EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017755 (Gene tree)
Gene ID: 102786441
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4503 bases
Position: chrJH422680.1:88931-93433
Accession: 102786441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023182	zf-CCHC	PF00098.23	4.6e-08	1	1
ENSNBRP00000023182	RRM_5	PF13893.6	6.7e-08	1	1
ENSNBRP00000023182	RRM_1	PF00076.22	7.2e-31	1	2
ENSNBRP00000023182	RRM_1	PF00076.22	7.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023790	-	2818	XM_006809851	ENSNBRP00000023182	419 (aa)	XP_006809914	UPI0003EC4A57

Gene Model

Click here to download ENSNBRG00000017755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017755	rbm4.1	66	55.333	ENSNBRG00000012372	rbm4.3	86	54.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017755	rbm4.1	100	90.974	ENSAPOG00000012353	rbm4.1	100	90.974	Acanthochromis_polyacanthus
ENSNBRG00000017755	rbm4.1	100	97.613	ENSACIG00000016482	rbm4.1	100	97.613	Amphilophus_citrinellus
ENSNBRG00000017755	rbm4.1	100	92.162	ENSAOCG00000010915	rbm4.1	100	92.162	Amphiprion_ocellaris
ENSNBRG00000017755	rbm4.1	100	92.162	ENSAPEG00000009494	rbm4.1	100	92.162	Amphiprion_percula
ENSNBRG00000017755	rbm4.1	100	90.974	ENSATEG00000001904	rbm4.1	100	90.974	Anabas_testudineus
ENSNBRG00000017755	rbm4.1	99	47.002	ENSACLG00000007740	-	99	44.731	Astatotilapia_calliptera
ENSNBRG00000017755	rbm4.1	100	99.761	ENSACLG00000007722	rbm4.1	100	99.761	Astatotilapia_calliptera
ENSNBRG00000017755	rbm4.1	100	59.242	ENSAMXG00000036611	rbm4.1	100	62.559	Astyanax_mexicanus
ENSNBRG00000017755	rbm4.1	100	74.224	ENSCSEG00000014365	rbm4.1	100	74.224	Cynoglossus_semilaevis
ENSNBRG00000017755	rbm4.1	99	48.936	ENSCSEG00000014359	-	97	48.086	Cynoglossus_semilaevis
ENSNBRG00000017755	rbm4.1	100	78.385	ENSCVAG00000019349	rbm4.1	100	78.385	Cyprinodon_variegatus
ENSNBRG00000017755	rbm4.1	100	70.213	ENSDARG00000036386	rbm4.1	100	69.740	Danio_rerio
ENSNBRG00000017755	rbm4.1	100	51.415	ENSDARG00000055080	rbm4.2	100	51.878	Danio_rerio
ENSNBRG00000017755	rbm4.1	100	65.802	ENSELUG00000013205	rbm4.1	100	63.761	Esox_lucius
ENSNBRG00000017755	rbm4.1	100	79.147	ENSFHEG00000022926	rbm4.1	100	78.910	Fundulus_heteroclitus
ENSNBRG00000017755	rbm4.1	100	67.371	ENSGMOG00000007464	rbm4.1	100	68.868	Gadus_morhua
ENSNBRG00000017755	rbm4.1	92	51.276	ENSGMOG00000007455	-	96	49.640	Gadus_morhua
ENSNBRG00000017755	rbm4.1	100	77.305	ENSGAFG00000019302	rbm4.1	100	76.832	Gambusia_affinis
ENSNBRG00000017755	rbm4.1	100	77.962	ENSGACG00000000822	rbm4.1	100	77.962	Gasterosteus_aculeatus
ENSNBRG00000017755	rbm4.1	97	49.034	ENSGACG00000000821	-	97	46.620	Gasterosteus_aculeatus
ENSNBRG00000017755	rbm4.1	100	99.761	ENSHBUG00000011610	rbm4.1	100	99.761	Haplochromis_burtoni
ENSNBRG00000017755	rbm4.1	96	71.253	ENSHCOG00000011403	rbm4.1	99	70.660	Hippocampus_comes
ENSNBRG00000017755	rbm4.1	100	49.409	ENSIPUG00000022937	rbm4.2	100	48.956	Ictalurus_punctatus
ENSNBRG00000017755	rbm4.1	100	62.615	ENSIPUG00000022931	rbm4.1	100	63.699	Ictalurus_punctatus
ENSNBRG00000017755	rbm4.1	100	80.378	ENSKMAG00000006556	rbm4.1	100	80.378	Kryptolebias_marmoratus
ENSNBRG00000017755	rbm4.1	100	84.561	ENSLBEG00000019782	rbm4.1	100	84.561	Labrus_bergylta
