EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017763 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2586 bases
Position: chrJH422680.1:94196-96781
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023215	RRM_5	PF13893.6	6.4e-08	1	1
ENSNBRP00000023215	RRM_1	PF00076.22	3e-30	1	2
ENSNBRP00000023215	RRM_1	PF00076.22	3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023825	-	468	-	ENSNBRP00000023215	155 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000017763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017763	-	50	31.250	ENSNBRG00000006749	srsf3b	51	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017763	-	90	88.489	ENSAPOG00000012375	-	95	88.489	Acanthochromis_polyacanthus
ENSNBRG00000017763	-	100	84.177	ENSACIG00000016472	-	96	84.177	Amphilophus_citrinellus
ENSNBRG00000017763	-	90	89.928	ENSAOCG00000010907	-	95	89.928	Amphiprion_ocellaris
ENSNBRG00000017763	-	90	89.928	ENSAPEG00000009476	-	86	89.928	Amphiprion_percula
ENSNBRG00000017763	-	88	89.781	ENSATEG00000001912	-	90	89.781	Anabas_testudineus
ENSNBRG00000017763	-	94	57.241	ENSAMXG00000032121	rbm4.2	91	57.241	Astyanax_mexicanus
ENSNBRG00000017763	-	90	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSNBRG00000017763	-	90	64.748	ENSCSEG00000007739	-	99	64.748	Cynoglossus_semilaevis
ENSNBRG00000017763	-	90	70.504	ENSDARG00000036386	rbm4.1	88	66.234	Danio_rerio
ENSNBRG00000017763	-	90	60.839	ENSEBUG00000007174	-	88	60.839	Eptatretus_burgeri
ENSNBRG00000017763	-	90	81.295	ENSFHEG00000003483	-	91	81.295	Fundulus_heteroclitus
ENSNBRG00000017763	-	90	79.856	ENSGAFG00000019301	-	91	79.856	Gambusia_affinis
ENSNBRG00000017763	-	90	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSNBRG00000017763	-	99	99.351	ENSHBUG00000011624	-	100	99.351	Haplochromis_burtoni
ENSNBRG00000017763	-	95	76.623	ENSHCOG00000011413	-	91	76.623	Hippocampus_comes
ENSNBRG00000017763	-	90	87.681	ENSLBEG00000019756	-	86	87.681	Labrus_bergylta
ENSNBRG00000017763	-	90	53.571	ENSLACG00000006343	zgc:77262	52	53.571	Latimeria_chalumnae
ENSNBRG00000017763	-	91	61.702	ENSLOCG00000002772	rbm4.1	95	61.702	Lepisosteus_oculatus
ENSNBRG00000017763	-	90	99.270	ENSMZEG00005028160	-	93	99.270	Maylandia_zebra
ENSNBRG00000017763	-	90	53.237	ENSMZEG00005028161	-	77	53.237	Maylandia_zebra
ENSNBRG00000017763	-	94	88.966	ENSMZEG00005009210	-	81	88.966	Maylandia_zebra
ENSNBRG00000017763	-	90	85.507	ENSMMOG00000020484	-	86	85.507	Mola_mola
ENSNBRG00000017763	-	90	68.841	ENSPKIG00000020805	rbm4.1	85	68.841	Paramormyrops_kingsleyae
ENSNBRG00000017763	-	90	64.748	ENSPMGG00000004331	rbm4.1	93	64.748	Periophthalmus_magnuspinnatus
ENSNBRG00000017763	-	90	56.115	ENSPMAG00000003433	rbm4.2	69	56.115	Petromyzon_marinus
ENSNBRG00000017763	-	90	79.710	ENSPLAG00000018569	-	88	79.710	Poecilia_latipinna
ENSNBRG00000017763	-	90	79.710	ENSPMEG00000006278	-	88	79.710	Poecilia_mexicana
ENSNBRG00000017763	-	100	99.355	ENSPNYG00000004649	-	100	99.355	Pundamilia_nyererei
ENSNBRG00000017763	-	95	49.333	ENSSFOG00015018567	zgc:77262	99	49.333	Scleropages_formosus
ENSNBRG00000017763	-	94	83.108	ENSSMAG00000007575	-	95	83.108	Scophthalmus_maximus
ENSNBRG00000017763	-	90	79.137	ENSXCOG00000003730	-	86	79.137	Xiphophorus_couchianus