EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017596 (Gene tree)
Gene ID: 102786018
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: double-stranded RNA-binding protein Staufen homolog 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9281 bases
Position: chrJH422277.1:11154843-11164123
Accession: 102786018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000022993	dsrm	PF00035.26	2.5e-45	1	4
ENSNBRP00000022993	dsrm	PF00035.26	2.5e-45	2	4
ENSNBRP00000022993	dsrm	PF00035.26	2.5e-45	3	4
ENSNBRP00000022993	dsrm	PF00035.26	2.5e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023595	-	3417	XM_006783115	ENSNBRP00000022993	692 (aa)	XP_006783178	UPI0003EBD3E1

Gene Model

Click here to download ENSNBRG00000017596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017596	stau1	89	47.235	ENSNBRG00000023829	stau2	99	45.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017596	stau1	96	73.398	ENSG00000124214	STAU1	99	74.052	Homo_sapiens
ENSNBRG00000017596	stau1	100	93.237	ENSAPOG00000017260	stau1	100	93.237	Acanthochromis_polyacanthus
ENSNBRG00000017596	stau1	99	68.580	ENSAMEG00000013681	STAU1	98	68.580	Ailuropoda_melanoleuca
ENSNBRG00000017596	stau1	100	93.381	ENSACIG00000015918	stau1	100	94.388	Amphilophus_citrinellus
ENSNBRG00000017596	stau1	100	93.669	ENSAOCG00000012224	stau1	100	93.669	Amphiprion_ocellaris
ENSNBRG00000017596	stau1	100	93.669	ENSAPEG00000012308	stau1	100	93.669	Amphiprion_percula
ENSNBRG00000017596	stau1	100	93.669	ENSATEG00000024600	stau1	100	93.669	Anabas_testudineus
ENSNBRG00000017596	stau1	99	71.706	ENSAPLG00000010527	STAU1	100	71.607	Anas_platyrhynchos
ENSNBRG00000017596	stau1	99	72.159	ENSACAG00000015909	STAU1	99	72.159	Anolis_carolinensis
ENSNBRG00000017596	stau1	96	72.361	ENSANAG00000032714	STAU1	99	72.361	Aotus_nancymaae
ENSNBRG00000017596	stau1	100	99.711	ENSACLG00000012270	stau1	100	99.711	Astatotilapia_calliptera
ENSNBRG00000017596	stau1	96	80.502	ENSAMXG00000016812	stau1	98	80.502	Astyanax_mexicanus
ENSNBRG00000017596	stau1	96	73.010	ENSBTAG00000000241	STAU1	99	73.010	Bos_taurus
ENSNBRG00000017596	stau1	96	73.204	ENSCJAG00000016233	STAU1	99	73.204	Callithrix_jacchus
ENSNBRG00000017596	stau1	96	70.610	ENSCAFG00000011347	STAU1	99	68.960	Canis_familiaris
ENSNBRG00000017596	stau1	96	68.960	ENSCAFG00020017123	STAU1	99	72.358	Canis_lupus_dingo
ENSNBRG00000017596	stau1	96	72.427	ENSCHIG00000001799	-	99	72.427	Capra_hircus
ENSNBRG00000017596	stau1	96	72.427	ENSTSYG00000036179	-	99	72.427	Carlito_syrichta
ENSNBRG00000017596	stau1	72	72.854	ENSCAPG00000017041	STAU1	99	72.655	Cavia_aperea
ENSNBRG00000017596	stau1	71	71.200	ENSCPOG00000005566	STAU1	99	71.200	Cavia_porcellus