ENSNBRG00000017755	rbm4.1	99	48.700	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSNBRG00000017755	rbm4.1	100	91.449	ENSMAMG00000001765	rbm4.1	100	91.449	Mastacembelus_armatus
ENSNBRG00000017755	rbm4.1	98	50.591	ENSMAMG00000001760	-	98	48.810	Mastacembelus_armatus
ENSNBRG00000017755	rbm4.1	100	99.761	ENSMZEG00005009205	rbm4.1	100	99.761	Maylandia_zebra
ENSNBRG00000017755	rbm4.1	100	87.707	ENSMMOG00000020479	rbm4.1	100	86.998	Mola_mola
ENSNBRG00000017755	rbm4.1	100	88.599	ENSMALG00000020544	rbm4.1	100	88.599	Monopterus_albus
ENSNBRG00000017755	rbm4.1	98	49.423	ENSMALG00000020557	-	98	48.936	Monopterus_albus
ENSNBRG00000017755	rbm4.1	100	99.761	ENSONIG00000015730	rbm4.1	100	99.761	Oreochromis_niloticus
ENSNBRG00000017755	rbm4.1	100	78.860	ENSORLG00000012496	rbm4.1	100	78.860	Oryzias_latipes
ENSNBRG00000017755	rbm4.1	100	78.860	ENSORLG00020012454	rbm4.1	100	78.860	Oryzias_latipes_hni
ENSNBRG00000017755	rbm4.1	100	79.097	ENSORLG00015013678	rbm4.1	100	79.097	Oryzias_latipes_hsok
ENSNBRG00000017755	rbm4.1	100	79.810	ENSOMEG00000001001	rbm4.1	100	79.810	Oryzias_melastigma
ENSNBRG00000017755	rbm4.1	100	64.953	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSNBRG00000017755	rbm4.1	100	77.541	ENSPFOG00000012675	rbm4.1	100	77.069	Poecilia_formosa
ENSNBRG00000017755	rbm4.1	99	47.837	ENSPFOG00000012685	-	99	45.902	Poecilia_formosa
ENSNBRG00000017755	rbm4.1	100	77.541	ENSPLAG00000018572	rbm4.1	100	77.069	Poecilia_latipinna
ENSNBRG00000017755	rbm4.1	100	77.541	ENSPMEG00000006290	rbm4.1	100	77.069	Poecilia_mexicana
ENSNBRG00000017755	rbm4.1	99	45.913	ENSPREG00000003764	-	87	65.761	Poecilia_reticulata
ENSNBRG00000017755	rbm4.1	100	77.541	ENSPREG00000003724	rbm4.1	100	77.069	Poecilia_reticulata
ENSNBRG00000017755	rbm4.1	100	99.761	ENSPNYG00000004662	rbm4.1	100	99.761	Pundamilia_nyererei
ENSNBRG00000017755	rbm4.1	100	51.163	ENSPNAG00000013057	rbm4.2	100	51.163	Pygocentrus_nattereri
ENSNBRG00000017755	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.000	Pygocentrus_nattereri
ENSNBRG00000017755	rbm4.1	100	64.720	ENSSFOG00015021996	sf1	100	64.019	Scleropages_formosus
ENSNBRG00000017755	rbm4.1	100	85.273	ENSSMAG00000007571	rbm4.1	100	83.610	Scophthalmus_maximus
ENSNBRG00000017755	rbm4.1	100	91.686	ENSSDUG00000003925	rbm4.1	100	91.686	Seriola_dumerili
ENSNBRG00000017755	rbm4.1	97	51.675	ENSSDUG00000003936	-	99	49.292	Seriola_dumerili
ENSNBRG00000017755	rbm4.1	97	49.398	ENSSLDG00000013157	-	99	49.176	Seriola_lalandi_dorsalis
ENSNBRG00000017755	rbm4.1	100	91.686	ENSSLDG00000013147	rbm4.1	100	91.686	Seriola_lalandi_dorsalis
ENSNBRG00000017755	rbm4.1	99	48.926	ENSSPAG00000019046	-	99	46.136	Stegastes_partitus
ENSNBRG00000017755	rbm4.1	100	91.232	ENSSPAG00000019053	rbm4.1	100	93.128	Stegastes_partitus
ENSNBRG00000017755	rbm4.1	99	48.317	ENSTRUG00000013328	-	99	46.244	Takifugu_rubripes
ENSNBRG00000017755	rbm4.1	100	78.860	ENSTRUG00000013334	rbm4.1	100	77.910	Takifugu_rubripes
ENSNBRG00000017755	rbm4.1	78	89.216	ENSTNIG00000004821	rbm4.1	97	92.268	Tetraodon_nigroviridis
ENSNBRG00000017755	rbm4.1	100	77.541	ENSXCOG00000003731	rbm4.1	100	77.069	Xiphophorus_couchianus
ENSNBRG00000017755	rbm4.1	100	77.305	ENSXMAG00000008069	rbm4.1	100	76.832	Xiphophorus_maculatus
ENSNBRG00000017755	rbm4.1	99	67.391	ENSXMAG00000008059	-	86	67.391	Xiphophorus_maculatus