EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017646 (Gene tree)
Gene ID: 102779765
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 12425 bases
Position: chrJH422332.1:1594829-1607253
Accession: 102779765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023048	KH_1	PF00013.29	3.5e-54	1	3
ENSNBRP00000023048	KH_1	PF00013.29	3.5e-54	2	3
ENSNBRP00000023048	KH_1	PF00013.29	3.5e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023650	-	2368	XM_006799027	ENSNBRP00000023048	434 (aa)	XP_006799090	UPI0003EC012A

Gene Model

Click here to download ENSNBRG00000017646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017646	zgc:110045	50	38.356	ENSNBRG00000015099	fubp1	64	38.356
ENSNBRG00000017646	zgc:110045	75	66.467	ENSNBRG00000016714	-	97	68.405
ENSNBRG00000017646	zgc:110045	57	44.286	ENSNBRG00000005627	hnrpkl	60	44.286
ENSNBRG00000017646	zgc:110045	61	34.043	ENSNBRG00000005876	KHSRP	61	38.961
ENSNBRG00000017646	zgc:110045	70	31.013	ENSNBRG00000009346	igf2bp1	63	31.013
ENSNBRG00000017646	zgc:110045	52	37.879	ENSNBRG00000023797	khsrp	55	37.879
ENSNBRG00000017646	zgc:110045	96	49.107	ENSNBRG00000007475	pcbp4	99	48.678
ENSNBRG00000017646	zgc:110045	71	71.661	ENSNBRG00000003872	PCBP2	95	71.661
ENSNBRG00000017646	zgc:110045	90	42.188	ENSNBRG00000008100	nova1	60	42.188
ENSNBRG00000017646	zgc:110045	71	70.064	ENSNBRG00000023314	pcbp2	98	67.628
ENSNBRG00000017646	zgc:110045	71	36.986	ENSNBRG00000006751	FUBP3	61	36.986
ENSNBRG00000017646	zgc:110045	72	67.470	ENSNBRG00000016409	-	94	67.470
ENSNBRG00000017646	zgc:110045	70	35.971	ENSNBRG00000016140	igf2bp2b	62	35.971
ENSNBRG00000017646	zgc:110045	99	52.412	ENSNBRG00000015885	-	99	52.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017646	zgc:110045	72	77.316	ENSG00000183570	PCBP3	97	69.429	Homo_sapiens
ENSNBRG00000017646	zgc:110045	73	98.734	ENSAPOG00000023735	zgc:110045	97	98.734	Acanthochromis_polyacanthus
ENSNBRG00000017646	zgc:110045	73	93.088	ENSACIG00000002577	zgc:110045	99	93.088	Amphilophus_citrinellus
ENSNBRG00000017646	zgc:110045	100	97.926	ENSAPEG00000000729	zgc:110045	100	97.926	Amphiprion_percula
ENSNBRG00000017646	zgc:110045	97	91.014	ENSATEG00000011191	zgc:110045	100	91.014	Anabas_testudineus
ENSNBRG00000017646	zgc:110045	100	99.078	ENSACLG00000019285	zgc:110045	100	99.078	Astatotilapia_calliptera
ENSNBRG00000017646	zgc:110045	72	77.316	ENSBTAG00000030775	PCBP3	97	68.857	Bos_taurus
ENSNBRG00000017646	zgc:110045	72	72.892	ENSCAFG00000011907	PCBP3	88	72.892	Canis_familiaris
ENSNBRG00000017646	zgc:110045	72	70.270	ENSCHIG00000015841	PCBP3	87	70.270	Capra_hircus
ENSNBRG00000017646	zgc:110045	52	66.122	ENSTSYG00000005254	PCBP3	95	66.122	Carlito_syrichta
ENSNBRG00000017646	zgc:110045	72	56.231	ENSCAPG00000006767	PCBP3	81	56.231	Cavia_aperea
ENSNBRG00000017646	zgc:110045	72	72.673	ENSCPOG00000003648	PCBP3	89	72.673	Cavia_porcellus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSCCAG00000024561	PCBP3	99	66.087	Cebus_capucinus