ENSNBRG00000017596	stau1	96	72.361	ENSCCAG00000034339	STAU1	99	72.361	Cebus_capucinus
ENSNBRG00000017596	stau1	96	75.751	ENSCATG00000028474	STAU1	99	75.751	Cercocebus_atys
ENSNBRG00000017596	stau1	71	60.040	ENSCLAG00000002784	-	99	60.040	Chinchilla_lanigera
ENSNBRG00000017596	stau1	71	73.800	ENSCLAG00000006516	-	99	73.800	Chinchilla_lanigera
ENSNBRG00000017596	stau1	72	74.251	ENSCSAG00000014986	STAU1	99	74.251	Chlorocebus_sabaeus
ENSNBRG00000017596	stau1	96	73.450	ENSCHOG00000001511	STAU1	99	73.450	Choloepus_hoffmanni
ENSNBRG00000017596	stau1	99	72.624	ENSCPBG00000026741	STAU1	100	72.011	Chrysemys_picta_bellii
ENSNBRG00000017596	stau1	96	73.592	ENSCANG00000039220	STAU1	99	73.592	Colobus_angolensis_palliatus
ENSNBRG00000017596	stau1	71	69.800	ENSCGRG00001013453	Stau1	99	69.800	Cricetulus_griseus_chok1gshd
ENSNBRG00000017596	stau1	71	69.800	ENSCGRG00000007216	Stau1	99	69.800	Cricetulus_griseus_crigri
ENSNBRG00000017596	stau1	100	77.042	ENSCSEG00000000792	stau1	100	78.028	Cynoglossus_semilaevis
ENSNBRG00000017596	stau1	96	83.037	ENSCVAG00000005906	stau1	100	84.418	Cyprinodon_variegatus
ENSNBRG00000017596	stau1	100	79.770	ENSDARG00000044182	stau1	100	80.691	Danio_rerio
ENSNBRG00000017596	stau1	96	73.450	ENSDNOG00000014933	STAU1	97	73.256	Dasypus_novemcinctus
ENSNBRG00000017596	stau1	71	72.470	ENSDORG00000030220	Stau1	99	72.470	Dipodomys_ordii
ENSNBRG00000017596	stau1	64	75.497	ENSETEG00000018235	STAU1	87	75.497	Echinops_telfairi
ENSNBRG00000017596	stau1	96	72.361	ENSEASG00005023343	STAU1	99	72.361	Equus_asinus_asinus
ENSNBRG00000017596	stau1	96	73.204	ENSECAG00000012894	STAU1	99	73.204	Equus_caballus
ENSNBRG00000017596	stau1	65	76.904	ENSEEUG00000014344	STAU1	68	76.904	Erinaceus_europaeus
ENSNBRG00000017596	stau1	99	82.768	ENSELUG00000002529	stau1	99	84.292	Esox_lucius
ENSNBRG00000017596	stau1	96	71.296	ENSFCAG00000001447	STAU1	99	71.296	Felis_catus
ENSNBRG00000017596	stau1	99	73.104	ENSFALG00000012940	STAU1	100	73.000	Ficedula_albicollis
ENSNBRG00000017596	stau1	71	73.400	ENSFDAG00000014119	-	99	73.400	Fukomys_damarensis
ENSNBRG00000017596	stau1	72	56.287	ENSFDAG00000020837	-	99	55.378	Fukomys_damarensis
ENSNBRG00000017596	stau1	99	88.040	ENSFHEG00000013517	stau1	99	88.040	Fundulus_heteroclitus
ENSNBRG00000017596	stau1	100	73.007	ENSGMOG00000016850	stau1	100	73.007	Gadus_morhua
ENSNBRG00000017596	stau1	99	73.963	ENSGALG00000004736	STAU1	100	73.857	Gallus_gallus
ENSNBRG00000017596	stau1	99	89.049	ENSGAFG00000010437	stau1	99	89.049	Gambusia_affinis
ENSNBRG00000017596	stau1	100	91.053	ENSGACG00000001352	stau1	100	91.053	Gasterosteus_aculeatus
ENSNBRG00000017596	stau1	99	73.391	ENSGAGG00000009825	STAU1	100	72.766	Gopherus_agassizii
