000006409	SFPQ	100	72.900	Sorex_araneus
ENSNBRG00000017479	sfpq	100	82.448	ENSSPAG00000016550	sfpq	100	83.631	Stegastes_partitus
ENSNBRG00000017479	sfpq	64	73.756	ENSSSCG00000035690	SFPQ	98	55.652	Sus_scrofa
ENSNBRG00000017479	sfpq	62	73.318	ENSTGUG00000001722	SFPQ	99	72.622	Taeniopygia_guttata
ENSNBRG00000017479	sfpq	100	73.623	ENSTRUG00000003783	sfpq	100	76.374	Takifugu_rubripes
ENSNBRG00000017479	sfpq	87	76.592	ENSTNIG00000011331	sfpq	99	73.453	Tetraodon_nigroviridis
ENSNBRG00000017479	sfpq	53	81.899	ENSTTRG00000013930	SFPQ	63	70.655	Tursiops_truncatus
ENSNBRG00000017479	sfpq	50	69.602	ENSUMAG00000008056	-	100	69.318	Ursus_maritimus
ENSNBRG00000017479	sfpq	50	65.616	ENSVVUG00000000874	-	100	66.189	Vulpes_vulpes
ENSNBRG00000017479	sfpq	68	67.296	ENSXETG00000009682	sfpq	99	78.552	Xenopus_tropicalis
ENSNBRG00000017479	sfpq	100	69.883	ENSXMAG00000016391	sfpq	100	69.107	Xiphophorus_maculatus