ENSNBRG00000017646	zgc:110045	72	77.316	ENSCATG00000038419	PCBP3	88	77.316	Cercocebus_atys
ENSNBRG00000017646	zgc:110045	72	72.673	ENSCLAG00000006667	PCBP3	88	72.673	Chinchilla_lanigera
ENSNBRG00000017646	zgc:110045	72	77.316	ENSCANG00000026757	PCBP3	88	77.316	Colobus_angolensis_palliatus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSCGRG00001006836	Pcbp3	88	72.673	Cricetulus_griseus_chok1gshd
ENSNBRG00000017646	zgc:110045	72	72.673	ENSCGRG00000001837	Pcbp3	88	72.673	Cricetulus_griseus_crigri
ENSNBRG00000017646	zgc:110045	100	93.779	ENSCSEG00000010020	zgc:110045	100	93.779	Cynoglossus_semilaevis
ENSNBRG00000017646	zgc:110045	73	90.431	ENSCVAG00000004726	zgc:110045	93	90.431	Cyprinodon_variegatus
ENSNBRG00000017646	zgc:110045	50	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSNBRG00000017646	zgc:110045	72	72.673	ENSDNOG00000049518	PCBP3	89	72.673	Dasypus_novemcinctus
ENSNBRG00000017646	zgc:110045	54	67.373	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSNBRG00000017646	zgc:110045	72	76.997	ENSEASG00005007068	PCBP3	88	76.997	Equus_asinus_asinus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSECAG00000012413	PCBP3	88	76.997	Equus_caballus
ENSNBRG00000017646	zgc:110045	100	85.355	ENSELUG00000019784	zgc:110045	100	84.668	Esox_lucius
ENSNBRG00000017646	zgc:110045	72	76.997	ENSFCAG00000014812	PCBP3	88	76.997	Felis_catus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSFDAG00000009117	PCBP3	88	76.997	Fukomys_damarensis
ENSNBRG00000017646	zgc:110045	73	93.035	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSNBRG00000017646	zgc:110045	70	92.182	ENSGMOG00000005953	zgc:110045	93	92.182	Gadus_morhua
ENSNBRG00000017646	zgc:110045	73	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSNBRG00000017646	zgc:110045	59	85.204	ENSGAFG00000017860	-	100	85.204	Gambusia_affinis
ENSNBRG00000017646	zgc:110045	72	95.860	ENSGACG00000003044	zgc:110045	97	95.860	Gasterosteus_aculeatus
ENSNBRG00000017646	zgc:110045	72	77.316	ENSGGOG00000003683	PCBP3	88	77.316	Gorilla_gorilla
ENSNBRG00000017646	zgc:110045	73	99.684	ENSHBUG00000012495	zgc:110045	97	99.684	Haplochromis_burtoni
ENSNBRG00000017646	zgc:110045	72	72.673	ENSHGLG00000018620	PCBP3	89	72.673	Heterocephalus_glaber_female
ENSNBRG00000017646	zgc:110045	72	72.673	ENSHGLG00100013590	PCBP3	89	72.673	Heterocephalus_glaber_male
ENSNBRG00000017646	zgc:110045	73	76.833	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSNBRG00000017646	zgc:110045	59	66.540	ENSIPUG00000003932	zgc:110045	97	66.540	Ictalurus_punctatus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSSTOG00000007178	PCBP3	88	72.673	Ictidomys_tridecemlineatus
ENSNBRG00000017646	zgc:110045	72	72.973	ENSJJAG00000021192	Pcbp3	88	72.973	Jaculus_jaculus
ENSNBRG00000017646	zgc:110045	96	82.319	ENSKMAG00000016179	-	95	95.897	Kryptolebias_marmoratus
ENSNBRG00000017646	zgc:110045	73	88.288	ENSLBEG00000023074	zgc:110045	97	88.288	Labrus_bergylta