ENSNBRG00000017596	stau1	96	68.130	ENSGGOG00000025351	STAU1	99	76.923	Gorilla_gorilla
ENSNBRG00000017596	stau1	100	99.855	ENSHBUG00000023668	stau1	100	99.855	Haplochromis_burtoni
ENSNBRG00000017596	stau1	71	74.696	ENSHGLG00000008730	STAU1	99	74.696	Heterocephalus_glaber_female
ENSNBRG00000017596	stau1	71	74.696	ENSHGLG00100000098	STAU1	99	74.696	Heterocephalus_glaber_male
ENSNBRG00000017596	stau1	100	84.505	ENSHCOG00000018461	stau1	100	84.505	Hippocampus_comes
ENSNBRG00000017596	stau1	100	75.396	ENSIPUG00000023725	stau1	100	75.396	Ictalurus_punctatus
ENSNBRG00000017596	stau1	71	73.279	ENSSTOG00000003634	STAU1	99	73.279	Ictidomys_tridecemlineatus
ENSNBRG00000017596	stau1	71	72.470	ENSJJAG00000020032	Stau1	99	72.470	Jaculus_jaculus
ENSNBRG00000017596	stau1	99	85.899	ENSKMAG00000007135	stau1	99	86.475	Kryptolebias_marmoratus
ENSNBRG00000017596	stau1	100	91.079	ENSLBEG00000020172	stau1	100	91.079	Labrus_bergylta
ENSNBRG00000017596	stau1	98	72.845	ENSLACG00000016157	STAU1	97	72.845	Latimeria_chalumnae
ENSNBRG00000017596	stau1	99	77.842	ENSLOCG00000003134	stau1	100	78.448	Lepisosteus_oculatus
ENSNBRG00000017596	stau1	74	73.541	ENSLAFG00000003238	STAU1	99	73.541	Loxodonta_africana
ENSNBRG00000017596	stau1	96	75.751	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSNBRG00000017596	stau1	96	68.260	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSNBRG00000017596	stau1	96	74.788	ENSMNEG00000033821	STAU1	99	74.788	Macaca_nemestrina
ENSNBRG00000017596	stau1	96	73.398	ENSMLEG00000031383	STAU1	99	73.398	Mandrillus_leucophaeus
ENSNBRG00000017596	stau1	100	93.525	ENSMAMG00000017586	stau1	100	93.703	Mastacembelus_armatus
ENSNBRG00000017596	stau1	100	99.566	ENSMZEG00005015605	stau1	100	99.566	Maylandia_zebra
ENSNBRG00000017596	stau1	99	71.706	ENSMGAG00000004719	STAU1	100	71.607	Meleagris_gallopavo
ENSNBRG00000017596	stau1	71	69.800	ENSMAUG00000013846	Stau1	99	69.800	Mesocricetus_auratus
ENSNBRG00000017596	stau1	96	71.593	ENSMICG00000001995	STAU1	99	71.593	Microcebus_murinus
ENSNBRG00000017596	stau1	71	70.400	ENSMOCG00000018743	Stau1	99	70.400	Microtus_ochrogaster
ENSNBRG00000017596	stau1	100	88.201	ENSMMOG00000015455	stau1	100	88.201	Mola_mola
ENSNBRG00000017596	stau1	96	72.485	ENSMODG00000016276	STAU1	99	72.485	Monodelphis_domestica
ENSNBRG00000017596	stau1	100	92.230	ENSMALG00000000045	stau1	100	92.230	Monopterus_albus
ENSNBRG00000017596	stau1	71	70.876	MGP_CAROLIEiJ_G0024699	Stau1	100	70.876	Mus_caroli
ENSNBRG00000017596	stau1	71	70.876	ENSMUSG00000039536	Stau1	100	70.876	Mus_musculus
ENSNBRG00000017596	stau1	71	70.445	MGP_PahariEiJ_G0026141	Stau1	99	70.445	Mus_pahari
