EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017490 (Gene tree)
Gene ID: 102786915
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 6005 bases
Position: chrJH422401.1:1316308-1322312
Accession: 102786915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022873	HARE-HTH	PF05066.13	8.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023483	-	318	-	ENSNBRP00000022884	105 (aa)	-	-
ENSNBRT00000023471	-	1587	XM_006804658	ENSNBRP00000022873	528 (aa)	XP_006804721	-

Gene Model

Click here to download ENSNBRG00000017490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017490	tbrg1	100	89.720	ENSAPOG00000017352	tbrg1	98	89.720	Acanthochromis_polyacanthus
ENSNBRG00000017490	tbrg1	95	92.063	ENSACIG00000021274	tbrg1	94	90.675	Amphilophus_citrinellus
ENSNBRG00000017490	tbrg1	100	89.159	ENSAOCG00000018605	tbrg1	98	89.159	Amphiprion_ocellaris
ENSNBRG00000017490	tbrg1	100	89.159	ENSAPEG00000022443	tbrg1	98	89.159	Amphiprion_percula
ENSNBRG00000017490	tbrg1	100	89.159	ENSATEG00000023537	tbrg1	98	89.159	Anabas_testudineus
ENSNBRG00000017490	tbrg1	100	98.127	ENSACLG00000000281	tbrg1	100	97.899	Astatotilapia_calliptera
ENSNBRG00000017490	tbrg1	93	75.051	ENSAMXG00000008381	tbrg1	89	75.051	Astyanax_mexicanus
ENSNBRG00000017490	tbrg1	100	84.457	ENSCSEG00000002445	tbrg1	98	85.393	Cynoglossus_semilaevis
ENSNBRG00000017490	tbrg1	100	81.192	ENSCVAG00000019626	tbrg1	98	81.192	Cyprinodon_variegatus
ENSNBRG00000017490	tbrg1	98	71.619	ENSDARG00000074996	tbrg1	97	71.850	Danio_rerio
ENSNBRG00000017490	tbrg1	92	48.310	ENSEBUG00000014060	tbrg1	87	48.523	Eptatretus_burgeri
ENSNBRG00000017490	tbrg1	99	78.625	ENSELUG00000017458	tbrg1	97	78.625	Esox_lucius
ENSNBRG00000017490	tbrg1	94	75.686	ENSFHEG00000004283	tbrg1	96	75.686	Fundulus_heteroclitus
ENSNBRG00000017490	tbrg1	100	81.262	ENSGAFG00000000204	tbrg1	98	81.262	Gambusia_affinis
ENSNBRG00000017490	tbrg1	100	98.127	ENSHBUG00000004935	tbrg1	98	98.127	Haplochromis_burtoni
ENSNBRG00000017490	tbrg1	100	78.293	ENSHCOG00000010588	tbrg1	98	78.293	Hippocampus_comes
ENSNBRG00000017490	tbrg1	98	71.215	ENSIPUG00000008697	tbrg1	93	76.522	Ictalurus_punctatus
ENSNBRG00000017490	tbrg1	100	82.836	ENSKMAG00000002775	tbrg1	98	83.769	Kryptolebias_marmoratus
ENSNBRG00000017490	tbrg1	99	85.955	ENSLBEG00000017559	tbrg1	95	86.471	Labrus_bergylta
ENSNBRG00000017490	tbrg1	94	78.715	ENSLOCG00000003093	tbrg1	90	78.715	Lepisosteus_oculatus
ENSNBRG00000017490	tbrg1	100	87.850	ENSMAMG00000000876	tbrg1	98	87.850	Mastacembelus_armatus
ENSNBRG00000017490	tbrg1	100	97.940	ENSMZEG00005013545	tbrg1	91	97.940	Maylandia_zebra
ENSNBRG00000017490	tbrg1	96	83.202	ENSMMOG00000005314	tbrg1	92	82.609	Mola_mola
ENSNBRG00000017490	tbrg1	94	88.956	ENSMALG00000011630	tbrg1	97	88.755	Monopterus_albus
ENSNBRG00000017490	tbrg1	100	96.816	ENSONIG00000005284	tbrg1	98	96.816	Oreochromis_niloticus
ENSNBRG00000017490	tbrg1	100	81.495	ENSORLG00000014519	tbrg1	98	81.495	Oryzias_latipes
ENSNBRG00000017490	tbrg1	100	81.121	ENSORLG00020009567	tbrg1	98	81.121	Oryzias_latipes_hni
ENSNBRG00000017490	tbrg1	100	81.308	ENSORLG00015000448	tbrg1	98	81.308	Oryzias_latipes_hsok
ENSNBRG00000017490	tbrg1	100	83.925	ENSOMEG00000006130	tbrg1	98	83.925	Oryzias_melastigma
ENSNBRG00000017490	tbrg1	96	74.460	ENSPKIG00000012274	tbrg1	88	74.460	Paramormyrops_kingsleyae
ENSNBRG00000017490	tbrg1	100	78.625	ENSPMGG00000015968	tbrg1	98	78.996	Periophthalmus_magnuspinnatus
ENSNBRG00000017490	tbrg1	100	81.818	ENSPFOG00000004279	tbrg1	98	81.818	Poecilia_formosa
ENSNBRG00000017490	tbrg1	100	81.818	ENSPLAG00000001227	tbrg1	99	81.034	Poecilia_latipinna
ENSNBRG00000017490	tbrg1	100	81.633	ENSPMEG00000000955	tbrg1	98	81.633	Poecilia_mexicana
ENSNBRG00000017490	tbrg1	100	81.262	ENSPREG00000005246	tbrg1	98	81.262	Poecilia_reticulata
ENSNBRG00000017490	tbrg1	89	97.899	ENSPNYG00000012625	tbrg1	100	97.899	Pundamilia_nyererei
ENSNBRG00000017490	tbrg1	99	69.403	ENSPNAG00000028332	tbrg1	98	72.000	Pygocentrus_nattereri
ENSNBRG00000017490	tbrg1	95	75.400	ENSSFOG00015009308	tbrg1	85	75.400	Scleropages_formosus
ENSNBRG00000017490	tbrg1	100	85.448	ENSSMAG00000002529	tbrg1	98	85.448	Scophthalmus_maximus
ENSNBRG00000017490	tbrg1	99	90.824	ENSSDUG00000013674	tbrg1	98	90.824	Seriola_dumerili
ENSNBRG00000017490	tbrg1	96	90.820	ENSSLDG00000008932	tbrg1	98	89.648	Seriola_lalandi_dorsalis
ENSNBRG00000017490	tbrg1	87	89.497	ENSSPAG00000004808	tbrg1	98	89.497	Stegastes_partitus
ENSNBRG00000017490	tbrg1	96	80.588	ENSTRUG00000005960	tbrg1	96	81.065	Takifugu_rubripes
ENSNBRG00000017490	tbrg1	100	81.447	ENSXMAG00000001551	tbrg1	98	81.447	Xiphophorus_maculatus