ENSNBRG00000017646	zgc:110045	69	75.214	ENSLAFG00000020835	PCBP3	96	75.214	Loxodonta_africana
ENSNBRG00000017646	zgc:110045	72	77.316	ENSMFAG00000034574	PCBP3	88	77.316	Macaca_fascicularis
ENSNBRG00000017646	zgc:110045	72	77.316	ENSMMUG00000003825	PCBP3	99	71.517	Macaca_mulatta
ENSNBRG00000017646	zgc:110045	72	77.316	ENSMNEG00000035551	PCBP3	97	77.316	Macaca_nemestrina
ENSNBRG00000017646	zgc:110045	72	77.316	ENSMLEG00000038785	PCBP3	97	69.565	Mandrillus_leucophaeus
ENSNBRG00000017646	zgc:110045	72	97.134	ENSMAMG00000014389	zgc:110045	99	97.134	Mastacembelus_armatus
ENSNBRG00000017646	zgc:110045	100	99.078	ENSMZEG00005011785	zgc:110045	100	99.078	Maylandia_zebra
ENSNBRG00000017646	zgc:110045	71	73.252	ENSMAUG00000007036	Pcbp3	87	73.252	Mesocricetus_auratus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSMICG00000012679	PCBP3	88	76.997	Microcebus_murinus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSMOCG00000016127	Pcbp3	88	72.673	Microtus_ochrogaster
ENSNBRG00000017646	zgc:110045	59	93.194	ENSMMOG00000008398	-	100	93.194	Mola_mola
ENSNBRG00000017646	zgc:110045	72	72.892	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.799	Mus_caroli
ENSNBRG00000017646	zgc:110045	72	72.892	ENSMUSG00000001120	Pcbp3	99	73.799	Mus_musculus
ENSNBRG00000017646	zgc:110045	72	72.892	MGP_PahariEiJ_G0030889	Pcbp3	99	73.799	Mus_pahari
ENSNBRG00000017646	zgc:110045	72	72.892	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.799	Mus_spretus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSMLUG00000003074	PCBP3	88	72.673	Myotis_lucifugus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSNGAG00000005416	Pcbp3	88	72.673	Nannospalax_galili
ENSNBRG00000017646	zgc:110045	72	77.316	ENSNLEG00000002639	PCBP3	88	77.316	Nomascus_leucogenys
ENSNBRG00000017646	zgc:110045	72	66.571	ENSMEUG00000012960	PCBP3	97	66.571	Notamacropus_eugenii
ENSNBRG00000017646	zgc:110045	72	70.270	ENSODEG00000012873	PCBP3	89	70.270	Octodon_degus
ENSNBRG00000017646	zgc:110045	100	94.240	ENSONIG00000010370	zgc:110045	100	94.240	Oreochromis_niloticus
ENSNBRG00000017646	zgc:110045	55	71.875	ENSOANG00000006265	PCBP3	90	71.875	Ornithorhynchus_anatinus
ENSNBRG00000017646	zgc:110045	100	93.318	ENSORLG00000014385	-	100	93.318	Oryzias_latipes
ENSNBRG00000017646	zgc:110045	100	91.705	ENSORLG00020003139	zgc:110045	100	91.935	Oryzias_latipes_hni
ENSNBRG00000017646	zgc:110045	100	94.009	ENSOMEG00000015459	-	100	94.009	Oryzias_melastigma
ENSNBRG00000017646	zgc:110045	72	70.393	ENSOARG00000012704	PCBP3	88	70.393	Ovis_aries
ENSNBRG00000017646	zgc:110045	72	77.316	ENSPPAG00000021940	PCBP3	88	77.316	Pan_paniscus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSPPRG00000003933	PCBP3	88	76.997	Panthera_pardus
ENSNBRG00000017646	zgc:110045	72	62.975	ENSPTIG00000012038	PCBP3	87	63.578	Panthera_tigris_altaica
ENSNBRG00000017646	zgc:110045	72	56.869	ENSPTRG00000014010	PCBP3	97	51.136	Pan_troglodytes