ENSNBRG00000017596	stau1	71	71.341	MGP_SPRETEiJ_G0025619	Stau1	100	71.341	Mus_spretus
ENSNBRG00000017596	stau1	96	70.299	ENSMPUG00000017581	STAU1	99	70.299	Mustela_putorius_furo
ENSNBRG00000017596	stau1	96	72.039	ENSMLUG00000008407	STAU1	97	72.039	Myotis_lucifugus
ENSNBRG00000017596	stau1	71	71.600	ENSNGAG00000007108	Stau1	99	71.600	Nannospalax_galili
ENSNBRG00000017596	stau1	96	73.204	ENSNLEG00000006955	STAU1	99	73.204	Nomascus_leucogenys
ENSNBRG00000017596	stau1	66	79.050	ENSMEUG00000003263	STAU1	80	79.050	Notamacropus_eugenii
ENSNBRG00000017596	stau1	93	69.004	ENSOPRG00000014569	STAU1	96	69.004	Ochotona_princeps
ENSNBRG00000017596	stau1	72	73.653	ENSODEG00000006523	STAU1	99	73.653	Octodon_degus
ENSNBRG00000017596	stau1	100	96.208	ENSONIG00000004152	stau1	99	96.208	Oreochromis_niloticus
ENSNBRG00000017596	stau1	97	72.312	ENSOANG00000006394	STAU1	96	72.206	Ornithorhynchus_anatinus
ENSNBRG00000017596	stau1	96	70.240	ENSOCUG00000006214	STAU1	99	70.240	Oryctolagus_cuniculus
ENSNBRG00000017596	stau1	99	86.455	ENSOMEG00000002388	stau1	99	86.455	Oryzias_melastigma
ENSNBRG00000017596	stau1	72	51.098	ENSOGAG00000028222	-	99	50.600	Otolemur_garnettii
ENSNBRG00000017596	stau1	96	73.398	ENSOGAG00000002127	STAU1	97	73.398	Otolemur_garnettii
ENSNBRG00000017596	stau1	96	72.427	ENSOARG00000012204	STAU1	97	72.427	Ovis_aries
ENSNBRG00000017596	stau1	96	68.130	ENSPPAG00000032023	STAU1	99	76.923	Pan_paniscus
ENSNBRG00000017596	stau1	96	71.481	ENSPPRG00000003436	STAU1	99	74.251	Panthera_pardus
ENSNBRG00000017596	stau1	96	71.481	ENSPTIG00000011768	STAU1	99	73.819	Panthera_tigris_altaica
ENSNBRG00000017596	stau1	96	68.130	ENSPTRG00000023130	STAU1	99	76.923	Pan_troglodytes
ENSNBRG00000017596	stau1	96	75.751	ENSPANG00000020560	STAU1	99	75.751	Papio_anubis
ENSNBRG00000017596	stau1	100	79.315	ENSPKIG00000024588	stau1	100	79.886	Paramormyrops_kingsleyae
ENSNBRG00000017596	stau1	99	73.677	ENSPSIG00000010731	STAU1	99	73.191	Pelodiscus_sinensis
ENSNBRG00000017596	stau1	99	85.222	ENSPMGG00000018553	stau1	100	84.957	Periophthalmus_magnuspinnatus
ENSNBRG00000017596	stau1	71	70.400	ENSPEMG00000022045	Stau1	99	70.400	Peromyscus_maniculatus_bairdii
ENSNBRG00000017596	stau1	99	70.597	ENSPCIG00000023269	STAU1	97	75.146	Phascolarctos_cinereus
ENSNBRG00000017596	stau1	100	87.644	ENSPFOG00000017253	stau1	99	87.770	Poecilia_formosa
ENSNBRG00000017596	stau1	58	84.577	ENSPLAG00000014829	stau1	97	81.282	Poecilia_latipinna
ENSNBRG00000017596	stau1	99	84.029	ENSPMEG00000007495	stau1	99	84.029	Poecilia_mexicana
ENSNBRG00000017596	stau1	100	87.931	ENSPREG00000003477	stau1	99	88.058	Poecilia_reticulata
ENSNBRG00000017596	stau1	96	73.256	ENSPPYG00000011111	STAU1	99	73.256	Pongo_abelii
ENSNBRG00000017596	stau1	70	66.460	ENSPCAG00000002459	STAU1	99	66.460	Procavia_capensis
ENSNBRG00000017596	stau1	96	72.816	ENSPCOG00000027746	STAU1	99	72.816	Propithecus_coquereli
ENSNBRG00000017596	stau1	63	77.483	ENSPVAG00000015019	STAU1	86	77.483	Pteropus_vampyrus
ENSNBRG00000017596	stau1	100	99.855	ENSPNYG00000014436	stau1	100	99.855	Pundamilia_nyererei
ENSNBRG00000017596	stau1	100	79.943	ENSPNAG00000011323	stau1	100	80.830	Pygocentrus_nattereri
ENSNBRG00000017596	stau1	71	70.000	ENSRNOG00000007781	Stau1	99	70.000	Rattus_norvegicus
ENSNBRG00000017596	stau1	72	73.506	ENSRBIG00000037345	STAU1	100	73.307	Rhinopithecus_bieti
ENSNBRG00000017596	stau1	96	74.788	ENSRROG00000039008	STAU1	99	74.788	Rhinopithecus_roxellana
ENSNBRG00000017596	stau1	96	72.361	ENSSBOG00000034448	STAU1	99	72.361	Saimiri_boliviensis_boliviensis
ENSNBRG00000017596	stau1	96	75.775	ENSSHAG00000009492	STAU1	97	75.775	Sarcophilus_harrisii
ENSNBRG00000017596	stau1	100	80.229	ENSSFOG00015021497	stau1	100	80.229	Scleropages_formosus
ENSNBRG00000017596	stau1	100	91.942	ENSSMAG00000017410	stau1	100	91.942	Scophthalmus_maximus
ENSNBRG00000017596	stau1	100	94.245	ENSSDUG00000019439	stau1	100	94.245	Seriola_dumerili
ENSNBRG00000017596	stau1	100	94.532	ENSSLDG00000025040	stau1	100	94.532	Seriola_lalandi_dorsalis
ENSNBRG00000017596	stau1	99	72.908	ENSSPUG00000017983	STAU1	99	72.874	Sphenodon_punctatus
ENSNBRG00000017596	stau1	100	94.245	ENSSPAG00000019275	stau1	100	94.245	Stegastes_partitus
ENSNBRG00000017596	stau1	96	73.204	ENSSSCG00000027444	STAU1	99	73.884	Sus_scrofa
ENSNBRG00000017596	stau1	100	70.856	ENSTGUG00000008784	STAU1	100	70.856	Taeniopygia_guttata
ENSNBRG00000017596	stau1	100	87.338	ENSTRUG00000005837	stau1	100	87.914	Takifugu_rubripes
ENSNBRG00000017596	stau1	97	86.202	ENSTNIG00000014732	stau1	99	86.202	Tetraodon_nigroviridis
ENSNBRG00000017596	stau1	96	62.209	ENSTBEG00000009404	STAU1	99	62.209	Tupaia_belangeri
ENSNBRG00000017596	stau1	66	73.593	ENSTTRG00000004285	STAU1	80	73.593	Tursiops_truncatus
ENSNBRG00000017596	stau1	72	72.835	ENSUAMG00000025449	STAU1	99	72.835	Ursus_americanus
ENSNBRG00000017596	stau1	54	69.792	ENSUMAG00000024475	STAU1	89	69.792	Ursus_maritimus
ENSNBRG00000017596	stau1	96	73.204	ENSVPAG00000001313	STAU1	99	73.204	Vicugna_pacos
ENSNBRG00000017596	stau1	96	69.107	ENSVVUG00000022325	STAU1	99	69.107	Vulpes_vulpes
ENSNBRG00000017596	stau1	97	71.407	ENSXETG00000001783	stau1	96	71.259	Xenopus_tropicalis
ENSNBRG00000017596	stau1	56	84.103	ENSXCOG00000008804	stau1	98	84.359	Xiphophorus_couchianus
ENSNBRG00000017596	stau1	99	88.473	ENSXMAG00000016175	stau1	99	88.473	Xiphophorus_maculatus