ENSNBRG00000017646	zgc:110045	72	77.316	ENSPANG00000023631	PCBP3	88	77.316	Papio_anubis
ENSNBRG00000017646	zgc:110045	50	58.065	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSNBRG00000017646	zgc:110045	100	75.283	ENSPMGG00000021588	-	99	74.550	Periophthalmus_magnuspinnatus
ENSNBRG00000017646	zgc:110045	72	72.673	ENSPEMG00000000587	Pcbp3	88	72.673	Peromyscus_maniculatus_bairdii
ENSNBRG00000017646	zgc:110045	76	94.277	ENSPFOG00000002348	zgc:110045	100	94.277	Poecilia_formosa
ENSNBRG00000017646	zgc:110045	50	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSNBRG00000017646	zgc:110045	73	96.330	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSNBRG00000017646	zgc:110045	100	92.627	ENSPREG00000001797	zgc:110045	100	92.396	Poecilia_reticulata
ENSNBRG00000017646	zgc:110045	57	69.732	ENSPPYG00000011525	-	94	69.732	Pongo_abelii
ENSNBRG00000017646	zgc:110045	70	58.529	ENSPCAG00000001454	PCBP3	98	58.529	Procavia_capensis
ENSNBRG00000017646	zgc:110045	72	76.997	ENSPCOG00000013797	PCBP3	88	76.997	Propithecus_coquereli
ENSNBRG00000017646	zgc:110045	56	78.788	ENSPVAG00000000832	PCBP3	73	78.788	Pteropus_vampyrus
ENSNBRG00000017646	zgc:110045	73	94.931	ENSPNYG00000004637	zgc:110045	99	94.931	Pundamilia_nyererei
ENSNBRG00000017646	zgc:110045	60	97.959	ENSPNYG00000004656	-	98	97.959	Pundamilia_nyererei
ENSNBRG00000017646	zgc:110045	50	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSNBRG00000017646	zgc:110045	72	77.316	ENSRROG00000034567	PCBP3	88	77.316	Rhinopithecus_roxellana
ENSNBRG00000017646	zgc:110045	72	77.316	ENSSBOG00000005789	PCBP3	88	77.316	Saimiri_boliviensis_boliviensis
ENSNBRG00000017646	zgc:110045	100	95.622	ENSSMAG00000013541	zgc:110045	100	95.622	Scophthalmus_maximus
ENSNBRG00000017646	zgc:110045	97	97.391	ENSSDUG00000019371	zgc:110045	100	97.391	Seriola_dumerili
ENSNBRG00000017646	zgc:110045	100	97.696	ENSSLDG00000021064	zgc:110045	100	97.696	Seriola_lalandi_dorsalis
ENSNBRG00000017646	zgc:110045	73	99.051	ENSSPAG00000000563	zgc:110045	97	99.051	Stegastes_partitus
ENSNBRG00000017646	zgc:110045	72	76.997	ENSSSCG00000023041	PCBP3	88	76.997	Sus_scrofa
ENSNBRG00000017646	zgc:110045	73	93.970	ENSTRUG00000017789	zgc:110045	98	93.970	Takifugu_rubripes
ENSNBRG00000017646	zgc:110045	70	88.421	ENSTNIG00000003546	zgc:110045	94	88.421	Tetraodon_nigroviridis
ENSNBRG00000017646	zgc:110045	54	59.072	ENSTBEG00000011882	-	73	59.072	Tupaia_belangeri
ENSNBRG00000017646	zgc:110045	69	76.449	ENSUAMG00000006491	PCBP3	96	76.449	Ursus_americanus
ENSNBRG00000017646	zgc:110045	72	63.717	ENSUMAG00000025403	PCBP3	88	63.717	Ursus_maritimus
ENSNBRG00000017646	zgc:110045	72	68.000	ENSVVUG00000023862	PCBP3	97	64.286	Vulpes_vulpes
ENSNBRG00000017646	zgc:110045	79	85.714	ENSXCOG00000005968	zgc:110045	96	85.714	Xiphophorus_couchianus
ENSNBRG00000017646	zgc:110045	100	92.857	ENSXMAG00000008030	zgc:110045	100	92.857	Xiphophorus_maculatus